MSI analysis of invasive intestinal adenocarcinomas with mononucleotide repeats
Genotype . | Mouse ID . | Age (d) . | Sample pair . | Change in allele size (bp) . | . | . | . | . | . | . | . | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
. | . | . | . | D1Mit79 . | mBat-24 . | mBat-26 . | mBat-27* . | mBat-37 . | mBat-59 . | mBat-64 . | mBat-67 . | |||||||
B6 Mlh1−/− | 4934 | 269 | 1 | −2 | 0 | −3 | −2 | 0 | −3, −7 | −7, −11 | −6, −12 | |||||||
(BR × B6)F1 ApcMin/+ | 1851 | 362 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||||||
2012 | 297 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | ND | 0 | ||||||||
2056 | 232 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||||||||
(SWR × B6)F1 ApcMin/+ | 2058 | 530 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||||||
2079 | 536 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −24 | ||||||||
7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ND | ||||||||||
2217 | 520 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −25, −34, −40 | ||||||||
9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||||||||||
2232 | 517 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ND | ||||||||
11 | 0 | 0 | 0 | 0 | 0 | 0 | ND | 0 | ||||||||||
1840 | 601 | 12 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −22, −38 | ||||||||
1888 | 591 | 13 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −30 | ||||||||
1902 | 595 | 14 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −21 | ||||||||
1904 | 595 | 15 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ND | ||||||||
2000 | 571 | 16 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −38 | ||||||||
2001 | 571 | 17 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||||||||
2221 | 533 | 18 | 0 | 0 | 0 | 0 | 0 | −25 | 0 | −15, −26, −35 | ||||||||
19 | 0 | 0 | 0 | 0 | 0 | ND | ND | 0 | ||||||||||
2223 | 533 | 20 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −27, −37 | ||||||||
21 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −12, −20 | ||||||||||
1986 | 579 | 22 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −12, −24, −33 | ||||||||
1885 | 604 | 23 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −18 | ||||||||
1898 | 609 | 24 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −26 | ||||||||
2041 | 578 | 25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||||||||
2047 | 577 | 26 | 0 | 0 | 0 | 0 | 0 | ND | 0 | −21 |
Genotype . | Mouse ID . | Age (d) . | Sample pair . | Change in allele size (bp) . | . | . | . | . | . | . | . | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
. | . | . | . | D1Mit79 . | mBat-24 . | mBat-26 . | mBat-27* . | mBat-37 . | mBat-59 . | mBat-64 . | mBat-67 . | |||||||
B6 Mlh1−/− | 4934 | 269 | 1 | −2 | 0 | −3 | −2 | 0 | −3, −7 | −7, −11 | −6, −12 | |||||||
(BR × B6)F1 ApcMin/+ | 1851 | 362 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||||||
2012 | 297 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | ND | 0 | ||||||||
2056 | 232 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||||||||
(SWR × B6)F1 ApcMin/+ | 2058 | 530 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||||||
2079 | 536 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −24 | ||||||||
7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ND | ||||||||||
2217 | 520 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −25, −34, −40 | ||||||||
9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||||||||||
2232 | 517 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ND | ||||||||
11 | 0 | 0 | 0 | 0 | 0 | 0 | ND | 0 | ||||||||||
1840 | 601 | 12 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −22, −38 | ||||||||
1888 | 591 | 13 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −30 | ||||||||
1902 | 595 | 14 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −21 | ||||||||
1904 | 595 | 15 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ND | ||||||||
2000 | 571 | 16 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −38 | ||||||||
2001 | 571 | 17 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||||||||
2221 | 533 | 18 | 0 | 0 | 0 | 0 | 0 | −25 | 0 | −15, −26, −35 | ||||||||
19 | 0 | 0 | 0 | 0 | 0 | ND | ND | 0 | ||||||||||
2223 | 533 | 20 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −27, −37 | ||||||||
21 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −12, −20 | ||||||||||
1986 | 579 | 22 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −12, −24, −33 | ||||||||
1885 | 604 | 23 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −18 | ||||||||
1898 | 609 | 24 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −26 | ||||||||
2041 | 578 | 25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ||||||||
2047 | 577 | 26 | 0 | 0 | 0 | 0 | 0 | ND | 0 | −21 |
mBat-27 (accession no. L24372) primer sequences were GGGAAGACTGCTTAGGGAAGA and ATTTGGCTTTCAAGCATCCATA (48). The other microsatellite markers were described previously (17).