Background:

The 5-year mortality rate for pancreatic cancer is among the highest of all cancers. Greater understanding of underlying causes could inform population-wide intervention strategies for prevention. Summary genetic data from genome-wide association studies (GWAS) have become available for thousands of phenotypes. These data can be exploited in Mendelian randomization (MR) phenome-wide association studies (PheWAS) to efficiently screen the phenome for potential determinants of disease risk.

Methods:

We conducted an MR-PheWAS of pancreatic cancer using 486 phenotypes, proxied by 9,124 genetic variants, and summary genetic data from a GWAS of pancreatic cancer (7,110 cancer cases, 7,264 controls). ORs and 95% confidence intervals per 1 SD increase in each phenotype were generated.

Results:

We found evidence that previously reported risk factors of body mass index (BMI; 1.46; 1.20–1.78) and hip circumference (1.42; 1.21–1.67) were associated with pancreatic cancer. We also found evidence of novel associations with metabolites that have not previously been implicated in pancreatic cancer: ADpSGEGDFXAEGGGVR*, a fibrinogen-cleavage peptide (1.60; 1.31–1.95), and O-sulfo-l-tyrosine (0.58; 0.46–0.74). An inverse association was also observed with lung adenocarcinoma (0.63; 0.54–0.74).

Conclusions:

Markers of adiposity (BMI and hip circumference) are potential intervention targets for pancreatic cancer prevention. Further clarification of the causal relevance of the fibrinogen-cleavage peptides and O-sulfo-l-tyrosine in pancreatic cancer etiology is required, as is the basis of our observed association with lung adenocarcinoma.

Impact:

For pancreatic cancer, MR-PheWAS can augment existing risk factor knowledge and generate novel hypotheses to investigate.

People diagnosed with pancreatic cancer have a very poor prognosis, with a less than 5% 5-year survival rate (http://globocan.iarc.fr); symptoms do not manifest until the cancer is at an advanced stage and the disease is rarely detected early. Greater understanding of the etiology of pancreatic cancer could reduce its burden by informing whole-population or risk-stratified prevention strategies.

Risk factors previously reported for pancreatic cancer include cigarette smoking (1), type II diabetes (2), adiposity (3), and chronic pancreatitis (4). However, these reports are based on observational epidemiologic studies, which are prone to unmeasured or residual confounding and reverse causation, precluding robust causal inference. Furthermore, conventional epidemiologic studies often test a narrow set of hypotheses using prior subject knowledge, typically based on other observational studies. While essential, these approaches can constrict a field of research, and preoccupation with previously hypothesized risk factors can prevent both the identification of novel risk factors and prioritization of causal associations (5).

Mendelian randomization (MR) is a well-established type of instrumental variable (IV) analysis that addresses some of the shortcomings of conventional observational studies by using genetic anchors to appraise the causal relevance of exposures in disease (6). It is an increasingly recognized and powerful tool for identifying causes of a broad spectrum of outcomes, including cancer (7, 8). Two-sample MR uses summary-level data from published genome-wide association studies (GWAS) to allow causal appraisal of hypothesized exposure–outcome associations using gene–exposure and gene–outcome associations collected in separate studies (9–11). This method can be extended to appraise causality in a hypothesis-free manner, appraising 1-to-many, many-to-1, or many-to-many exposure–outcome combinations, in an approach known as a MR phenome-wide association study (MR-PheWAS; refs. 12, 13).

Here, we used MR-PheWAS to screen the phenome for potential causes of pancreatic cancer. Our aims were twofold: to identify potentially novel causes of pancreatic cancer that may not have been captured using previous epidemiologic approaches, and to prioritize hypotheses identified in current literature.

Data preparation

Genetic instruments for phenotypes.

Two-sample MR was conducted using the TwoSampleMR R package (14). Genetic data on cognitive, anthropometric, metabolic, immune, and behavioral phenotypes were obtained from the MR-Base database of harmonized GWAS summary data (Supplementary Fig. S1). All phenotypes possessing robust genetic proxies (defined as P < 5e−8) with which to conduct MR analyses were considered for further analysis (N = 523). Duplicate (N = 17) and non-European studies (N = 8) were excluded from the analysis at this stage, leaving 498 potential phenotypes for analysis. Genetic instruments for each phenotype were single-nucleotide polymorphisms (SNP) independently associated with the phenotype of interest after linkage disequilibrium (LD) clumping (window = 10,000 kb; r2 = 0.1). For each identified SNP, the reported effect size was expressed as a one SD increase in the level of the phenotype per risk allele, along with the SE. In the case of a binary phenotype (e.g., presence or absence of coronary heart disease), the reported effect size was expressed as a log-OR. The single largest or most recent summary GWAS data were used per phenotype, systematically prioritized by the instrument extraction function (extract_instruments) of the TwoSampleMR R package and preventing bias from sample overlap from multiple GWAS for exposure phenotypes. For each genetic variant associated with the identified phenotypes, effect-estimates and SEs were extracted from the summary genetic data for pancreatic cancer.

To harmonize the data, effect alleles in the pancreatic cancer summary data were coded to reflect the phenotype-increasing allele, using allele frequencies to resolve strand ambiguities for palindromic SNPs (A/T or C/G). Those phenotypes that did not have genetic variants in the pancreatic cancer GWAS were excluded (N = 12), resulting in a final list of 486 phenotypes on which to perform MR analyses (15–48). These phenotypes are tabulated in Supplementary Table S1, which details the phenotype name, the corresponding author or contributing consortium, the sample size of the contributing GWAS, the number of SNPs in the GWAS, and the original units of each phenotype.

Pancreatic cancer data.

GWAS data from people of European descent with pancreatic cancer and matched controls were obtained from the PanScan (12 studies) and PanC4 (10 studies) consortia through the National Centre for Biotechnology Information (NCBI) Database of Genotypes and Phenotypes (dbGaP; ref. 49; Study Accession: phs000206.v3.p2 and phs000648.v1.p1; project reference #9314). PanScan and PanC4 were initially published in three releases: PanScan I (1,788 cases and 1,769 controls), PanScan II (1,696 cases and 1,563 controls), and PanC4 (3,626 cases and 3,932 controls; refs. 50–52). The samples were originally genotyped using Illumina HumanHap550 (PanScan I), Human610-Quad (PanScan II), and HumanOmniExpressExome-8v1 (PanC4) arrays. A summary of the characteristics of the consortia and contributing studies is provided in Supplementary Table S2A and S2B.

Initial quality control steps and analyses were performed within each publication set at the International Agency for the Research of Cancer (IARC), Lyon. After removing duplicates, related samples, samples with sex discrepancy and population outliers, 7,110 cases and 7,264 controls remained across the three combined consortia. Genotype imputation was performed using the Michigan Imputation Server (53). Genotypes were prephased using SHAPEIT v2 (54) and imputed with Minimach v3 (55) using the Haplotype Reference Consortium panel (56). After imputation, SNPs with an imputation quality (R2) lower than 0.7 were removed from the datasets. Effect-estimates for pancreatic cancer risk were obtained after adjusting for age, sex, and principal components for population stratification using R software (R version 3.3.1). Results from each PanScan release were then combined using a fixed-effects inverse-variance approach implemented in METAL (57). Finally, outcome data were converted from a “chromosome: position” format to reference SNP cluster ID (rsID), using the “biomaRt” R package (58) with human genome build 19 (hg19) as reference, to generate SNP IDs that were in the format expected by the TwoSampleMR R package.

