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Matt van de Rijn
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Journal Articles

Genomic, Epigenomic, and Transcriptomic Inter- and Intratumor Heterogeneity in Desmoid Tumors

Open Access
Chelsea De Bellis, Sujay Vennam, Christopher Eeles, Pegah Rahimizadeh, Justin Cates, Thomas Stricker, Jenny Hoffman, Kristen Ganjoo, Gregory W. Charville, Benjamin Haibe-Kains, Matt van de Rijn, Joanna Przybyl
Journal: Clinical Cancer Research
Clin Cancer Res (2025) 31 (1): 205–216.
https://doi.org/10.1158/1078-0432.CCR-24-1240
Published: 06 January 2025
View articletitled, Genomic, Epigenomic, and Transcriptomic Inter- and Intratumor Heterogeneity in Desmoid Tumors
Open the PDF for Genomic, Epigenomic, and Transcriptomic Inter- and Intratumor Heterogeneity in Desmoid Tumors in another window
Includes: Supplementary data
Journal Articles

Monitoring Sarcoma Response to Immune Checkpoint Inhibition and Local Cryotherapy with Circulating Tumor DNA Analysis

Available to Purchase
Nam Q. Bui, Neda Nemat-Gorgani, Ajay Subramanian, Ileana A. Torres, Marta Lohman, Timothy J. Sears, Matt van de Rijn, Gregory W. Charville, Hans-Christoph Becker, David S. Wang, Gloria L. Hwang, Kristen N. Ganjoo, Everett J. Moding
Journal: Clinical Cancer Research
Clin Cancer Res (2023) 29 (14): 2612–2620.
https://doi.org/10.1158/1078-0432.CCR-23-0250
Published: 14 July 2023
View articletitled, Monitoring Sarcoma Response to Immune Checkpoint Inhibition and Local Cryotherapy with Circulating Tumor DNA Analysis
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Includes: Supplementary data
Journal Articles

Interactions in CSF1-Driven Tenosynovial Giant Cell Tumors

Open Access
David G.P. van IJzendoorn, Magdalena Matusiak, Gregory W. Charville, Geert Spierenburg, Sushama Varma, Deana R.C. Colburg, Michiel A.J. van de Sande, Kirsten van Langevelde, David G. Mohler, Kristen N. Ganjoo, Nam Q. Bui, Raffi S. Avedian, Judith V.M.G. Bovée, Robert Steffner, Robert B. West, Matt van de Rijn
Journal: Clinical Cancer Research
Clin Cancer Res (2022) 28 (22): 4934–4946.
https://doi.org/10.1158/1078-0432.CCR-22-1898
Published: 14 November 2022
View articletitled, Interactions in CSF1-Driven Tenosynovial Giant Cell Tumors
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Includes: Supplementary data
Journal Articles

Abstract B015: Targeting hexosamine biosynthesis pathway for the treatment of desmoid tumors

Free
Joanna Przybyl, Angela Tolwani, Sushama Varma, Matt van de Rijn
Journal: Clinical Cancer Research
Clin Cancer Res (2022) 28 (18_Supplement): B015.
https://doi.org/10.1158/1557-3265.SARCOMAS22-B015
Published: 15 September 2022
View articletitled, Abstract B015: Targeting hexosamine biosynthesis pathway for the treatment of desmoid tumors
Journal Articles

HAND1 and BARX1 Act as Transcriptional and Anatomic Determinants of Malignancy in Gastrointestinal Stromal Tumor

Available to Purchase
Matthew L. Hemming, Shannon Coy, Jia-Ren Lin, Jessica L. Andersen, Joanna Przybyl, Emanuele Mazzola, Amr H. Abdelhamid Ahmed, Matt van de Rijn, Peter K. Sorger, Scott A. Armstrong, George D. Demetri, Sandro Santagata
Journal: Clinical Cancer Research
Clin Cancer Res (2021) 27 (6): 1706–1719.
https://doi.org/10.1158/1078-0432.CCR-20-3538
Published: 15 March 2021
View articletitled, HAND1 and BARX1 Act as Transcriptional and Anatomic Determinants of Malignancy in Gastrointestinal Stromal Tumor
Open the PDF for HAND1 and BARX1 Act as Transcriptional and Anatomic Determinants of Malignancy in Gastrointestinal Stromal Tumor in another window
Includes: Supplementary data
Journal Articles

Combination Approach for Detecting Different Types of Alterations in Circulating Tumor DNA in Leiomyosarcoma

