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Yuan Ji
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Journal Articles

Abstract 353: The translocations of FGFR2 and NTRK1 in intrahepatic cholangiocarcinoma and their discordance in status by FISH and IHC

Yining Zou, Yuan Ji
Journal: Cancer Research
Cancer Res (2021) 81 (13_Supplement): 353.
https://doi.org/10.1158/1538-7445.AM2021-353
Published: 01 July 2021
View article titled, Abstract 353: The translocations of FGFR2 and NTRK1 in intrahepatic cholangiocarcinoma and their discordance in status by FISH and IHC
Journal Articles

Abstract 486: A phase Ib/II, open-label study evaluating the efficacy and safety of Toripalimab injection (JS001) or combination with Lenvatinib as a neoadjuvant therapy for patients with resectable hepatocellular carcinoma (HCC)

Ying-Hong Shi, Yuan Ji, Wei-Ren Liu, Yan-Rui Pang, Zhen-Bin Ding, Xiu-Tao Fu, Xin Zhang, Cheng Huang, Yun-Fan Sun, Xiao-Dong Zhu, Hui-Chuan Sun, Jian Zhou, Jia Fan
Journal: Cancer Research
Cancer Res (2021) 81 (13_Supplement): 486.
https://doi.org/10.1158/1538-7445.AM2021-486
Published: 01 July 2021
View article titled, Abstract 486: A phase Ib/II, open-label study evaluating the efficacy and safety of Toripalimab injection (JS001) or combination with Lenvatinib as a neoadjuvant therapy for patients with resectable hepatocellular carcinoma (HCC)
Journal Articles

Abstract 739: Whole-exome sequencing of neuroendocrine neoplasm of the liver reveals recurrent mutations in components of RTK-RAS pathways

Lingli Chen, Yuan Ji, Jing Zhao, Lingtong Hao, Yixue Li, Xi Zhang, Huichuan Sun, Rongkui Luo, Jing Han, Jie Huang, Yingyong Hou, Jia Liu
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 739.
https://doi.org/10.1158/1538-7445.AM2019-739
Published: 01 July 2019
View article titled, Abstract 739: Whole-exome sequencing of neuroendocrine neoplasm of the liver reveals recurrent mutations in components of RTK-RAS pathways
Journal Articles

Abstract 742: Genomic alteration, tumor mutation burden and PD-L1 status of Chinese hepatic angiosarcoma patients

Rongkui Luo, Lili Zhang, Zhengzeng Jiang, Lingli Chen, Na Zhu, Yingyong Hou, Qiang Cui, Yueting Qu, Hong Li, Yuan Ji
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 742.
https://doi.org/10.1158/1538-7445.AM2019-742
Published: 01 July 2019
View article titled, Abstract 742: Genomic alteration, tumor mutation burden and PD-L1 status of Chinese hepatic angiosarcoma patients
Journal Articles

Elevation of Stromal-Derived Mediators of Inflammation Promote Prostate Cancer Progression in African-American Men

Marc Gillard, Rodrigo Javier, Yuan Ji, S. Lilly Zheng, Jianfeng Xu, Charles B. Brendler, Susan E. Crawford, Brandon L. Pierce, Donald J. Vander Griend, Omar E. Franco
Journal: Cancer Research
Cancer Res (2018) 78 (21): 6134–6145.
https://doi.org/10.1158/0008-5472.CAN-17-3810
Published: 01 November 2018
View article titled, Elevation of Stromal-Derived Mediators of Inflammation Promote Prostate Cancer Progression in African-American Men
Open the PDF for Elevation of Stromal-Derived Mediators of Inflammation Promote Prostate Cancer Progression in African-American Men in another window
Includes: Supplementary data
Journal Articles

Abstract A018: Distinct genomic alterations in prostate cancer of African American men

Albert Dobi, Gyorgy Petrovics, Hua Li, Denise Young, Shyh-Han Tan, Yongmei Chen, Qingyu Xiao, Yidi Sun, Hong Li, Yixue Li, Yuan Ji, Jun Hou, Wendy Wang, Jacob Kagan, Guo-Ping Zhao, Sudhir Srivastava, Reinhard Ebner, Inger L. Rosner, Jennifer Cullen, Matthew Freedman, Isabell Sesterhenn, Zoltan Szallasi, Shiv Srivastava
Journal: Cancer Research
Cancer Res (2018) 78 (16_Supplement): A018.
https://doi.org/10.1158/1538-7445.PRCA2017-A018
Published: 14 August 2018
View article titled, Abstract A018: Distinct genomic alterations in prostate cancer of African American men
Journal Articles