Power calculations

Low power can be a limitation of MR because genetic polymorphisms typically explain a small amount of phenotypic variance. We calculated power for this analysis based on a sample size of 14,374 (7,110 cases, 7,264 controls) across a range of predefined phenotypic variances and effect sizes. The median variance explained by SNP IVs for our 486 phenotypes was 3.3%. At this variance, our power calculations indicated we had 80% power to detect a minimum OR of 1.52 (beta of 0.42), at an alpha of 1.6 × 10−4 (0.05/312 independent tests).

Figure 1.

Volcano plot showing the OR derived from MR analyses of 486 phenotypes against incident pancreatic cancer across the x-axis and a corresponding MR analysis P value (−log10 scale) on the y-axis. Units are standardized, continuous traits are in SD units, whereas binary traits are in log odds units. Small red points denote analyses with an unadjusted P < 0.05. Large red points denote analyses with a Bonferroni-adjusted P < 0.05.

Figure 1.

Volcano plot showing the OR derived from MR analyses of 486 phenotypes against incident pancreatic cancer across the x-axis and a corresponding MR analysis P value (−log10 scale) on the y-axis. Units are standardized, continuous traits are in SD units, whereas binary traits are in log odds units. Small red points denote analyses with an unadjusted P < 0.05. Large red points denote analyses with a Bonferroni-adjusted P < 0.05.

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Mendelian randomization analyses

We used maximum likelihood (59) and multiplicative random effects inverse-variance weighted (MRE IVW; refs. 60, 61) MR analyses when the number of SNPs instrumenting a phenotype was greater than 1. Both have been proposed for MR analyses when using summary genetic data with phenotype instruments containing multiple SNPs (62). An MRE model allows for heterogeneity between the causal estimates targeted by the genetic variants by allowing overdispersion in the regression model. Underdispersion is not permitted (in case of underdispersion, the residual SE is set to 1, as in a fixed-effect analysis). For phenotypes instrumented by a single SNP, we derived Wald ratio effect-estimates (62, 63). Results were expressed ORs with a corresponding 95% confidence interval (CI) per 1 SD increase in continuous traits (e.g., height), and as ORs with 95% CIs per increase in log odds for binary traits (e.g., type II diabetes; ref. 64).

To correct for multiple testing, the correlation structure among the analyzed phenotypes was estimated using PhenoSpD (65), which implements principal component analysis to identify independent variables using GWAS summary–level statistics. Firstly, a correlation matrix of phenotypes was built using metaCCA (66), estimating Pearson pair-wise correlations between the GWAS summary data for each phenotype. Once the correlation matrix was built, the effective number of independent phenotypes was estimated using matrix spectral decomposition (67, 68). PhenoSpD overestimates the number of independent variables as it treats phenotypes from separate studies as entirely independent when it is likely they are not. Therefore, our Bonferroni correction for multiple testing is likely particularly conservative.

Sensitivity analyses

MR-Egger regression (69) was used as a sensitivity analysis to detect bias due to horizontal pleiotropy in the causal estimates. Horizontal pleiotropy is where a genetic variant affects the outcome via a different biological pathway from the phenotype under investigation and is a violation of a key assumption of MR (see Supplementary Fig. S2). MR-Egger regression performs a weighted linear regression of the SNP–disease and SNP–phenotype associations, the intercept of which is not constrained to the origin and can therefore be used to detect and estimate the magnitude of horizontal pleiotropy (69). Deviation from the origin in an MR-Egger regression may suggest the effect of the SNP is operating via a separate pathway. MR-Egger is less efficient when the number of SNPs is low (N < 4); therefore, we omitted this analysis where phenotypes were proxied by 3 or fewer SNPs. In addition, we assessed evidence of heterogeneity between SNPs (another potential indication of horizontal pleiotropy and other violations of MR assumptions) for the causal effect–estimates of the phenotype on pancreatic cancer using forest plots and Cochran Q test. Finally, we investigated whether effect-estimates were different in men and women, and across the different studies within each consortium using the Q test for heterogeneity (70).

Using PhenoSpD, we estimated that the 486 phenotypes we investigated corresponded to 312 independent tests (65). To aid interpretation of our MR analyses, we set a P value threshold of 1.6e−4 (0.05/312) to suggest evidence of association and to prioritize phenotypes for follow-up analyses. Five phenotypes were associated with pancreatic cancer at this threshold (Fig. 1; Table 1). The results of the MR analyses for all phenotypes are shown in Supplementary Table S3. Of the 5 associations, 2 were inversely related to pancreatic cancer: lung adenocarcinoma [OR for pancreatic cancer (95% CI): 0.63 (0.54–0.74) per doubling in the odds of lung adenocarcinoma; P: 1.68e−8] and the metabolite O-sulfo-l-tyrosine [0.58 (0.46–0.74) per SD increase; P: 2.45e−5]. The other 3 phenotypes were positively related to pancreatic cancer [OR (95% CI/SD increase): ADpSGEGDFXAEGGGVR* (a fibrinogen cleavage peptide) 1.60 (1.31–1.95); P: 1.50e−3]; hip circumference [1.42 (1.21–1.67); P: 3.92e−4]; and body mass index [BMI; 1.46 (1.20–1.78); P: 4.02e−6]. Maximum likelihood effect-estimates were consistent with IVW estimates for these associations (Table 1).

Table 1.

MR-PheWAS results passing study multiple testing threshold

Exposure# SNPsML ORML CIPPhetR2FPowerIVW ORIVW CI
Lung adenocarcinoma 0.63 0.54–0.74 1.68e−08 5.47e−08 N/A N/A N/A 0.72 0.48–1.09 
ADpSGEGDFXAEGGGVR* 1.60 1.31–1.95 3.08e−06 1.50e−03 3.59% 71.6 94.0 1.59 0.85–2.97 
O-sulfo-l-tyrosine 0.58 0.46–0.74 8.07e−06 2.45e−04 1.02% 37.9 33.0 0.58 0.24–1.39 
Hip circumference 113 1.42 1.21–1.67 2.41e−05 4.02e−04 4.46% 76.1 48.0 1.34 1.05–1.70 
Body mass index 109 1.46 1.20–1.78 1.25e−04 1.00e−02 2.98% 91.3 51.0 1.44 1.12–1.86 
Exposure# SNPsML ORML CIPPhetR2FPowerIVW ORIVW CI
Lung adenocarcinoma 0.63 0.54–0.74 1.68e−08 5.47e−08 N/A N/A N/A 0.72 0.48–1.09 
ADpSGEGDFXAEGGGVR* 1.60 1.31–1.95 3.08e−06 1.50e−03 3.59% 71.6 94.0 1.59 0.85–2.97 
O-sulfo-l-tyrosine 0.58 0.46–0.74 8.07e−06 2.45e−04 1.02% 37.9 33.0 0.58 0.24–1.39 
Hip circumference 113 1.42 1.21–1.67 2.41e−05 4.02e−04 4.46% 76.1 48.0 1.34 1.05–1.70 
Body mass index 109 1.46 1.20–1.78 1.25e−04 1.00e−02 2.98% 91.3 51.0 1.44 1.12–1.86 

NOTE: Phenotypes passing multiple testing correction for the MR-PheWAS analysis. Maximum likelihood ORs, CIs, and P values are shown for each phenotype in addition to the number of SNPs used in the IV, a Q-test P value for SNP heterogeneity, the variance explained, power statistics, and the inverse-variance weighted OR and CI for each phenotype.

