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Journal Articles

SJPedPanel: A Pan-Cancer Gene Panel for Childhood Malignancies to Enhance Cancer Monitoring and Early Detection

Pandurang Kolekar, Vidya Balagopal, Li Dong, Yanling Liu, Scott Foy, Quang Tran, Heather Mulder, Anna L.W. Huskey, Emily Plyler, Zhikai Liang, Jingqun Ma, Joy Nakitandwe, Jiali Gu, Maria Namwanje, Jamie Maciaszek, Debbie Payne-Turner, Saradhi Mallampati, Lu Wang, John Easton, Jeffery M. Klco, Xiaotu Ma
Journal: Clinical Cancer Research
Clin Cancer Res (2024) 30 (18): 4100–4114.
https://doi.org/10.1158/1078-0432.CCR-24-1063
Published: 13 September 2024
View article titled, SJPedPanel: A Pan-Cancer Gene Panel for Childhood Malignancies to Enhance Cancer Monitoring and Early Detection
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Includes: Supplementary data
Journal Articles

Urinary Tumor DNA MRD Analysis to Identify Responders to Neoadjuvant Immunotherapy in Muscle-invasive Bladder Cancer

Ruiyun Zhang, Jingyu Zang, Di Jin, Feng Xie, Akezhouli Shahatiaili, Guangyu Wu, Lu Zhang, Lu Wang, Yue Zhang, Zhixin Zhao, Pan Du, Shidong Jia, Jinhai Fan, Guanglei Zhuang, Haige Chen
Journal: Clinical Cancer Research
Clin Cancer Res (2023) 29 (20): 4040–4046.
https://doi.org/10.1158/1078-0432.CCR-23-0513
Published: 13 October 2023
View article titled, Urinary Tumor DNA MRD Analysis to Identify Responders to Neoadjuvant Immunotherapy in Muscle-invasive Bladder Cancer
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Includes: Supplementary data
Journal Articles

TOP2B Enzymatic Activity on Promoters and Introns Modulates Multiple Oncogenes in Human Gliomas

Edgar Gonzalez-Buendia, Junfei Zhao, Lu Wang, Subhas Mukherjee, Daniel Zhang, Víctor A. Arrieta, Eric Feldstein, J. Robert Kane, Seong Jae Kang, Catalina Lee-Chang, Aayushi Mahajan, Li Chen, Ronald Realubit, Charles Karan, Lisa Magnuson, Craig Horbinski, Stacy A. Marshall, Jann N. Sarkaria, Ahmed Mohyeldin, Ichiro Nakano, Mukesh Bansal, Charles D. James, Daniel J. Brat, Atique Ahmed, Peter Canoll, Raul Rabadan, Ali Shilatifard, Adam M. Sonabend
Journal: Clinical Cancer Research
Clin Cancer Res (2021) 27 (20): 5669–5680.
https://doi.org/10.1158/1078-0432.CCR-21-0312
Published: 15 October 2021
View article titled, TOP2B Enzymatic Activity on Promoters and Introns Modulates Multiple Oncogenes in Human Gliomas
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Journal Articles

Low-Dose Metformin Reprograms the Tumor Immune Microenvironment in Human Esophageal Cancer: Results of a Phase II Clinical Trial

Shuhong Wang, Yusheng Lin, Xiao Xiong, Lu Wang, Yi Guo, Yuping Chen, Shaobin Chen, Geng Wang, Peng Lin, Hongcai Chen, Sai-Ching Jim Yeung, Edwin Bremer, Hao Zhang
Journal: Clinical Cancer Research
Clin Cancer Res (2020) 26 (18): 4921–4932.
https://doi.org/10.1158/1078-0432.CCR-20-0113
Published: 15 September 2020
View article titled, Low-Dose Metformin Reprograms the Tumor Immune Microenvironment in Human Esophageal Cancer: Results of a Phase II Clinical Trial
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Includes: Supplementary data
Journal Articles

Clinical Genomic Sequencing of Pediatric and Adult Osteosarcoma Reveals Distinct Molecular Subsets with Potentially Targetable Alterations

