Genetic variation in carcinogen metabolizing enzymes has been proposed as a susceptibility marker for colorectal neoplasia. The cytochrome P450 (CYP) and glutathione S-transferase (GST) enzymes metabolize several classes of carcinogen in the human diet and tobacco smoke. Epidemiologic studies that have sought to investigate the relation between variants in CYP and GST genes and colorectal neoplasia have thus far yielded conflicting results and a consensus regarding their etiologic importance has yet to be reached (1). In light of this, we conducted a case-control study, nested within a large randomized controlled trial, to determine whether functionally characterized variants of the CYP1A1, CYP2E1, GSTM1, GSTT1, and GSTM3 genes are associated with risk of colorectal adenoma. In addition, we investigated the interaction between specific dietary components, smoking, genotype, and colorectal adenoma risk.

Study Sample

The study included 1,899 Caucasian individuals (1,267 males and 632 females), ages 55 to 64 years, who had undergone screening for polyps in the distal colorectum as part of the UK Flexible Sigmoidoscopy Screening Trial (2). The UK Flexible Sigmoidoscopy Screening Trial is a randomized controlled trial of 368,583 participants from 14 geographic regions, designed to test the efficacy of a once-only flexible sigmoidoscopy in the prevention of colorectal cancer. Individuals were invited to participate via their general practitioner. Of the 40,674 screened, 131 colorectal cancers were detected and excluded from the analysis. Other exclusion criteria included a history of colorectal cancer, adenoma, or inflammatory bowel disease; a severe or terminal disease with life expectancy of <5 years; and a sigmoidoscopy or colonoscopy within the past 2 years or incapability of providing informed consent. In the study presented here, cases were individuals with histologically confirmed adenoma of the distal bowel from three of the study centers (Leeds, Norwich, and Portsmouth). All adenoma cases were asked to provide a blood specimen, of which 94% agreed. Controls were age- and sex-matched individuals with a negative flexible sigmoidoscopy result (no adenomatous or hyperplastic polyps). Overall, blood samples were available for 918 cases and 981 controls.

Assessment of Smoking Habit and Diet

Before screening, participants completed a questionnaire regarding how often 26 selected food items were eaten. The dietary items analyzed in this study comprise components known to interact with the cytochrome P450 and GST enzyme systems and included subtypes of cruciferous vegetables, different types of red and processed meat, and usual meat cooking methods. Participants were assigned as never smokers, former smokers, and current smokers.

Genotyping

Polymorphisms were selected on the basis of whether they lead to functional changes in the translated protein, their prevalence in Caucasian populations, and any previous association with colorectal neoplasia (Table 1). The methods used to discriminate the GSTM1, GSTT1, GSTM3, and CYP1A1 alleles have been described elsewhere (3, 4). The CYP2E1*5B allele was distinguished by amplification of a 480-bp fragment that carries two linked variants: a C(−1091)T transition recognized by PstI and a G(−1259)C transversion recognized by RsaI. The CYP2E1*5B allele is determined by a PstI cut, RsaI noncut. Primer sequences were 5′-ACTGGAAAGGAAAGAGAGGAG-3′ (sense) and 5′-CATTCTGTCTTCTAACTGGCA-3′ (antisense).

Table 1.

List of studied genes and polymorphisms

GenePolymorphismVariant phenotype
CYP1A1 3801T-C (rs4646903) In 3′ untranslated region, linked with increased CYP1A1 inducibility. 
 2455A-G (rs1048943) Ile462Val amino acid change, Val enzyme has higher inducibility. 
CYP2E1 −1294C-G (rs3813867) In 5′ untranslated region, predicts higher enzyme levels. 
GSTM1 Null No expression. 
GSTT1 Null No expression. 
GSTM3 AGG/- (intron 6 deletion; rs1799735) Generates recognition site for YY1 transcription factor. 
GenePolymorphismVariant phenotype
CYP1A1 3801T-C (rs4646903) In 3′ untranslated region, linked with increased CYP1A1 inducibility. 
 2455A-G (rs1048943) Ile462Val amino acid change, Val enzyme has higher inducibility. 
CYP2E1 −1294C-G (rs3813867) In 5′ untranslated region, predicts higher enzyme levels. 
GSTM1 Null No expression. 
GSTT1 Null No expression. 
GSTM3 AGG/- (intron 6 deletion; rs1799735) Generates recognition site for YY1 transcription factor. 

Statistical Analysis

Differences in genotype distributions between cases and controls were ascertained by the χ2 statistic. Risks were calculated as odds ratios with 95% confidence intervals by unconditional logistic regression and were adjusted for age, sex, and sigmoidoscopy center. To test for modification of the association between the dietary variables, smoking, and adenoma risk by genotype, a stratified analysis was conducted by genotype. Potential two-way interactions between genotype and the dietary variables were assessed by comparing models with and without the interaction term using the likelihood ratio test. Interactions were considered to be statistically significant at the 1% level.