Abstract 1451: A novel lipid-centrosomal axis in prostate cancer is regulated by PEDF

Francesca Nardi, Philip Fitchev, Omar E. Franco, Jelena Ivanisevic, Adrian Scheibler, Simon W. Hayward, Yuan Ji, Charles B. Brendler, Michael A. Welte, Susan E. Crawford
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 1451.
https://doi.org/10.1158/1538-7445.AM2018-1451
Published: 01 July 2018
View article titled, Abstract 1451: A novel lipid-centrosomal axis in prostate cancer is regulated by PEDF
Journal Articles

Abstract 3000: Pervasive intra-tumour heterogeneity and subclonal selection across cancer types

Stefan Dentro, Ignaty Leshchiner, Kerstin Haase, Jeff Wintersinger, Amit Deshwar, Maxime Tarabichi, Yulia Rubanova, Kaixian Yu, Ignacio Vázquez García, Geoff Macintyre, Kortine Kleinheinz, Dimitri Livitz, Salem Malikic, Nilgun Donmez, Subhajit Sengupta, Yuan Ji, Jonas Demeulemeester, Pavana Anur, Clemency Jolly, Marek Cmero, Daniel Rosebrock, Steve Schumacher, Yu Fan, Matthew Fittall, Xiaotong Yao, Juhee Lee, Matthias Schlesner, Hongtu Zhu, David Adams, Gad Getz, Paul Boutros, Marcin Imielinski, Rameen Beroukhim, Cenk Sahinalp, Martin Peifer, Inigo Martincorena, Florian Markowetz, Ville Mustonen, Ke Yuan, Moritz Gerstung, Wenyi Wang, Paul Spellman, Quaid Morris, David Wedge, Peter Van Loo
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 3000.
https://doi.org/10.1158/1538-7445.AM2018-3000
Published: 01 July 2018
View article titled, Abstract 3000: Pervasive intra-tumour heterogeneity and subclonal selection across cancer types
Journal Articles

Abstract 5352: Racial/ethnic differences in prostate cancer genomic alterations

Albert Dobi, Gyorgy Petrovics, Shyh-Han Tan, Hua Li, Denise Young, Cara Schafer, Jesse Fox, Kevin Babcock, Heng-Cheng Hu, Gauthaman Sukumar, Yingjie Song, Lakshmi Ravindranath, Yongmei Chen, Joseph Cheng, Reinhard Ebner, Qingyu Xiao, Yidi Sun, Yixue Li, Yuan Ji, Jun Hou, Wendy Wang, Guo-Ping Zhao, Jacob Kagan, Sudhir Srivastava, Joel T. Moncur, Clifton L. Dalgard, Matthew Wilkerson, Inger L. Rosner, Jennifer Cullen, Matthew Freedman, Zoltan Szallasi, Isabell A. Sesterhenn, Shiv Srivastava
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 5352.
https://doi.org/10.1158/1538-7445.AM2018-5352
Published: 01 July 2018
View article titled, Abstract 5352: Racial/ethnic differences in prostate cancer genomic alterations
Journal Articles

Abstract 218: The evolutionary history of 2,658 cancers

Clemency Jolly, Moritz Gerstung, Ignaty Leshchiner, Stefan C. Dentro, Santiago Gonzalez, Thomas J. Mitchell, Yulia Rubanova, Pavana Anur, Daniel Rosebrock, Kaixian Yu, Maxime Tarabichi, Amit Deshwar, Jeff Wintersinger, Kortine Kleinheinz, Ignacio Vásquez-García, Kerstin Haase, Subhajit Sengupta, Geoff Macintyre, Salem Malikic, Nilgun Donmez, Dimitri G. Livitz, Mark Cmero, Jonas Demeulemeester, Steve Schumacher, Yu Fan, Xiaotong Yao, Juhee Lee, Matthias Schlesner, Paul C. Boutros, David D. Bowtell, Hongtu Zhu, Gad Getz, Marcin Imielinski, Rameen Beroukhim, S Cenk Sahinalp, Yuan Ji, Martin Peifer, Florian Markowetz, Ville Mustonen, Ke Juan, Wenyi Wang, Quaid D. Morris, Paul T. Spellman, David C. Wedge, Peter Van Loo, PCAWG Evolution and Heterogeneity Working Group
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 218.
https://doi.org/10.1158/1538-7445.AM2018-218
Published: 01 July 2018
View article titled, Abstract 218: The evolutionary history of 2,658 cancers
Journal Articles