Abbreviations: ML, maximum likelihood; N/A, not available; Phet, P value of heterogeneity from Q test.

There was evidence that the effect of hip circumference on pancreatic cancer varied by pancreatic cancer consortium (Q: 26.52; P: 1.75e−06), but this was not observed for ADpSGEGDFXAEGGGVR* (Q: 1.57; P: 0.46), lung adenocarcinoma (Q: 0.19; P: 0.91), O-sulfo-l-tyrosine (Q: 4.80; P: 0.09), or BMI (Q: 1.56; P: 0.46; Fig. 2). There was also evidence that effects varied by sex for hip circumference (Q: 25.3; P: 4.86e−7), but not ADpSGEGDFXAEGGGVR* (Q: 2.67; P: 0.10), lung adenocarcinoma (Q: 0.43; P: 0.51), O-sulfo-l-tyrosine (Q: 0.13; P: 0.72), or BMI (Q: 0.00; P: 0.95; Fig. 3).

Figure 2.

Forest plot of heterogeneity by PanScan study for phenotypes passing multiple testing correction. Maximum likelihood ORs, CIs, and P values per study are given in addition to I-squared and Q-statistics per phenotype.

Figure 2.

Forest plot of heterogeneity by PanScan study for phenotypes passing multiple testing correction. Maximum likelihood ORs, CIs, and P values per study are given in addition to I-squared and Q-statistics per phenotype.

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Figure 3.

Forest plot of heterogeneity in pancreatic cancer MR-PheWAS by sex for phenotypes passing multiple testing correction. Maximum likelihood ORs, CIs, and P values for each sex are given in addition to I-squared and Q-statistics per phenotype.

Figure 3.

Forest plot of heterogeneity in pancreatic cancer MR-PheWAS by sex for phenotypes passing multiple testing correction. Maximum likelihood ORs, CIs, and P values for each sex are given in addition to I-squared and Q-statistics per phenotype.

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There was clear evidence of heterogeneity in associations with pancreatic cancer among the individual SNPs used as IVs for body mass index (Q: 186.61; P: 0.01), hip circumference (Q: 105.67; P: 4.02e−6), lung adenocarcinoma (Q: 36.64; P: 5.47e−8), ADpSGEGDFXAEGGGVR* (Q: 10.08; P: 1.50e−3), and O-sulfo-l-tyrosine (Q:13.45; P: 2.45e−4; Supplementary Fig. S3A–S3E). The observed heterogeneity is consistent with violations of IV assumptions, such as the presence of horizontal pleiotropy. Intercept tests from MR-Egger regression did not, however, indicate strong evidence for bias from unbalanced pleiotropy for body mass index (OR: 1.00; 95% CI: 0.98–1.02; P: 0.84) and hip circumference (OR: 1.00; 95% CI: 0.98–1.03; P: 0.75). In addition, effect-estimates from MR-Egger regression for hip circumference (OR: 1.18; 95% CI: 0.54–2.50; P: 0.68) and body mass index (OR: 1.35; 95% CI: 0.71–2.51; P: 0.36) were broadly compatible with results based on the maximum likelihood and IVW methods, albeit with wide CIs (see Table 1). While an inverse association was seen for lung adenocarcinoma and pancreatic cancer, the intercept from MR-Egger regression was negative (OR: 0.83; 95% CI: 0.51–1.35; P: 0.52) and the slope was in the opposite direction to the effect observed in the main analysis (OR: 1.57; 95% CI: 0.20–11.17; P: 0.71).

ADpSGEGDFXAEGGGVR* and O-sulfo-l-tyrosine were both instrumented by 2 SNPs; thus, MR-Egger could not be used to assess horizontal pleiotropy for these phenotypes. Associations for both metabolites appeared to be largely driven by rs651007 (a SNP found in the ABO blood group region). The evidence for a causal effect of ADpSGEGDFXAEGGGVR* on pancreatic cancer was weaker for the second SNP (rs601338) used to instrument ADpSGEGDFXAEGGGVR* (OR: 1.04; 95% CI: 0.75–1.44; P:0.81). Similarly, the evidence for a causal effect of O-sulfo-l-tyrosine was weaker for the other SNP (rs6151429) used to instrument O-sulfo-l-tyrosine (OR: 0.84; 95% CI: 0.62–1.14; P:0.26).

For the BMI and hip circumference analyses, 17 SNPs were common IVs for both phenotypes (Supplementary Table S4). We repeated MR analysis of these phenotypes after removing common SNPs between the hip circumference and BMI IVs (71). We obtained OR estimates similar to our original estimates (BMI OR: 1.49, 95% CI: 1.17–1.88; hip circumference OR: 1.41, 95% CI: 1.18–1.69), suggesting these associations were independent of each other.

Of the most established observational phenotypes with pancreatic cancer (smoking, diabetes, chronic pancreatitis, and adiposity; refs. 72, 73), only pancreatitis could not be instrumented and only adiposity passed our P value threshold for further evaluation. The ORs (95% CI) for pancreatic cancer per SD increase in cigarettes smoked per day was 1.27 (0.67–2.42; P: 0.46) and was 1.02 (0.95–1.10; P: 0.56) per doubling in the odds of type II diabetes (Supplementary Table S3).

We undertook an MR-PheWAS of the association of 486 phenotypes with pancreatic cancer, including cognitive, anthropometric, metabolic, immune, and behavioral phenotypes. We provide evidence that 5 of the 486 phenotypes we tested were associated with pancreatic cancer: BMI; hip circumference; ADpSGEGDFXAEGGGVR* (a fibrinogen cleavage peptide); O-sulfo-l-tyrosine; and lung adenocarcinoma.

The association of higher BMI with risk of pancreatic cancer is similar to findings from conventional observational studies, including the IARC Handbook Working Group (73), who reference Genkinger and colleagues (3) as the largest meta-analysis of body fatness on pancreatic cancer (OR for highest BMI category vs. normal: 1.5, 95% CI: 1.2–1.8). Our results also agree with the BMI finding in a MR study using PanScan data by Carreras-Torres and colleagues (OR/SD increase in BMI: 1.3, 95% CI: 1.1–1.7; ref. 74). In addition, they did not change substantially in our sensitivity analyses, thus are compatible with a causal effect.

Hip circumference, while potentially reflecting the observational association of general adiposity with pancreatic cancer, has not been previously implicated as a specific risk factor. Despite evidence of heterogeneity in effect-estimates when we stratified our analyses by PanScan study and sex, the direction of effect of sex- and study-specific estimates for hip circumference were the same. Thus, only the magnitude of the positive effect is uncertain for hip circumference. The SNPs for hip circumference show little evidence of sex-specific effects in the original GWAS (75), but consistent with findings in observational studies (76), the observed heterogeneity in this study suggests the effect of hip circumference on pancreatic cancer is stronger in females than males. Alternatively, the observed heterogeneity could reflect differences in strength of association between the IV SNPs and hip circumference between males and females; a violation of two-sample MR assumptions, casting doubt on the reliability of this result.

