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Journal Articles

Transcriptional Plasticity Drives Leukemia Immune Escape

Kenneth Eagle, Taku Harada, Jérémie Kalfon, Monika W. Perez, Yaser Heshmati, Jazmin Ewers, Jošt Vrabič Koren, Joshua M. Dempster, Guillaume Kugener, Vikram R. Paralkar, Charles Y. Lin, Neekesh V. Dharia, Kimberly Stegmaier, Stuart H. Orkin, Maxim Pimkin
Journal: Blood Cancer Discovery
Blood Cancer Discov (2022) 3 (5): 394–409.
DOI: https://doi.org/10.1158/2643-3230.BCD-21-0207
Published: 06 September 2022
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Follicular Lymphoma Microenvironment Characteristics Associated with Tumor Cell Mutations and MHC Class II Expression

Guangchun Han, Qing Deng, Mario L. Marques-Piubelli, Enyu Dai, Minghao Dang, Man Chun John Ma, Xubin Li, Haopeng Yang, Jared Henderson, Olga Kudryashova, Mark Meerson, Sergey Isaev, Nikita Kotlov, Krystle J. Nomie, Alexander Bagaev, Edwin R. Parra, Luisa M. Solis Soto, Simrit Parmar, Fredrick B. Hagemeister, Sairah Ahmed, Swaminathan P. Iyer, Felipe Samaniego, Raphael Steiner, Luis Fayad, Hun Lee, Nathan H. Fowler, Christopher R. Flowers, Paolo Strati, Jason R. Westin, Sattva S. Neelapu, Loretta J. Nastoupil, Francisco Vega, Linghua Wang, Michael R. Green
Journal: Blood Cancer Discovery
Blood Cancer Discov (2022) 3 (5): 428–443.
DOI: https://doi.org/10.1158/2643-3230.BCD-21-0075
Published: 06 September 2022
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PU.1-Dependent Enhancer Inhibition Separates Tet2-Deficient Hematopoiesis from Malignant Transformation

Maria M. Aivalioti, Boris A. Bartholdy, Kith Pradhan, Tushar D. Bhagat, Aliona Zintiridou, Jong Jin Jeong, Victor J. Thiruthuvanathan, Mario Pujato, Aditi Paranjpe, Chi Zhang, Ross L. Levine, Aaron D. Viny, Amittha Wickrema, Amit Verma, Britta Will
Journal: Blood Cancer Discovery
Blood Cancer Discov (2022) 3 (5): 444–467.
DOI: https://doi.org/10.1158/2643-3230.BCD-21-0226
Published: 06 September 2022
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Amplified EPOR/JAK2 Genes Define a Unique Subtype of Acute Erythroid Leukemia

June Takeda, Kenichi Yoshida, Masahiro M. Nakagawa, Yasuhito Nannya, Akinori Yoda, Ryunosuke Saiki, Yotaro Ochi, Lanying Zhao, Rurika Okuda, Xingxing Qi, Takuto Mori, Ayana Kon, Kenichi Chiba, Hiroko Tanaka, Yuichi Shiraishi, Ming-Chung Kuo, Cassandra M. Kerr, Yasunobu Nagata, Daisuke Morishita, Nobuhiro Hiramoto, Akira Hangaishi, Hideyuki Nakazawa, Ken Ishiyama, Satoru Miyano, Shigeru Chiba, Yasushi Miyazaki, Toshiyuki Kitano, Kensuke Usuki, Nobuo Sezaki, Hisashi Tsurumi, Shuichi Miyawaki, Jaroslaw P. Maciejewski, Takayuki Ishikawa, Kazuma Ohyashiki, Arnold Ganser, Michael Heuser, Felicitas Thol, Lee-Yung Shih, Akifumi Takaori-Kondo, Hideki Makishima, Seishi Ogawa
Journal: Blood Cancer Discovery
Blood Cancer Discov (2022) 3 (5): 410–427.
DOI: https://doi.org/10.1158/2643-3230.BCD-21-0192
Published: 06 September 2022
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AACR Project GENIE: 100,000 Cases and Beyond