None of the genotype distributions in the controls differed significantly from those expected under Hardy-Weinberg equilibrium and all were in the range reported previously for Caucasians (ref. 5; Table 2). Carriage of the CYP1A1*2C allele was inversely associated with adenoma risk (odds ratio, 0.7; 95% confidence interval, 0.5-0.9). We did not detect any association with alleles of the other genes and colorectal adenoma risk. Subgroup analyses revealed no effect of gender on genotypic risks. Risk estimates did not differ according to genotype and we found no evidence for multiplicative interaction between diet and smoking, genotype, and adenoma (data not shown). Overall results for diet and smoking from the UK Flexible Sigmoidoscopy Screening Trial study will be published elsewhere.

Table 2.

Genotype frequencies in cases and controls and colorectal adenoma risks

GeneGenotypeCases (N)Controls (N)Odds ratio* (95% confidence interval)
CYP1A1 *1/*1 864 (94.3%) 895 (91.7%) 1.0 
 *1/*2C 52 (5.7%) 80 (8.2%) 0.7 (0.5-0.9) 
 *2C/*2C 0 (0%) 1 (0.1%) — 
 *2C carrier 52 (5.7%) 81 (8.3%) 0.7 (0.5-0.9) 
CYP1A1 *1/*1 745 (84.1%) 738 (83.2%) 1.0 
 *1/*2A 138 (15.6%) 142 (16.0%) 1.0 (0.8-1.2) 
 *2A/*2A 3 (0.3%) 7 (0.8%) 0.4 (0.1-1.7) 
 *2A carrier 141 (15.9%) 149 (16.8%) 0.9 (0.7-1.2) 
CYP2E1 *1/*1 865 (95.0%) 918 (94.5%) 1.0 
 *1/*5B 46 (5.0%) 53 (5.5%) 0.9 (0.6-1.4) 
 *5B/*5B 0 (0%) 0 (0%) — 
GSTM1 Null (0/0) 556 (64.7%) 552 (62.4%) 1.0 
 A/A or A/0 150 (17.5%) 179 (20.2%) 0.8 (0.7-1.1) 
 B/B or B/0 131 (15.3%) 135 (15.3%) 1.0 (0.7-1.3) 
 A/B 22 (2.5%) 19 (2.1%) 1.2 (0.6-2.2) 
GSTM1 Non-null 303 (35.3%) 333 (37.6%) 1.0 
 Null 556 (64.7%) 552 (62.4%) 1.1 (0.9-1.4) 
GSTM3 A/A 649 (70.9%) 692 (70.8%) 1.0 
 A/B 246 (26.9%) 255 (26.1%) 1.0 (0.8-1.3) 
 B/B 21 (2.2%) 30 (3.1%) 0.8 (0.4-1.3) 
 *B carrier 267 (29.1%) 285 (29.2%) 1.0 (0.8-1.2) 
GSTT1 Non-null 644 (83.9%) 672 (82.6%) 1.0 
 Null 124 (16.1%) 142 (17.4%) 0.9 (0.7-1.2) 
GeneGenotypeCases (N)Controls (N)Odds ratio* (95% confidence interval)
CYP1A1 *1/*1 864 (94.3%) 895 (91.7%) 1.0 
 *1/*2C 52 (5.7%) 80 (8.2%) 0.7 (0.5-0.9) 
 *2C/*2C 0 (0%) 1 (0.1%) — 
 *2C carrier 52 (5.7%) 81 (8.3%) 0.7 (0.5-0.9) 
CYP1A1 *1/*1 745 (84.1%) 738 (83.2%) 1.0 
 *1/*2A 138 (15.6%) 142 (16.0%) 1.0 (0.8-1.2) 
 *2A/*2A 3 (0.3%) 7 (0.8%) 0.4 (0.1-1.7) 
 *2A carrier 141 (15.9%) 149 (16.8%) 0.9 (0.7-1.2) 
CYP2E1 *1/*1 865 (95.0%) 918 (94.5%) 1.0 
 *1/*5B 46 (5.0%) 53 (5.5%) 0.9 (0.6-1.4) 
 *5B/*5B 0 (0%) 0 (0%) — 
GSTM1 Null (0/0) 556 (64.7%) 552 (62.4%) 1.0 
 A/A or A/0 150 (17.5%) 179 (20.2%) 0.8 (0.7-1.1) 
 B/B or B/0 131 (15.3%) 135 (15.3%) 1.0 (0.7-1.3) 
 A/B 22 (2.5%) 19 (2.1%) 1.2 (0.6-2.2) 
GSTM1 Non-null 303 (35.3%) 333 (37.6%) 1.0 
 Null 556 (64.7%) 552 (62.4%) 1.1 (0.9-1.4) 
GSTM3 A/A 649 (70.9%) 692 (70.8%) 1.0 
 A/B 246 (26.9%) 255 (26.1%) 1.0 (0.8-1.3) 
 B/B 21 (2.2%) 30 (3.1%) 0.8 (0.4-1.3) 
 *B carrier 267 (29.1%) 285 (29.2%) 1.0 (0.8-1.2) 
GSTT1 Non-null 644 (83.9%) 672 (82.6%) 1.0 
 Null 124 (16.1%) 142 (17.4%) 0.9 (0.7-1.2) 

NOTE: Absolute numbers (N) differ slightly due to differences in efficacy of genotyping protocols.