To our knowledge, the two metabolites ADpSGEGDFXAEGGGVR* and O-sulfo-l-tyrosine have not previously been associated with pancreatic cancer. There was clear heterogeneity among the SNPs used as instruments for these metabolites, with the associations being largely attributable to a single SNP (rs651007). The other SNPs (rs601338 and rs6151429, instrumenting ADpSGEGDFXAEGGGVR* and O-sulfo-l-tyrosine, respectively) showed weaker evidence of an association with pancreatic cancer. This suggests that the observed association of these metabolites with pancreatic cancer could reflect horizontal pleiotropy, and that the effect of rs651007 on pancreatic cancer may be mediated by some other pathway. A lookup of rs651007 in the National Human Genome Research Institute-European Bioinformatics Institute (NHGRI-EBI) GWAS Catalog revealed it to be mapped to the ABO gene; a locus that has been shown to be significantly associated with risk of pancreatic cancer genetically (16) and observationally (77). The ABO locus is associated with the serum inflammatory markers of TNFα (78) and soluble intercellular adhesion molecule 1 (sICAM-1; ref. 79). Inflammation has been reported to play an important role in the initiation of pancreatic tumors (80); the ABO locus may therefore influence pancreatic cancer risk by affecting systemic inflammation, thus promoting pancreatic carcinogenesis. Alternatively, these metabolites may cause pancreatic cancer, but rs601338 and rs6151429 could be subject to negative pleiotropy or not truly be associated with the metabolites, biasing our results toward the null. The limited availability of SNPs that could be used as instruments for ADpSGEGDFXAEGGGVR* and O-sulfo-l-tyrosine constrained our ability to conduct sensitivity analyses to investigate these further.

Our results suggest evidence of an association between pancreatic cancer and genetic liability to lung adenocarcinoma. A potential explanation for this finding is sample overlap between our exposure and outcome, as we cannot reject the possibility that the PanScan control population contained individuals who were lung adenocarcinoma cases. However, Wolpin and colleagues report using cancer-free controls in their PanScan GWAS manuscript (81); sample overlap would therefore need to be undiagnosed lung cancer cases at the time of study. Given that the 5-year prevalence of lung cancer in the general population of Europe is 4.1% (82), we find it unlikely that there would be enough sample overlap to substantially bias our effect-estimate in this instance. The association between pancreatic cancer and lung adenocarcinoma more likely reflects a shared genetic architecture with pancreatic cancer that is translated in opposing directions to affect risk in these two diseases. In either case, our finding should not be interpreted as a direct causal effect of lung cancer on pancreatic cancer (or vice versa). The association between these SNPs and pancreatic cancer requires validation in larger GWAS and independent replication.

Smoking and type II diabetes, although previously reported risk factors (1, 2, 83, 84), did not show strong evidence of an association with pancreatic cancer in our analysis. While the lack of association shown for smoking in our analysis could indicate that previous observational associations are biased due to confounding or reverse causation, it is also possible that our results reflect low power. The SNPs comprising the instrument for smoking (cigarettes/day) are within the CHRNA3 gene region, which is reported to proxy for smoking heaviness among smokers rather than being representative of cigarettes per day in a general population (85, 86). As such, the outcome GWAS data would have to be restricted to current smokers to produce a meaningful effect-estimate. We could not stratify in this way due to the sole use of summary GWAS statistics; therefore, the effect-estimate generated by our analysis is not conclusive.

Numerous meta-analyses and pooled analyses have been performed looking at the association of diabetes and pancreatic cancer, all showing that long-term diabetes is associated with a ≥50% increased risk of pancreatic cancer (2, 87–92). Our analysis found little evidence to suggest genetic liability to type II diabetes has a causal effect on pancreatic cancer; a finding also reported by Carreras-Torres and colleagues (74).

Strengths

We appraised the association of a multitude of phenotypes with a rare cancer type in a hypothesis-free manner. Our approach features a two-sample MR design, utilizing summary-level data; a particularly valuable method when the outcome of interest is rare, or when the capacity to investigate phenotypes in single studies is limited. For example, given limited power and sample size due to the cost of metabolomic platforms, many metabolites would unlikely have been investigated in relation to pancreatic cancer risk in observational studies. However, because genetic instruments for a multitude of metabolites have been obtained in previous studies with large sample sizes (93, 94), the two-sample MR framework allows the appraisal of the causal effect of the metabolome on health and disease.

Limitations

One limitation of the approach applied here is that not all possible phenotypes have genetic instruments or have not yet been curated in MR-Base. Therefore, some potentially associated phenotypes (e.g., occupational phenotypes and chronic pancreatitis) with pancreatic cancer could not be appraised.

Because of the multiple testing burden of this analysis, there was potential for false negative findings. To remain conservative in such a broad approach, we chose to only present phenotypes that surpassed a strict Bonferroni correction in our main analysis. However, phenotypes showing weaker evidence for association (uncorrected P < 0.05) may contain some true associations and have therefore been included in our Supplementary Materials (P < 0.05; see Supplementary Table S3). On the other hand, the MR approach may identify false positive findings, particularly if there is a horizontal pleiotropic effect of a genetic instrument on the outcome, which was evident for some of the phenotypes identified here.

Given a binary outcome of pancreatic cancer, our MR models (maximum likelihood and IVW) are two-stage estimators where the second stage uses a log-linear regression model to derive an OR parameter. Estimates from such an approach will be overly precise, as uncertainty in the first-stage regression is not accounted for (95). However, this overprecision may be slight if the SE in the first-stage coefficients is low, and can be resolved by using a maximum likelihood method (95). We provide maximum likelihood estimates in addition to IVW estimates in our MR-PheWAS analysis; these estimates are similar across our main findings, indicating that the two-stage estimator with a logistic second-stage model is still a valid test of the null hypothesis here.

By systematically evaluating the association of all available phenotypes with GWAS data in the MR-Base repository of summary genetic data, we may not have had sufficient power to detect a true causal association for every analysis conducted; particularly those proxied by low numbers of SNPs, which may infer a low phenotypic variance explained. Low numbers of SNPs to proxy a phenotype are particularly prevalent when assessing the causal association of metabolites (93, 94) with pancreatic cancer; these phenotypes account for 255 of the 486 phenotypes tested, with a median 2 SNPs per metabolite. However, precise measurement of metabolites via nuclear magnetic resonance (NMR) and liquid chromatography-mass spectronomy (LC/MS) result in relatively large metabolite GWAS per-allele effect sizes and phenotypic variance explained (93, 94). The median variance explained by our metabolite phenotypes was 1.8%; at this variance explained, we had 80% power, with a sample size of 14,374 (7,110 cases, 7,264 controls) to detect an OR of 1.76 (beta of 0.5) at an alpha of at an alpha of 1.6 × 10−4 (0.05/312 independent tests).

Within the context of a highly aggressive cancer for which the underlying causes are poorly understood, we undertook an MR-PheWAS study, which was able to suggest a causal association of a previously identified phenotype for pancreatic cancer in observational epidemiologic literature (BMI), suggest association between an anthropometric phenotype (hip circumference) with pancreatic cancer, and provide insights into some potentially novel mechanisms (metabolic factors and shared genetic architecture with lung cancer) for this disease.