Trevor J. Pugh, Jonathan L. Bell, Jeff P. Bruce, Gary J. Doherty, Matthew Galvin, Michelle F. Green, Haley Hunter-Zinck, Priti Kumari, Michele L. Lenoue-Newton, Marilyn M. Li, James Lindsay, Tali Mazor, Andrea Ovalle, Stephen-John Sammut, Nikolaus Schultz, Thomas V. Yu, Shawn M. Sweeney, Brady Bernard, for the AACR Project GENIE Consortium, Genomics and Analysis Working Group
Journal: Cancer Discovery
Cancer Discov (2022) 12 (9): 2044–2057.
DOI: https://doi.org/10.1158/2159-8290.CD-21-1547
Published: 02 September 2022
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Common Trajectories of Highly Effective CD19-Specific CAR T Cells Identified by Endogenous T-cell Receptor Lineages

Taylor L. Wilson, Hyunjin Kim, Ching-Heng Chou, Deanna Langfitt, Robert C. Mettelman, Anastasia A. Minervina, E. Kaitlynn Allen, Jean-Yves Métais, Mikhail V. Pogorelyy, Janice M. Riberdy, M. Paulina Velasquez, Pratibha Kottapalli, Sanchit Trivedi, Scott R. Olsen, Timothy Lockey, Catherine Willis, Michael M. Meagher, Brandon M. Triplett, Aimee C. Talleur, Stephen Gottschalk, Jeremy Chase Crawford, Paul G. Thomas
Journal: Cancer Discovery
Cancer Discov (2022) 12 (9): 2098–2119.
DOI: https://doi.org/10.1158/2159-8290.CD-21-1508
Published: 02 September 2022
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Alpelisib Monotherapy for PI3K-Altered, Pretreated Advanced Breast Cancer: A Phase II Study

Peter Savas, Louisa L. Lo, Stephen J. Luen, Elizabeth F. Blackley, Jason Callahan, Kate Moodie, Courtney T. van Geelen, Yi-An Ko, Chen-Fang Weng, Lironne Wein, Maria João Silva, Andjelija Zivanovic Bujak, Miriam M. Yeung, Sarah Ftouni, Rodney J. Hicks, Prudence A. Francis, Chee Khoon Lee, Sarah-Jane Dawson, Sherene Loi
Journal: Cancer Discovery
Cancer Discov (2022) 12 (9): 2058–2073.
DOI: https://doi.org/10.1158/2159-8290.CD-21-1696
Published: 02 September 2022
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A Therapeutically Actionable Protumoral Axis of Cytokines Involving IL-8, TNFα, and IL-1β

Irene Olivera, Rebeca Sanz-Pamplona, Elixabet Bolaños, Inmaculada Rodriguez, Iñaki Etxeberria, Assunta Cirella, Josune Egea, Saray Garasa, Itziar Migueliz, Iñaki Eguren-Santamaria, Miguel F. Sanmamed, Javier Glez-Vaz, Arantza Azpilikueta, Maite Alvarez, María C. Ochoa, Beatrice Malacrida, David Propper, Carlos E. de Andrea, Pedro Berraondo, Frances R. Balkwill, Álvaro Teijeira, Ignacio Melero
Journal: Cancer Discovery
Cancer Discov (2022) 12 (9): 2140–2157.
DOI: https://doi.org/10.1158/2159-8290.CD-21-1115
Published: 02 September 2022
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NCOA4-Mediated Ferritinophagy Is a Pancreatic Cancer Dependency via Maintenance of Iron Bioavailability for Iron–Sulfur Cluster Proteins

Naiara Santana-Codina, Maria Quiles del Rey, Kevin S. Kapner, Huan Zhang, Ajami Gikandi, Callum Malcolm, Clara Poupault, Miljan Kuljanin, Kristen M. John, Douglas E. Biancur, Brandon Chen, Nupur K. Das, Kristen E. Lowder, Connor J. Hennessey, Wesley Huang, Annan Yang, Yatrik M. Shah, Jonathan A. Nowak, Andrew J. Aguirre, Joseph D. Mancias
Journal: Cancer Discovery
Cancer Discov (2022) 12 (9): 2180–2197.
DOI: https://doi.org/10.1158/2159-8290.CD-22-0043
Published: 02 September 2022
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Coordinated Transcriptional and Catabolic Programs Support Iron-Dependent Adaptation to RAS–MAPK Pathway Inhibition in Pancreatic Cancer