Free
Joanna Przybyl, Jacob J. Chabon, Lien Spans, Kristen N. Ganjoo, Sujay Vennam, Aaron M. Newman, Erna Forgó, Sushama Varma, Shirley Zhu, Maria Debiec-Rychter, Ash A. Alizadeh, Maximilian Diehn, Matt van de Rijn
Journal: Clinical Cancer Research
Clin Cancer Res (2018) 24 (11): 2688–2699.
https://doi.org/10.1158/1078-0432.CCR-17-3704
Published: 31 May 2018
View articletitled, Combination Approach for Detecting Different Types of Alterations in Circulating Tumor DNA in Leiomyosarcoma
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Includes: Supplementary data
Journal Articles

Abstract A05: Circulating tumor DNA levels correlate with response to treatment in LMS patients

Free
Joanna Przybyl, Jacob J. Chabon, Lien Spans, Kristen Ganjoo, Sujay Vennam, Aaron M. Newman, Erna Forgó, Sushama Varma, Shirley Zhu, Maria Debiec-Rychter, Ash Alizadeh, Maximilian Diehn, Matt van de Rijn
Journal: Clinical Cancer Research
Clin Cancer Res (2018) 24 (2_Supplement): A05.
https://doi.org/10.1158/1557-3265.SARCOMAS17-A05
Published: 15 January 2018
View articletitled, Abstract A05: Circulating tumor DNA levels correlate with response to treatment in LMS patients
Journal Articles

Abstract B16: Dystrophin is a tumor suppressor in peripheral nerve sheath tumors

Free
Inga-Marie Schaefer, Armelle Dufresne, Nacef Bahri, Marije A. J. de Rooij, Stacy M. Yanofsky, Yuexiang Wang, Chandrajit P. Raut, Laurence H. Baker, Adrian Marino-Enriquez, Matt van de Rijn, Jonathan A. Fletcher
Journal: Clinical Cancer Research
Clin Cancer Res (2018) 24 (2_Supplement): B16.
https://doi.org/10.1158/1557-3265.SARCOMAS17-B16
Published: 15 January 2018
View articletitled, Abstract B16: Dystrophin is a tumor suppressor in peripheral nerve sheath tumors
Journal Articles

Clinically Relevant Molecular Subtypes in Leiomyosarcoma

Free
Xiangqian Guo, Vickie Y. Jo, Anne M. Mills, Shirley X. Zhu, Cheng-Han Lee, Inigo Espinosa, Marisa R. Nucci, Sushama Varma, Erna Forgó, Trevor Hastie, Sharon Anderson, Kristen Ganjoo, Andrew H. Beck, Robert B. West, Christopher D. Fletcher, Matt van de Rijn
Journal: Clinical Cancer Research
Series: Author Choice
Clin Cancer Res (2015) 21 (15): 3501–3511.
https://doi.org/10.1158/1078-0432.CCR-14-3141
Published: 02 August 2015
View articletitled, Clinically Relevant Molecular Subtypes in Leiomyosarcoma
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Includes: Supplementary data
Journal Articles

Stromal Responses among Carcinomas—Response

Free
Robert B. West, Matt van de Rijn, Julia L. Chen
Journal: Clinical Cancer Research
Clin Cancer Res (2014) 20 (5): 1397.
https://doi.org/10.1158/1078-0432.CCR-13-3238
Published: 02 March 2014
View articletitled, Stromal Responses among Carcinomas—Response
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Journal Articles

Stromal Responses among Common Carcinomas Correlated with Clinicopathologic Features

Free
Julia L-Y. Chen, Iñigo Espinosa, Albert Y. Lin, Olivia Y-W. Liao, Matt van de Rijn, Robert B. West
Journal: Clinical Cancer Research
Clin Cancer Res (2013) 19 (18): 5127–5135.
https://doi.org/10.1158/1078-0432.CCR-12-3127
Published: 16 September 2013
View articletitled, Stromal Responses among Common Carcinomas Correlated with Clinicopathologic Features
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Includes: Supplementary data
Journal Articles

Endogenous Versus Tumor-Specific Host Response to Breast Carcinoma: A Study of Stromal Response in Synchronous Breast Primaries and Biopsy Site Changes

Free
Julie M. Wu, Andrew H. Beck, Lisa L. Pate, Daniela Witten, Shirley X. Zhu, Kelli D. Montgomery, Kimberly H. Allison, Matt van de Rijn, Robert B. West
Journal: Clinical Cancer Research
Clin Cancer Res (2011) 17 (3): 437–446.
https://doi.org/10.1158/1078-0432.CCR-10-1709
Published: 01 February 2011
View articletitled, Endogenous Versus Tumor-Specific Host Response to Breast Carcinoma: A Study of Stromal Response in Synchronous Breast Primaries and Biopsy Site Changes
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Journal Articles