*

Odds ratios were adjusted for age, sex, and screening center.

Reference category.

Because of the low frequency of CYP1A1*2A and *2C homozygotes, a “carrier” category was created that included CYP1A1*1/*2A and CYP1A1*2A/*2A as a CYP1A1*2A carrier genotype, CYP1A1*1/*2C and CYP1A1*2C*/2C as a CYP1A1*2C carrier genotype, and GSTM3*A*B and GSTM3*B*B as a GSTM3*B carrier genotype.

This is the largest study, to date, to examine the interaction of diet, smoking, and metabolic gene polymorphisms and colorectal adenoma risk. We detected an inverse association between carriage of the CYP1A1*2C allele and risk of colorectal adenoma but no association with the other genotypes. We found no evidence for an interaction between diet, smoking, and genotype in adenoma risk.

The finding that the CYP1A1*2C allele was inversely related to colorectal adenoma was unexpected and conflicts with previous studies where a positive association or no association was identified (6-12). Given the large number of genotypes examined in this study, this finding may have arisen by chance.

One of the strengths of this study is a control group known to be free of distal lesions. However, some degree of misclassification may have occurred as adenomas in the proximal colon cannot be detected during sigmoidoscopy.

Although this is the largest study of colorectal adenoma and CYP/GST polymorphisms to date, statistical power was compromised in several analyses; we had ∼50% power to detect the 30% reduction in risk associated with the CYP1A1*2C-carrier genotype. Larger studies are necessary to confirm the modest reduction in colorectal adenoma risk associated with this allele. However, the low prevalence of the CYP1A1*2C allele raises questions as to the overall impact this variant may have on colorectal neoplasia risk in the Caucasian population.

In conclusion, we report an overall lack of association between common variants of these xenobiotic metabolism genes and colorectal adenoma risk. Given the bipartite mechanism of carcinogen metabolism, studies should be done with adequate statistical power to assess such variants in a combinatorial manner.

The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

We thank Pauline Rogers at Cancer Research UK for assistance with data management and for statistical advice.

1
De Jong MM, Nolte IM, Meerman G, et al. Low-penetrance genes and their involvement in colorectal cancer susceptibility.
Cancer Epidemiol Biomarkers Prev
2002
;
11
:
1332
–52.
2
The UK Flexible Sigmoidoscopy Screening Trial Investigators. Single flexible sigmoidoscopy screening to prevent colorectal cancer: baseline findings of a multicentre randomised trial.
Lancet
2002
;
359
:
1291
–300.
3
Loktionov A, Watson MA, Gunter M, Stebbings WSL, Speakman CTM, Bingham SA. Glutathione S-transferase gene polymorphisms in colorectal cancer patients: interaction between GSTM1 and GSTM3 allele variants as a risk modulating factor.
Carcinogenesis
2001
;
22
:
1053
–60.
4
Katoh T, Inatomi H, Nagaoka A, Sugita A. Cytochrome P4501A1 gene polymorphism and homozygous deletion of the glutathione S-transferase M1 gene in urothelial cancer patients.
Carcinogenesis
1995
;
16
:
655
–7.
5
Garte S, Gaspari L, Alexandrie AK, et al. Metabolic gene polymorphism frequencies in control populations.
Cancer Epidemiol Biomarkers Prev
2001
;
10
:
1239
–48.
6
Inoue H, Kiyohara C, Marugame T, et al. Cigarette smoking, CYP1A1 MspI and GSTM1 genotypes, and colorectal adenomas.
Cancer Res
2000
;
60
:
3749
–52.
7
Sachse C, Smith G, Wilkie MJ, et al. Colorectal Cancer Study Group A pharmacogenetic study to investigate the role of dietary carcinogens in the etiology of colorectal cancer.
Carcinogenesis
2002
;
23
:
1839
–49.
8
Kiss I, Sandor J, Pajkos G, Bogner B, Hegedus G, Ember I. Colorectal cancer risk in relation to genetic polymorphism of cytochrome P450 1A1, 2E1, and glutathione-S-transferase M1 enzymes.
Anticancer Res
2000
;
20
:
519
–22.
9
Sivaraman L, Leatham MP, Yee J, Wilkens LR, Lau AF, Le Marchand L. CYP1A1 genetic polymorphisms and in situ colorectal cancer.
Cancer Res
1994
;
54
:
3692
–5.
10
Ishibe N, Stampfer M, Hunter DJ, Hennekens C, Kelsey KT. A prospective study of cytochrome P450 1A1 polymorphisms and colorectal cancer risk in men.
Cancer Epidemiol Biomarkers Prev
2000
;
9
:
855
–6.
11
Kawajiri K, Nakachi K, Imai K, Watanabe J, Hayashi S. The CYP1A1 gene and cancer susceptibility.
Crit Rev Oncol Hematol
1993
;
14
:
77
–87.
12
Slattery M, Samowitz W, Ma K, et al. CYP1A1, cigarette smoking and colon and rectal cancer.
Am J Epidemiol
2004
;
160
:
842
–52.