Mirunalini Ravichandran, Jingjie Hu, Charles Cai, Nathan P. Ward, Anthony Venida, Callum Foakes, Miljan Kuljanin, Annan Yang, Connor J. Hennessey, Yang Yang, Brandon R. Desousa, Gilles Rademaker, Annelot A.L. Staes, Zeynep Cakir, Isha H. Jain, Andrew J. Aguirre, Joseph D. Mancias, Yin Shen, Gina M. DeNicola, Rushika M. Perera
Journal: Cancer Discovery
Cancer Discov (2022) 12 (9): 2198–2219.
DOI: https://doi.org/10.1158/2159-8290.CD-22-0044
Published: 02 September 2022
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Ecologic Analysis of Correlates of Cervical Cancer Morbidity and Mortality in Sub-Saharan Africa

Claire Ruvimbo Gapare, Mariam El-Zein, Harshita Patel, Parker Tope, Eduardo L. Franco
Journal: Cancer Epidemiology, Biomarkers & Prevention
Cancer Epidemiol Biomarkers Prev (2022) 31 (9): 1804–1811.
DOI: https://doi.org/10.1158/1055-9965.EPI-22-0193
Published: 02 September 2022
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eQTL Set–Based Association Analysis Identifies Novel Susceptibility Loci for Barrett Esophagus and Esophageal Adenocarcinoma

Xiaoyu Wang, Puya Gharahkhani, David M. Levine, Rebecca C. Fitzgerald, Ines Gockel, Douglas A. Corley, Harvey A. Risch, Leslie Bernstein, Wong-Ho Chow, Lynn Onstad, Nicholas J. Shaheen, Jesper Lagergren, Laura J. Hardie, Anna H. Wu, Paul D.P. Pharoah, Geoffrey Liu, Lesley A. Anderson, Prasad G. Iyer, Marilie D. Gammon, Carlos Caldas, Weimin Ye, Hugh Barr, Paul Moayyedi, Rebecca Harrison, R.G. Peter Watson, Stephen Attwood, Laura Chegwidden, Sharon B. Love, David MacDonald, John deCaestecker, Hans Prenen, Katja Ott, Susanne Moebus, Marino Venerito, Hauke Lang, Rupert Mayershofer, Michael Knapp, Lothar Veits, Christian Gerges, Josef Weismüller, Matthias Reeh, Markus M. Nöthen, Jakob R. Izbicki, Hendrik Manner, Horst Neuhaus, Thomas Rösch, Anne C. Böhmer, Arnulf H. Hölscher, Mario Anders, Oliver Pech, Brigitte Schumacher, Claudia Schmidt, Thomas Schmidt, Tania Noder, Dietmar Lorenz, Michael Vieth, Andrea May, Timo Hess, Nicole Kreuser, Jessica Becker, Christian Ell, Ian Tomlinson, Claire Palles, Janusz A. Jankowski, David C. Whiteman, Stuart MacGregor, Johannes Schumacher, Thomas L. Vaughan, Matthew F. Buas, James Y. Dai
Journal: Cancer Epidemiology, Biomarkers & Prevention
Cancer Epidemiol Biomarkers Prev (2022) 31 (9): 1735–1745.
DOI: https://doi.org/10.1158/1055-9965.EPI-22-0096
Published: 02 September 2022
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Underutilization of Guideline-Recommended Mismatch Repair/Microsatellite Instability Biomarker Testing in Advanced Colorectal Cancer

David J. Papke, Jr, Neal I. Lindeman, Deborah Schrag, J. Bryan Iorgulescu
Journal: Cancer Epidemiology, Biomarkers & Prevention
Cancer Epidemiol Biomarkers Prev (2022) 31 (9): 1746–1751.
DOI: https://doi.org/10.1158/1055-9965.EPI-22-0279
Published: 02 September 2022
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The Role of Socioeconomic Status and Race/Ethnicity in Malignant Peripheral Nerve Sheath Tumor Survival: A Surveillance, Epidemiology, and End Results–Based Analysis

Allison M. Domingues, Christopher L. Moertel, Erin L. Marcotte
Journal: Cancer Epidemiology, Biomarkers & Prevention
Cancer Epidemiol Biomarkers Prev (2022) 31 (9): 1830–1838.
DOI: https://doi.org/10.1158/1055-9965.EPI-21-0997
Published: 02 September 2022
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Hereditary Hemochromatosis Variant Associations with Incident Nonliver Malignancies: 11-Year Follow-up in UK Biobank