M.R. Munafo reports receiving commercial research grants from Pfizer and Cambridge Cognition, and is a consultant/advisory board member for Cambridge Cognition. No potential conflicts of interest were disclosed by the other authors.

Conception and design: R.J. Langdon, M. Johansson, P. Brennan, M.R. Munafo, C.R. Relton, R.M. Martin, P. Haycock

Development of methodology: R.J. Langdon, K.H. Wade, P. Brennan

Acquisition of data (provided animals, acquired and managed patients, provided facilities, etc.): R.J. Langdon, R. Carreras-Torres, P. Brennan

Analysis and interpretation of data (e.g., statistical analysis, biostatistics, computational analysis): R.J. Langdon, G. Hemani, J. Zheng, M. Johansson, P. Brennan, R.E. Wootton, M.R. Munafo, R.M. Martin, P. Haycock

Writing, review, and/or revision of the manuscript: R.J. Langdon, R.C. Richmond, G. Hemani, J. Zheng, K.H. Wade, R. Carreras-Torres, M. Johansson, R.E. Wootton, M.R. Munafo, G.D. Smith, C.R. Relton, E.E. Vincent, R.M. Martin, P. Haycock

Administrative, technical, or material support (i.e., reporting or organizing data, constructing databases): R.J. Langdon, K.H. Wade

Study supervision: R.C. Richmond, K.H. Wade, P. Brennan, C.R. Relton, R.M. Martin, P. Haycock

This work was supported by a Cancer Research UK program grant (C18281/A19169), a Cancer Research UK Research PhD studentship (C18281/A20988, to R.J. Langdon), Wellcome Trust Investigator awards (202802/Z/16/Z, to K.H. Wade, and 208806/Z/17/Z, to G. Hemani) and a Cancer Research UK Population Research Postdoctoral Fellowship (C52724/A20138, to P. Haycock). The Medical Research Council Integrative Epidemiology Unit at the University of Bristol is supported by the Medical Research Council (MC_UU_12013/1, MC_UU_12013/2, and MC_UU_12013/3; MC_UU_00011/5, to C.R. Relton, and MC_UU_00011/7, to M.R. Munafo) and the University of Bristol.