Yoshiyuki Suehara, Deepu Alex, Anita Bowman, Sumit Middha, Ahmet Zehir, Debyani Chakravarty, Lu Wang, George Jour, Khedoudja Nafa, Takuo Hayashi, Achim A. Jungbluth, Denise Frosina, Emily Slotkin, Neerav Shukla, Paul Meyers, John H. Healey, Meera Hameed, Marc Ladanyi
Journal: Clinical Cancer Research
Clin Cancer Res (2019) 25 (21): 6346–6356.
https://doi.org/10.1158/1078-0432.CCR-18-4032
Published: 01 November 2019
View article titled, Clinical Genomic Sequencing of Pediatric and Adult Osteosarcoma Reveals Distinct Molecular Subsets with Potentially Targetable Alterations
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Includes: Supplementary data
Journal Articles

USP7 Cooperates with NOTCH1 to Drive the Oncogenic Transcriptional Program in T-Cell Leukemia

Qi Jin, Carlos A. Martinez, Kelly M. Arcipowski, Yixing Zhu, Blanca T. Gutierrez-Diaz, Kenneth K. Wang, Megan R. Johnson, Andrew G. Volk, Feng Wang, Jian Wu, Charles Grove, Hui Wang, Ivan Sokirniy, Paul M. Thomas, Young Ah Goo, Nebiyu A. Abshiru, Nobuko Hijiya, Sofie Peirs, Niels Vandamme, Geert Berx, Steven Goosens, Stacy A. Marshall, Emily J. Rendleman, Yoh-hei Takahashi, Lu Wang, Radhika Rawat, Elizabeth T. Bartom, Clayton K. Collings, Pieter Van Vlierberghe, Alexandros Strikoudis, Stephen Kelly, Beatrix Ueberheide, Christine Mantis, Irawati Kandela, Jean-Pierre Bourquin, Beat Bornhauser, Valentina Serafin, Silvia Bresolin, Maddalena Paganin, Benedetta Accordi, Giuseppe Basso, Neil L. Kelleher, Joseph Weinstock, Suresh Kumar, John D. Crispino, Ali Shilatifard, Panagiotis Ntziachristos
Journal: Clinical Cancer Research
Series: Author Choice
Clin Cancer Res (2019) 25 (1): 222–239.
https://doi.org/10.1158/1078-0432.CCR-18-1740
Published: 01 January 2019
View article titled, USP7 Cooperates with NOTCH1 to Drive the Oncogenic Transcriptional Program in T-Cell Leukemia
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Includes: Supplementary data
Journal Articles

Abstract A21: Modeling of oncogenic chromosomal translocations of aggressive fusion-positive sarcomas by CRISPR-Cas9 genomic engineering

Lee Spraggon, Luciano Martelotto, Julija Hmeljak, Tyler Hitchman, Jiang Wang, Lu Wang, Emily Slotkin, Pang-Dian Fan, Jorge Reis-Filho, Marc Ladanyi
Journal: Clinical Cancer Research
Clin Cancer Res (2018) 24 (2_Supplement): A21.
https://doi.org/10.1158/1557-3265.SARCOMAS17-A21
Published: 15 January 2018
View article titled, Abstract A21: Modeling of oncogenic chromosomal translocations of aggressive fusion-positive sarcomas by CRISPR-Cas9 genomic engineering
Journal Articles

Genetic Heterogeneity in Therapy-Naïve Synchronous Primary Breast Cancers and Their Metastases

Charlotte K.Y. Ng, Francois-Clement Bidard, Salvatore Piscuoglio, Felipe C. Geyer, Raymond S. Lim, Ino de Bruijn, Ronglai Shen, Fresia Pareja, Samuel H. Berman, Lu Wang, Jean-Yves Pierga, Anne Vincent-Salomon, Agnes Viale, Larry Norton, Brigitte Sigal, Britta Weigelt, Paul Cottu, Jorge S. Reis-Filho
Journal: Clinical Cancer Research
Clin Cancer Res (2017) 23 (15): 4402–4415.
https://doi.org/10.1158/1078-0432.CCR-16-3115
Published: 01 August 2017
View article titled, Genetic Heterogeneity in Therapy-Naïve Synchronous Primary Breast Cancers and Their Metastases
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Includes: Supplementary data
Journal Articles