Janice L. Atkins, Luke C. Pilling, Suzy V. Torti, Frank M. Torti, George A. Kuchel, David Melzer
Journal: Cancer Epidemiology, Biomarkers & Prevention
Cancer Epidemiol Biomarkers Prev (2022) 31 (9): 1780–1787.
DOI: https://doi.org/10.1158/1055-9965.EPI-22-0284
Published: 02 September 2022
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Postdiagnostic Inflammatory, Hyperinsulinemic, and Insulin-Resistant Diets and Lifestyles and the Risk of Prostate Cancer Progression and Mortality

Crystal S. Langlais, Rebecca E. Graff, Erin L. Van Blarigan, Stacey A. Kenfield, John Neuhaus, Fred K. Tabung, Janet E. Cowan, Jeanette M. Broering, Peter Carroll, June M. Chan
Journal: Cancer Epidemiology, Biomarkers & Prevention
Cancer Epidemiol Biomarkers Prev (2022) 31 (9): 1760–1768.
DOI: https://doi.org/10.1158/1055-9965.EPI-22-0147
Published: 02 September 2022
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Persistent Disparities in Colorectal Cancer Screening: A Tell-Tale Sign for Implementing New Guidelines in Younger Adults

Po-Hong Liu, Nina N. Sanford, Peter S. Liang, Amit G. Singal, Caitlin C. Murphy
Journal: Cancer Epidemiology, Biomarkers & Prevention
Cancer Epidemiol Biomarkers Prev (2022) 31 (9): 1701–1709.
DOI: https://doi.org/10.1158/1055-9965.EPI-21-1330
Published: 02 September 2022
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Oral Cancer Prevalence, Mortality, and Costs in Medicaid and Commercial Insurance Claims Data

Eric P. Tranby, Lisa J. Heaton, Scott L. Tomar, Abigail L. Kelly, Gulielma Leonard Fager, Mary Backley, Julie Frantsve-Hawley
Journal: Cancer Epidemiology, Biomarkers & Prevention
Cancer Epidemiol Biomarkers Prev (2022) 31 (9): 1849–1857.
DOI: https://doi.org/10.1158/1055-9965.EPI-22-0114
Published: 02 September 2022
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Hispanic Ethnicity Differences in Birth Characteristics, Maternal Birthplace, and Risk of Early-Onset Hodgkin Lymphoma: A Population-Based Case–Control Study

Connor Graham, Catherine Metayer, Libby M. Morimoto, Joseph L. Wiemels, Arfan Siddique, Mengyang Di, Rozalyn L. Rodwin, Nina S. Kadan-Lottick, Xiaomei Ma, Rong Wang
Journal: Cancer Epidemiology, Biomarkers & Prevention
Cancer Epidemiol Biomarkers Prev (2022) 31 (9): 1788–1795.
DOI: https://doi.org/10.1158/1055-9965.EPI-22-0335
Published: 02 September 2022
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Association Study between Polymorphisms in DNA Methylation–Related Genes and Testicular Germ Cell Tumor Risk

Chiara Grasso, Maja Popovic, Elena Isaevska, Fulvio Lazzarato, Valentina Fiano, Daniela Zugna, John Pluta, Benita Weathers, Kurt D'Andrea, Kristian Almstrup, Lynn Anson-Cartwright, D. Timothy Bishop, Stephen J. Chanock, Chu Chen, Victoria K. Cortessis, Marlene D. Dalgaard, Siamak Daneshmand, Alberto Ferlin, Carlo Foresta, Megan N. Frone, Marija Gamulin, Jourik A. Gietema, Mark H. Greene, Tom Grotmol, Robert J. Hamilton, Trine B. Haugen, Russ Hauser, Robert Karlsson, Lambertus A. Kiemeney, Davor Lessel, Patrizia Lista, Ragnhild A. Lothe, Chey Loveday, Coby Meijer, Kevin T. Nead, Jérémie Nsengimana, Rolf I. Skotheim, Clare Turnbull, David J. Vaughn, Fredrik Wiklund, Tongzhang Zheng, Andrea Zitella, Stephen M. Schwartz, Katherine A. McGlynn, Peter A. Kanetsky, Katherine L. Nathanson, Lorenzo Richiardi
Journal: Cancer Epidemiology, Biomarkers & Prevention
Cancer Epidemiol Biomarkers Prev (2022) 31 (9): 1769–1779.
DOI: https://doi.org/10.1158/1055-9965.EPI-22-0123
Published: 02 September 2022
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