The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

1.
Wang
Y
,
Duan
H
,
Yang
X
,
Guo
J
. 
Cigarette smoking and the risk of pancreatic cancer: a case-control study
.
Med Oncol
2014
;
31
:
184
.
2.
Huxley
R
,
Ansary-Moghaddam
A
,
Berrington de González
A
,
Barzi
F
,
Woodward
M
. 
Type-II diabetes and pancreatic cancer: a meta-analysis of 36 studies
.
Br J Cancer
2005
;
92
:
2076
83
.
3.
Genkinger
JM
,
Spiegelman
D
,
Anderson
KE
,
Bernstein
L
,
van den Brandt
PA
,
Calle
EE
, et al
A pooled analysis of 14 cohort studies of anthropometric factors and pancreatic cancer risk
.
Int J Cancer
2011
;
129
:
1708
17
.
4.
Raimondi
S
,
Lowenfels
AB
,
Morselli-Labate
AM
,
Maisonneuve
P
,
Pezzilli
R
. 
Pancreatic cancer in chronic pancreatitis; aetiology, incidence, and early detection
.
Best Pract Res Clin Gastroenterol
2010
;
24
:
349
58
.
5.
Franco
A
,
Malhotra
N
,
Simonovits
G
. 
Social science. Publication bias in the social sciences: unlocking the file drawer.
Science
2014
;
345
:
1502
5
.
6.
Davey Smith
G
,
Hemani
G
. 
Mendelian randomization: genetic anchors for causal inference in epidemiological studies
.
Hum Mol Genet
2014
;
23
:
R89
98
.
7.
Pierce
BL
,
Kraft
P
,
Zhang
C
. 
Mendelian randomization studies of cancer risk: a literature review
.
Current Epidemiol Rep
2018
:
1
13
.
8.
Yarmolinsky
J
,
Wade
KH
,
Richmond
RC
,
Langdon
RJ
,
Bull
CJ
,
Tilling
KM
, et al
Causal inference in cancer epidemiology: what is the role of Mendelian randomization?
Cancer Epidemiol Biomarkers Prev
2018
;
27
:
995
1010
.
9.
Theodoratou
E
,
Palmer
T
,
Zgaga
L
,
Farrington
SM
,
McKeigue
P
,
Din
FVN
, et al
Instrumental variable estimation of the causal effect of plasma 25-hydroxy-vitamin D on colorectal cancer risk: a Mendelian randomization analysis
.
PLoS One
2012
;
7
:
e37662
.
10.
Hägg
S
,
Fall
T
,
Ploner
A
,
Mägi
R
,
Fischer
K
,
Draisma
HH
, et al
Adiposity as a cause of cardiovascular disease: a Mendelian randomization study
.
Int J Epidemiol
2015
;
44
:
578
86
.
11.
Pei
Y
,
Xu
Y
,
Niu
W
. 
Causal relevance of circulating adiponectin with cancer: a meta-analysis implementing Mendelian randomization
.
Tumor Biology
2015
;
36
:
585
94
.
12.
Telomeres Mendelian Randomization C
Haycock
PC
,
Burgess
S
,
Nounu
A
,
Zheng
J
,
Okoli
GN
, et al
Association between telomere length and risk of cancer and non-neoplastic diseases: a Mendelian randomization study
.
JAMA Oncol
2017
;
3
:
636
51
.
13.
Millard
LAC
,
Davies
NM
,
Gaunt
TR
,
Davey Smith
G
,
Tilling
K
. 
Software application profile: PHESANT: a tool for performing automated phenome scans in UK Biobank
.
Int J Epidemiol
2017 Oct 5 [Epub ahead of print]
.
14.
Hemani
G
,
Zheng
J
,
Elsworth
B
,
Wade
KH
,
Haberland
V
,
Baird
D
, et al
The MR-Base platform supports systematic causal inference across the human phenome
.
Elife
2018
;
7
. pii: e34408
.
15.
Shin
SY
,
Fauman
EB
,
Petersen
AK
,
Krumsiek
J
,
Santos
R
,
Huang
J
, et al
An atlas of genetic influences on human blood metabolites
.
Nat Genet
2014
;
46
:
543
50
.
16.
Roederer
M
,
Quaye
L
,
Mangino
M
,
Beddall
MH
,
Mahnke
Y
,
Chattopadhyay
P
, et al
The genetic architecture of the human immune system: a bioresource for autoimmunity and disease pathogenesis
.
Cell
2015
;
161
:
387
403
.
17.
Dupuis
J
,
Langenberg
C
,
Prokopenko
I
,
Saxena
R
,
Soranzo
N
,
Jackson
AU
, et al
New genetic loci implicated in fasting glucose homeostasis and their impact on type 2 diabetes risk
.
Nat Genet
2010
;
42
:
105
16
.
18.
Manning
AK
,
Hivert
MF
,
Scott
RA
,
Grimsby
JL
,
Bouatia-Naji
N
,
Chen
H
, et al
A genome-wide approach accounting for body mass index identifies genetic variants influencing fasting glycemic traits and insulin resistance
.
Nat Genet
2012
;
44
:
659
69
.
19.
Scott
RA
,
Lagou
V
,
Welch
RP
,
Wheeler
E
,
Montasser
ME
,
Luan
J
, et al
Large-scale association analyses identify new loci influencing glycemic traits and provide insight into the underlying biological pathways
.
Nat Genet
2012
;
44
:
991
1005
.
20.
Prokopenko
I
,
Poon
W
,
Magi
R
,
Prasad
BR
,
Salehi
SA
,
Almgren
P
, et al
A central role for GRB10 in regulation of islet function in man
.
PLoS Genet
2014
;
10
:
e1004235
.
21.
Kettunen
J
,
Demirkan
A
,
Wurtz
P
,
Draisma
HH
,
Haller
T
,
Rawal
R
, et al
Genome-wide study for circulating metabolites identifies 62 loci and reveals novel systemic effects of LPA
.
Nat Commun
2016
;
7
:
11122
.
22.
Dastani
Z
,
Hivert
MF
,
Timpson
N
,
Perry
JR
,
Yuan
X
,
Scott
RA
, et al
Novel loci for adiponectin levels and their influence on type 2 diabetes and metabolic traits: a multi-ethnic meta-analysis of 45,891 individuals
.
PLoS Genet
2012
;
8
:
e1002607
.
23.
Lambert
JC
,
Ibrahim-Verbaas
CA
,
Harold
D
,
Naj
AC
,
Sims
R
,
Bellenguez
C
, et al
Meta-analysis of 74,046 individuals identifies 11 new susceptibility loci for Alzheimer's disease
.
Nat Genet
2013
;
45
:
1452
8
.
24.
Boraska
V
,
Franklin
CS
,
Floyd
JA
,
Thornton
LM
,
Huckins
LM
,
Southam
L
, et al
A genome-wide association study of anorexia nervosa
.
Mol Psychiatry
2014
;
19
:
1085
94
.
25.
Moffatt
MF
,
Gut
IG
,
Demenais
F
,
Strachan
DP
,
Bouzigon
E
,
Heath
S
, et al
A large-scale, consortium-based genomewide association study of asthma
.
N Engl J Med
2010
;
363
:
1211
21
.
26.
Locke
AE
,
Kahali
B
,
Berndt
SI
,
Justice
AE
,
Pers
TH
,
Day
FR
, et al
Genetic studies of body mass index yield new insights for obesity biology
.
Nature
2015
;
518
:
197
206
.
27.
Shungin
D
,
Winkler
TW
,
Croteau-Chonka
DC
,
Ferreira
T
,
Locke
AE
,
Magi
R
, et al
New genetic loci link adipose and insulin biology to body fat distribution
.
Nature
2015
;
518
:
187
96
.
28.
Randall
JC
,
Winkler
TW
,
Kutalik
Z
,
Berndt
SI
,
Jackson
AU
,
Monda
KL
, et al
Sex-stratified genome-wide association studies including 270,000 individuals show sexual dimorphism in genetic loci for anthropometric traits
.
PLoS Genet
2013
;
9
:
e1003500
.
29.
Estrada
K
,
Styrkarsdottir
U
,
Evangelou
E
,
Hsu
YH
,
Duncan
EL
,
Ntzani
EE
, et al
Genome-wide meta-analysis identifies 56 bone mineral density loci and reveals 14 loci associated with risk of fracture
.
Nat Genet
2012
;
44
:
491
501
.
30.
Zheng
HF
,
Forgetta
V
,
Hsu
YH
,
Estrada
K
,
Rosello-Diez
A
,
Leo
PJ
, et al
Whole-genome sequencing identifies EN1 as a determinant of bone density and fracture
.
Nature
2015
;
526
:
112
7
.
31.
Wade
TD
,
Gordon
S
,
Medland
S
,
Bulik
CM
,
Heath
AC
,
Montgomery
GW
, et al
Genetic variants associated with disordered eating
.
Int J Eat Disord
2013
;
46
:
594
608
.
32.
Cousminer