Comprehensive Molecular Characterization of Salivary Duct Carcinoma Reveals Actionable Targets and Similarity to Apocrine Breast Cancer

Martin G. Dalin, Alexis Desrichard, Nora Katabi, Vladimir Makarov, Logan A. Walsh, Ken-Wing Lee, Qingguo Wang, Joshua Armenia, Lyndsay West, Snjezana Dogan, Lu Wang, Deepa Ramaswami, Alan L. Ho, Ian Ganly, David B. Solit, Michael F. Berger, Nikolaus D. Schultz, Jorge S. Reis-Filho, Timothy A. Chan, Luc G.T. Morris
Journal: Clinical Cancer Research
Clin Cancer Res (2016) 22 (18): 4623–4633.
https://doi.org/10.1158/1078-0432.CCR-16-0637
Published: 15 September 2016
View article titled, Comprehensive Molecular Characterization of Salivary Duct Carcinoma Reveals Actionable Targets and Similarity to Apocrine Breast Cancer
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Includes: Supplementary data
Journal Articles

A Novel Crizotinib-Resistant Solvent-Front Mutation Responsive to Cabozantinib Therapy in a Patient with ROS1-Rearranged Lung Cancer

Alexander Drilon, Romel Somwar, Jacob P. Wagner, Nadeem A. Vellore, Christopher A. Eide, Matthew S. Zabriskie, Maria E. Arcila, Jaclyn F. Hechtman, Lu Wang, Roger S. Smith, Mark G. Kris, Gregory J. Riely, Brian J. Druker, Thomas O'Hare, Marc Ladanyi, Monika A. Davare
Journal: Clinical Cancer Research
Clin Cancer Res (2016) 22 (10): 2351–2358.
https://doi.org/10.1158/1078-0432.CCR-15-2013
Published: 12 May 2016
View article titled, A Novel Crizotinib-Resistant Solvent-Front Mutation Responsive to Cabozantinib Therapy in a Patient with <em>ROS1</em>-Rearranged Lung Cancer
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Includes: Supplementary data
Journal Articles

Broad, Hybrid Capture–Based Next-Generation Sequencing Identifies Actionable Genomic Alterations in Lung Adenocarcinomas Otherwise Negative for Such Alterations by Other Genomic Testing Approaches

Alexander Drilon, Lu Wang, Maria E. Arcila, Sohail Balasubramanian, Joel R. Greenbowe, Jeffrey S. Ross, Phil Stephens, Doron Lipson, Vincent A. Miller, Mark G. Kris, Marc Ladanyi, Naiyer A. Rizvi
Journal: Clinical Cancer Research
Series: Author Choice
Clin Cancer Res (2015) 21 (16): 3631–3639.
https://doi.org/10.1158/1078-0432.CCR-14-2683
Published: 13 August 2015
View article titled, Broad, Hybrid Capture–Based Next-Generation Sequencing Identifies Actionable Genomic Alterations in Lung Adenocarcinomas Otherwise Negative for Such Alterations by Other Genomic Testing Approaches
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Includes: Supplementary data
Journal Articles

Abstract B10: Acquired resistance to afatinib plus cetuximab in EGFR-mutant lung adenocarcinoma may be mediated by EGFR overexpression and overcome by the mutant-specific EGFR inhibitor, AZD9291.

Catherine B. Meador, Hailing Jin, Elisa de Stanchina, Valentina Pirazzoli, Marc Ladanyi, Lu Wang, Xi Chen, Rosana Eisenberg, Darren Cross, William Pao
Journal: Clinical Cancer Research
Clin Cancer Res (2014) 20 (2_Supplement): B10.
https://doi.org/10.1158/1078-0432.14AACRIASLC-B10
Published: 16 January 2014
View article titled, Abstract B10: Acquired resistance to afatinib plus cetuximab in EGFR-mutant lung adenocarcinoma may be mediated by EGFR overexpression and overcome by the mutant-specific EGFR inhibitor, AZD9291.
Journal Articles

Identification of KIF5B-RET and GOPC-ROS1 Fusions in Lung Adenocarcinomas through a Comprehensive mRNA-Based Screen for Tyrosine Kinase Fusions