The Macrophage Colony-Stimulating Factor 1 Response Signature in Breast Carcinoma

Free
Andrew H. Beck, Inigo Espinosa, Badreddin Edris, Rui Li, Kelli Montgomery, Shirley Zhu, Sushama Varma, Robert J. Marinelli, Matt van de Rijn, Robert B. West
Journal: Clinical Cancer Research
Clin Cancer Res (2009) 15 (3): 778–787.
https://doi.org/10.1158/1078-0432.CCR-08-1283
Published: 02 February 2009
View articletitled, The Macrophage Colony-Stimulating Factor 1 Response Signature in Breast Carcinoma
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Includes: Supplementary data
Journal Articles

Immunohistochemical and Biogenetic Features of Diffuse-Type Tenosynovial Giant Cell Tumors: The Potential Roles of Cyclin A, P53, and Deletion of 15q in Sarcomatous Transformation

Free
Hsuan-Ying Huang, Robert B. West, Ching-Cherng Tzeng, Matt van de Rijn, Jun-Wen Wang, Shih-Cheng Chou, Wen-Wei Huang, Hock-Liew Eng, Ching-Nan Lin, Shih-Chen Yu, Jing-Mei Wu, Chiu-Chin Lu, Chien-Feng Li
Journal: Clinical Cancer Research
Clin Cancer Res (2008) 14 (19): 6023–6032.
https://doi.org/10.1158/1078-0432.CCR-08-0252
Published: 30 September 2008
View articletitled, Immunohistochemical and Biogenetic Features of Diffuse-Type Tenosynovial Giant Cell Tumors: The Potential Roles of Cyclin A, P53, and Deletion of 15q in Sarcomatous Transformation
Open the PDF for Immunohistochemical and Biogenetic Features of Diffuse-Type Tenosynovial Giant Cell Tumors: The Potential Roles of Cyclin A, P53, and Deletion of 15q in Sarcomatous Transformation in another window
Journal Articles

Prognostic Significance of Macrophage Infiltration in Leiomyosarcomas

Free
Cheng-Han Lee, Inigo Espinosa, Suzan Vrijaldenhoven, Subbaya Subramanian, Kelli D. Montgomery, Shirley Zhu, Robert J. Marinelli, Johannes L. Peterse, Neal Poulin, Torsten O. Nielsen, Rob B. West, C. Blake Gilks, Matt van de Rijn
Journal: Clinical Cancer Research
Clin Cancer Res (2008) 14 (5): 1423–1430.
https://doi.org/10.1158/1078-0432.CCR-07-1712
Published: 03 March 2008
View articletitled, Prognostic Significance of Macrophage Infiltration in Leiomyosarcomas
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Includes: Supplementary data
Journal Articles

Hierarchical Clustering Analysis of Tissue Microarray Immunostaining Data Identifies Prognostically Significant Groups of Breast Carcinoma

Free
Nikita A. Makretsov, David G. Huntsman, Torsten O. Nielsen, Erika Yorida, Michael Peacock, Maggie C. U. Cheang, Sandra E. Dunn, Malcolm Hayes, Matt van de Rijn, Chris Bajdik, C. Blake Gilks
Journal: Clinical Cancer Research
Clin Cancer Res (2004) 10 (18): 6143–6151.
https://doi.org/10.1158/1078-0432.CCR-04-0429
Published: 24 September 2004
View articletitled, Hierarchical Clustering Analysis of Tissue Microarray Immunostaining Data Identifies Prognostically Significant Groups of Breast Carcinoma
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Journal Articles

Immunohistochemical and Clinical Characterization of the Basal-Like Subtype of Invasive Breast Carcinoma

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Torsten O. Nielsen, Forrest D. Hsu, Kristin Jensen, Maggie Cheang, Gamze Karaca, Zhiyuan Hu, Tina Hernandez-Boussard, Chad Livasy, Dave Cowan, Lynn Dressler, Lars A. Akslen, Joseph Ragaz, Allen M. Gown, C. Blake Gilks, Matt van de Rijn, Charles M. Perou
Journal: Clinical Cancer Research
Clin Cancer Res (2004) 10 (16): 5367–5374.
https://doi.org/10.1158/1078-0432.CCR-04-0220
Published: 24 August 2004
View articletitled, Immunohistochemical and Clinical Characterization of the Basal-Like Subtype of Invasive Breast Carcinoma
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