DL
,
Berry
DJ
,
Timpson
NJ
,
Ang
W
,
Thiering
E
,
Byrne
EM
, et al
Genome-wide association and longitudinal analyses reveal genetic loci linking pubertal height growth, pubertal timing and childhood adiposity
.
Hum Mol Genet
2013
;
22
:
2735
47
.
33.
Tobacco and Genetics Consortium
. 
Genome-wide meta-analyses identify multiple loci associated with smoking behavior
.
Nat Genet
2010
;
42
:
441
7
.
34.
Pattaro
C
,
Teumer
A
,
Gorski
M
,
Chu
AY
,
Li
M
,
Mijatovic
V
, et al
Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney function
.
Nat Commun
2016
;
7
:
10023
.
35.
Rietveld
CA
,
Medland
SE
,
Derringer
J
,
Yang
J
,
Esko
T
,
Martin
NW
, et al
GWAS of 126,559 individuals identifies genetic variants associated with educational attainment
.
Science
2013
;
340
:
1467
71
.
36.
Amin
N
,
Hottenga
JJ
,
Hansell
NK
,
Janssens
AC
,
de Moor
MH
,
Madden
PA
, et al
Refining genome-wide linkage intervals using a meta-analysis of genome-wide association studies identifies loci influencing personality dimensions
.
Eur J Hum Genet
2013
;
21
:
876
82
.
37.
de Moor
MH
,
Costa
PT
,
Terracciano
A
,
Krueger
RF
,
de Geus
EJ
,
Toshiko
T
, et al
Meta-analysis of genome-wide association studies for personality
.
Mol Psychiatry
2012
;
17
:
337
49
.
38.
Consortium
CAD
,
Deloukas
P
,
Kanoni
S
,
Willenborg
C
,
Farrall
M
,
Assimes
TL
, et al
Large-scale association analysis identifies new risk loci for coronary artery disease
.
Nat Genet
2013
;
45
:
25
33
.
39.
Nikpay
M
,
Goel
A
,
Won
HH
,
Hall
LM
,
Willenborg
C
,
Kanoni
S
, et al
A comprehensive 1,000 Genomes-based genome-wide association meta-analysis of coronary artery disease
.
Nat Genet
2015
;
47
:
1121
30
.
40.
Duerr
RH
,
Taylor
KD
,
Brant
SR
,
Rioux
JD
,
Silverberg
MS
,
Daly
MJ
, et al
A genome-wide association study identifies IL23R as an inflammatory bowel disease gene
.
Science
2006
;
314
:
1461
3
.
41.
Liu
JZ
,
van Sommeren
S
,
Huang
H
,
Ng
SC
,
Alberts
R
,
Takahashi
A
, et al
Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations
.
Nat Genet
2015
;
47
:
979
86
.
42.
Paternoster
L
,
Standl
M
,
Waage
J
,
Baurecht
H
,
Hotze
M
,
Strachan
DP
, et al
Multi-ancestry genome-wide association study of 21,000 cases and 95,000 controls identifies new risk loci for atopic dermatitis
.
Nat Genet
2015
;
47
:
1449
56
.
43.
Willer
CJ
,
Schmidt
EM
,
Sengupta
S
,
Peloso
GM
,
Gustafsson
S
,
Kanoni
S
, et al
Discovery and refinement of loci associated with lipid levels
.
Nat Genet
2013
;
45
:
1274
83
.
44.
Wang
Y
,
McKay
JD
,
Rafnar
T
,
Wang
Z
,
Timofeeva
MN
,
Broderick
P
, et al
Rare variants of large effect in BRCA2 and CHEK2 affect risk of lung cancer
.
Nat Genet
2014
;
46
:
736
41
.
45.
International Multiple Sclerosis Genetics Consortium
,
Hafler
DA
,
Compston
A
,
Sawcer
S
,
Lander
ES
,
Daly
MJ
, et al
Risk alleles for multiple sclerosis identified by a genomewide study
.
N Engl J Med
2007
;
357
:
851
62
.
46.
Albagha
OM
,
Wani
SE
,
Visconti
MR
,
Alonso
N
,
Goodman
K
,
Brandi
ML
, et al
Genome-wide association identifies three new susceptibility loci for Paget's disease of bone
.
Nat Genet
2011
;
43
:
685
9
.
47.
Stahl
EA
,
Raychaudhuri
S
,
Remmers
EF
,
Xie
G
,
Eyre
S
,
Thomson
BP
, et al
Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk loci
.
Nat Genet
2010
;
42
:
508
14
.
48.
Huffman
JE
,
Albrecht
E
,
Teumer
A
,
Mangino
M
,
Kapur
K
,
Johnson
T
, et al
Modulation of genetic associations with serum urate levels by body-mass-index in humans
.
PLoS One
2015
;
10
:
e0119752
.
49.
Tryka
KA
,
Hao
L
,
Sturcke
A
,
Jin
Y
,
Wang
ZY
,
Ziyabari
L
, et al
NCBI's Database of Genotypes and Phenotypes: dbGaP
.
Nucleic Acids Res
2014
;
42
:
D975
9
.
50.
Amundadottir
L
,
Kraft
P
,
Stolzenberg-Solomon
RZ
,
Fuchs
CS
,
Petersen
GM
,
Arslan
AA
, et al
Genome-wide association study identifies variants in the ABO locus associated with susceptibility to pancreatic cancer
.
Nat Genet
2009
;
41
:
986
90
.
51.
Petersen
GM
,
Amundadottir
L
,
Fuchs
CS
,
Kraft
P
,
Stolzenberg-Solomon
RZ
,
Jacobs
KB
, et al
A genome-wide association study identifies pancreatic cancer susceptibility loci on chromosomes 13q22.1, 1q32.1 and 5p15.33
.
Nat Genet
2010
;
42
:
224
8
.
52.
Childs
EJ
,
Mocci
E
,
Campa
D
,
Bracci
PM
,
Gallinger
S
,
Goggins
M
, et al
Common variation at 2p13.3, 3q29, 7p13 and 17q25.1 associated with susceptibility to pancreatic cancer
.
Nat Genet
2015
;
47
:
911
6
.
53.
Das
S
,
Forer
L
,
Schönherr
S
,
Sidore
C
,
Locke
AE
,
Kwong
A
, et al
Next-generation genotype imputation service and methods
.
Nat Genet
2016
;
48
:
1284
7
.
54.
Delaneau
O
,
Marchini
J
,
Zagury
JF
. 
A linear complexity phasing method for thousands of genomes
.
Nat Methods
2011
;
9
:
179
81
.
55.
Howie
B
,
Fuchsberger
C
,
Stephens
M
,
Marchini
J
,
Abecasis
GR
. 
Fast and accurate genotype imputation in genome-wide association studies through pre-phasing
.
Nat Genet
2012
;
44
:
955
9
.
56.
McCarthy
S
,
Das
S
,
Kretzschmar
W
,
Delaneau
O
,
Wood
AR
,
Teumer
A
, et al
A reference panel of 64,976 haplotypes for genotype imputation
.
Nat Genet
2016
;
48
:
1279
83
.
57.
Willer
CJ
,
Li
Y
,
Abecasis
GR
. 
METAL: fast and efficient meta-analysis of genomewide association scans
.
Bioinformatics
2010
;
26
:
2190
1
.
58.
Durinck
S
,
Spellman
PT
,
Birney
E
,
Huber
W
. 
Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt
.
Nat Protoc
2009
;
4
:
1184
91
.
59.
Burgess
S
,
Butterworth
A
,
Thompson
SG
. 
Mendelian randomization analysis with multiple genetic variants using summarized data
.
Genet Epidemiol
2013
;
37
:
658
65
.
60.
Burgess
S
,
Bowden
J
. 
Integrating summarized data from multiple genetic variants in Mendelian randomization: bias and coverage properties of inverse-variance weighted methods
.
arXiv
2015
;arXiv:
1512
.
61.
International Consortium for Blood Pressure Genome-Wide Association Study
,
Ehret
GB
,
Munroe
PB
,
Rice
KM
,
Bochud
M
,
Johnson
AD
, et al
Genetic variants in novel pathways influence blood pressure and cardiovascular disease risk
.
Nature
2011
;
478
:
103
9
.
62.
Burgess
S
,
Scott
RA
,
Timpson
NJ
,
Davey Smith
G
,
Thompson
SG
,
Consortium
E-I
. 
Using published data in Mendelian randomization: a blueprint for efficient identification of causal risk factors
.
Eur J Epidemiol
2015
;
30
:
543
52
.
63.
Wald
A
. 
Tests of statistical hypotheses concerning several parameters when the number of observations is large
.
Trans Am Math Soc
1943
;
54
:
426
82
.
64.
Burgess
S
,
Labrecque
JA
. 
Mendelian randomization with a binary exposure variable: interpretation and presentation of causal estimates