Yoshiyuki Suehara, Maria Arcila, Lu Wang, Adnan Hasanovic, Daphne Ang, Tatsuo Ito, Yuki Kimura, Alexander Drilon, Udayan Guha, Valerie Rusch, Mark G. Kris, Maureen F. Zakowski, Naiyer Rizvi, Raya Khanin, Marc Ladanyi
Journal: Clinical Cancer Research
Clin Cancer Res (2012) 18 (24): 6599–6608.
https://doi.org/10.1158/1078-0432.CCR-12-0838
Published: 16 December 2012
View article titled, Identification of <em>KIF5B-RET</em> and <em>GOPC-ROS1</em> Fusions in Lung Adenocarcinomas through a Comprehensive mRNA-Based Screen for Tyrosine Kinase Fusions
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Includes: Supplementary data
Journal Articles

Depletion of Tumor-Associated Macrophages Enhances the Effect of Sorafenib in Metastatic Liver Cancer Models by Antimetastatic and Antiangiogenic Effects

Wei Zhang, Xiao-Dong Zhu, Hui-Chuan Sun, Yu-Quan Xiong, Peng-Yuan Zhuang, Hua-Xiang Xu, Ling-Qun Kong, Lu Wang, Wei-Zhong Wu, Zhao-You Tang
Journal: Clinical Cancer Research
Clin Cancer Res (2010) 16 (13): 3420–3430.
https://doi.org/10.1158/1078-0432.CCR-09-2904
Published: 30 June 2010
View article titled, Depletion of Tumor-Associated Macrophages Enhances the Effect of Sorafenib in Metastatic Liver Cancer Models by Antimetastatic and Antiangiogenic Effects
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Includes: Supplementary data
Journal Articles

Human Hepatocellular Carcinoma Tumor–derived Endothelial Cells Manifest Increased Angiogenesis Capability and Drug Resistance Compared with Normal Endothelial Cells

Yu-Quan Xiong, Hui-Chuan Sun, Wei Zhang, Xiao-Dong Zhu, Peng-Yuan Zhuang, Ju-Bo Zhang, Lu Wang, Wei-zhong Wu, Lun-Xiu Qin, Zhao-You Tang
Journal: Clinical Cancer Research
Clin Cancer Res (2009) 15 (15): 4838–4846.
https://doi.org/10.1158/1078-0432.CCR-08-2780
Published: 29 July 2009
View article titled, Human Hepatocellular Carcinoma Tumor–derived Endothelial Cells Manifest Increased Angiogenesis Capability and Drug Resistance Compared with Normal Endothelial Cells
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Includes: Supplementary data
Journal Articles

Gene Expression Profiling Reveals Potential Biomarkers of Human Hepatocellular Carcinoma

Hu-Liang Jia, Qing-Hai Ye, Lun-Xiu Qin, Anuradha Budhu, Marshonna Forgues, Yidong Chen, Yin-Kun Liu, Hui-Chuan Sun, Lu Wang, Hong-Zhou Lu, Fang Shen, Zhao-You Tang, Xin Wei Wang
Journal: Clinical Cancer Research
Clin Cancer Res (2007) 13 (4): 1133–1139.
https://doi.org/10.1158/1078-0432.CCR-06-1025
Published: 22 February 2007
View article titled, Gene Expression Profiling Reveals Potential Biomarkers of Human Hepatocellular Carcinoma
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Includes: Supplementary data
Journal Articles

Overexpression of Platelet-Derived Growth Factor Receptor α in Endothelial Cells of Hepatocellular Carcinoma Associated with High Metastatic Potential

Ti Zhang, Hui-Chuan Sun, Yang Xu, Ke-Zhi Zhang, Lu Wang, Lun-Xiu Qin, Wei-Zhong Wu, Yin-Kun Liu, Sheng-Long Ye, Zhao-You Tang
Journal: Clinical Cancer Research
Clin Cancer Res (2005) 11 (24): 8557–8563.
https://doi.org/10.1158/1078-0432.CCR-05-0944
Published: 16 December 2005
View article titled, Overexpression of Platelet-Derived Growth Factor Receptor α in Endothelial Cells of Hepatocellular Carcinoma Associated with High Metastatic Potential
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