.
Eur J Epidemiol
2018
;
33
:
947
52
.
65.
Zheng
J
,
Richardson
TG
,
Millard
LAC
,
Hemani
G
,
Elsworth
BL
,
Raistrick
CA
, et al
PhenoSpD: an integrated toolkit for phenotypic correlation estimation and multiple testing correction using GWAS summary statistics
.
GigaScience
2018
;
7
:
giy090. doi: 10.1093/gigascience/giy090
.
66.
Cichonska
A
,
Rousu
J
,
Marttinen
P
,
Kangas
AJ
,
Soininen
P
,
Lehtimäki
T
, et al
metaCCA: summary statistics-based multivariate meta-analysis of genome-wide association studies using canonical correlation analysis
.
Bioinformatics
2016
;
32
:
1981
9
.
67.
Nyholt
DR
. 
A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium with each other
.
Am J Hum Genet
2004
;
74
:
765
9
.
68.
Li
J
,
Ji
L
. 
Adjusting multiple testing in multilocus analyses using the eigenvalues of a correlation matrix
.
Heredity
2005
;
95
:
221
7
.
69.
Bowden
J
,
Davey Smith
G
,
Burgess
S
. 
Mendelian randomization with invalid instruments: effect estimation and bias detection through Egger regression
.
Int J Epidemiol
2015
;
44
:
512
25
.
70.
Cochran
WG
. 
The combination of estimates from different experiments
.
Biometrics
1954
;
10
:
101
29
.
71.
Haycock
PC
,
Burgess
S
,
Wade
KH
,
Bowden
J
,
Relton
C
,
Davey Smith
G
. 
Best (but oft-forgotten) practices: the design, analysis, and interpretation of Mendelian randomization studies
.
Am J Clin Nutr
2016
;
103
:
965
78
.
72.
Maisonneuve
P
,
Lowenfels
AB
. 
Risk factors for pancreatic cancer: a summary review of meta-analytical studies
.
Int J Epidemiol
2015
;
44
:
186
98
.
73.
Lauby-Secretan
B
,
Scoccianti
C
,
Loomis
D
,
Grosse
Y
,
Bianchini
F
,
Straif
K
, et al
Body fatness and cancer–viewpoint of the IARC working group
.
N Engl J Med
2016
;
375
:
794
8
.
74.
Carreras-Torres
R
,
Johansson
M
,
Gaborieau
V
,
Haycock
PC
,
Wade
KH
,
Relton
CL
, et al
The role of obesity, type 2 diabetes, and metabolic factors in pancreatic cancer: a Mendelian randomization study
.
J Natl Cancer Inst
2017
;
109
. doi: .
75.
Shungin
D
,
Winkler
TW
,
Croteau-Chonka
DC
,
Ferreira
T
,
Locke
AE
,
Magi
R
, et al
New genetic loci link adipose and insulin biology to body fat distribution
.
Nature
2015
;
518
:
187
96
.
76.
Stolzenberg-Solomon
RZ
,
Adams
K
,
Leitzmann
M
,
Schairer
C
,
Michaud
DS
,
Hollenbeck
A
, et al
Adiposity, physical activity, and pancreatic cancer in the National Institutes of Health-AARP Diet and Health Cohort
.
Am J Epidemiol
2008
;
167
:
586
97
.
77.
Wolpin
BM
,
Chan
AT
,
Hartge
P
,
Chanock
SJ
,
Kraft
P
,
Hunter
DJ
, et al
ABO blood group and the risk of pancreatic cancer
.
J Natl Cancer Inst
2009
;
101
:
424
31
.
78.
Melzer
D
,
Perry
JR
,
Hernandez
D
,
Corsi
AM
,
Stevens
K
,
Rafferty
I
, et al
A genome-wide association study identifies protein quantitative trait loci (pQTLs)
.
PLoS Genet
2008
;
4
:
e1000072
.
79.
Pare
G
,
Chasman
DI
,
Kellogg
M
,
Zee
RY
,
Rifai
N
,
Badola
S
, et al
Novel association of ABO histo-blood group antigen with soluble ICAM-1: results of a genome-wide association study of 6,578 women
.
PLoS Genet
2008
;
4
:
e1000118
.
80.
Garcea
G
,
Dennison
AR
,
Steward
WP
,
Berry
DP
. 
Role of inflammation in pancreatic carcinogenesis and the implications for future therapy
.
Pancreatology
2005
;
5
:
514
29
.
81.
Wolpin
BM
,
Rizzato
C
,
Kraft
P
,
Kooperberg
C
,
Petersen
GM
,
Wang
Z
, et al
Genome-wide association study identifies multiple susceptibility loci for pancreatic cancer
.
Nat Genet
2014
;
46
:
994
1000
.
82.
Bray
F
,
Ferlay
J
,
Soerjomataram
I
,
Siegel
RL
,
Torre
LA
,
Jemal
A
. 
Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries
.
CA Cancer J Clin
2018
;
68
:
394
424
.
83.
Fuchs
CS
,
Colditz
GA
,
Stampfer
MJ
,
Giovannucci
EL
,
Hunter
DJ
,
Rimm
EB
, et al
A prospective study of cigarette smoking and the risk of pancreatic cancer
.
Arch Intern Med
1996
;
156
:
2255
60
.
84.
Lu
Y
,
García Rodríguez
LA
,
Malgerud
L
,
González-Pérez
A
,
Martín-Pérez
M
,
Lagergren
J
, et al
New-onset type 2 diabetes, elevated HbA1c, anti-diabetic medications, and risk of pancreatic cancer
.
Br J Cancer
2015
;
113
:
1607
14
.
85.
Taylor
AE
,
Morris
RW
,
Fluharty
ME
,
Bjorngaard
JH
,
Asvold
BO
,
Gabrielsen
ME
, et al
Stratification by smoking status reveals an association of CHRNA5-A3-B4 genotype with body mass index in never smokers
.
PLoS Genet
2014
;
10
:
e1004799
.
86.
Lassi
G
,
Taylor
AE
,
Timpson
NJ
,
Kenny
PJ
,
Mather
RJ
,
Eisen
T
, et al
The CHRNA5-A3-B4 gene cluster and smoking: from discovery to therapeutics
.
Trends Neurosci
2016
;
39
:
851
61
.
87.
Stevens
RJ
,
Roddam
AW
,
Beral
V
. 
Pancreatic cancer in type 1 and young-onset diabetes: systematic review and meta-analysis
.
Br J Cancer
2007
;
96
:
507
9
.
88.
Ben
Q
,
Xu
M
,
Ning
X
,
Liu
J
,
Hong
S
,
Huang
W
, et al
Diabetes mellitus and risk of pancreatic cancer: a meta-analysis of cohort studies
.
Eur J Cancer
2011
;
47
:
1928
37
.
89.
Starup-Linde
J
,
Karlstad
O
,
Eriksen
SA
,
Vestergaard
P
,
Bronsveld
HK
,
de Vries
F
, et al
CARING (CAncer Risk and INsulin analoGues): the association of diabetes mellitus and cancer risk with focus on possible determinants - a systematic review and a meta-analysis
.
Curr Drug Saf
2013
;
8
:
296
332
.
90.
Li
D
,
Tang
H
,
Hassan
MM
,
Holly
EA
,
Bracci
PM
,
Silverman
DT
. 
Diabetes and risk of pancreatic cancer: a pooled analysis of three large case-control studies
.
Cancer Causes Control
2011
;
22
:
189
97
.
91.
Elena
JW
,
Steplowski
E
,
Yu
K
,
Hartge
P
,
Tobias
GS
,
Brotzman
MJ
, et al
Diabetes and risk of pancreatic cancer: a pooled analysis from the pancreatic cancer cohort consortium
.
Cancer Causes Control
2013
;
24
:
13
25
.
92.
Bosetti
C
,
Rosato
V
,
Li
D
,
Silverman
D
,
Petersen
GM
,
Bracci
PM
, et al
Diabetes, antidiabetic medications, and pancreatic cancer risk: an analysis from the International Pancreatic Cancer Case-Control Consortium
.
Ann Oncol
2014
;
25
:
2065
72
.
93.
Shin
SY
,
Fauman
EB
,
Petersen
AK
,
Krumsiek
J
,
Santos
R
,
Huang
J
, et al
An atlas of genetic influences on human blood metabolites
.
Nat Genet
2014
;
46
:
543
50
.
94.
Kettunen
J
,
Tukiainen
T
,
Sarin
AP
,
Ortega-Alonso
A
,
Tikkanen
E
,
Lyytikainen
LP
, et al
Genome-wide association study identifies multiple loci influencing human serum metabolite levels
.
Nat Genet
2012
;
44
:
269
76
.
95.
Burgess
S
,
Small
DS
,
Thompson
SG
. 
A review of instrumental variable estimators for Mendelian randomization
.
Stat Methods Med Res
2015
;
26
:
2333
55
.

Supplementary data