Abstract SY10-02: Pan-cancer study of recurrent and heterogeneous RNA aberrations and association with whole-genome variants

Samirkumar Amin, Philip Awadalla, Andrew Biankin, Paul Boutros, Alvis Brazma, Angela Norie Brooks, Claudia Calabrese, David Chang, Aurélien Chateigner, Ken Chen, Zechen Chong, Brian Craft, Chad Creighton, Deniz Demircioğlu, Nuno Fonseca, Milana Frenkel-Morgenstern, Gad Getz, Jonathan Göke, Mary Goldman, Liliana Greger, Syed Haider, Yao He, Katherine Hoadley, Yuan Ji, Andre Kahles, Ekta Khurana, Jan Korbel, Kjong Lehmann, Han Liang, Fenglin Liu, Maximillian Marin, Matthew Meyerson, Akinyemi Ojesina, Francis Ouellette, Chandra Pedamallu, Marc Perry, Gunnar Rätsch, Roland Schwarz, Yuichi Shiraishi, Cameron Soulette, Oliver Stegle, Patrick Tan, Alfonso Valencia, Linda Xiang, Christina Yung, Junjun Zhang, Fan Zhang, Zemin Zhang, Jingchun Zhu
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): SY10-02.
https://doi.org/10.1158/1538-7445.AM2017-SY10-02
Published: 01 July 2017
View article titled, Abstract SY10-02: Pan-cancer study of recurrent and heterogeneous RNA aberrations and association with whole-genome variants
Journal Articles

Abstract 2633: Radiogenomics of breast cancer using DCE-MRI and gene expression profiling

Albert C. Yeh, Stephanie McGregor, Hui Li, Yuan Ji, Yitan Zhu, Tatyana Grushko, Alexandra Edwards, Fan Lui, Jing Zhang, Qiu Niu, Yonglan Zheng, Toshio Yoshimatsu, Galina Khramtsova, Karen Drukker, Gregory Karczmar, Hiroyuki Abe, Jeffrey Mueller, Maryellen Giger, Olufunmilayo Olopade
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 2633.
https://doi.org/10.1158/1538-7445.AM2016-2633
Published: 15 July 2016
View article titled, Abstract 2633: Radiogenomics of breast cancer using DCE-MRI and gene expression profiling
Journal Articles

Abstract 423: Toxicity and efficacy probability intervals design for phase I dose-finding in oncology trials

Daniel H. Li, Jim Whitmore, Yuan Ji
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 423.
https://doi.org/10.1158/1538-7445.AM2016-423
Published: 15 July 2016
View article titled, Abstract 423: Toxicity and efficacy probability intervals design for phase I dose-finding in oncology trials
Journal Articles

Myeloid Expression of Adenosine A2A Receptor Suppresses T and NK Cell Responses in the Solid Tumor Microenvironment

Caglar Cekic, Yuan-Ji Day, Duygu Sag, Joel Linden
Journal: Cancer Research
Cancer Res (2014) 74 (24): 7250–7259.
https://doi.org/10.1158/0008-5472.CAN-13-3583
Published: 14 December 2014
View article titled, Myeloid Expression of Adenosine A<sub>2A</sub> Receptor Suppresses T and NK Cell Responses in the Solid Tumor Microenvironment
Open the PDF for Myeloid Expression of Adenosine A<sub>2A</sub> Receptor Suppresses T and NK Cell Responses in the Solid Tumor Microenvironment in another window
Includes: Supplementary data
Journal Articles

Abstract A12: YAP‐dependent induction of amphiregulin identifies a non‐cell‐autonomous component of the Hippo pathway

Jianmin Zhang, Jun‐Yuan Ji, Min Yu, Michael Overholtzer, Gromoslaw A. Smolen, Joan S. Brugge, Nicholas J. Dyson, Daniel A. Haber
Journal: Cancer Research
Cancer Res (2009) 69 (23_Supplement): A12.
https://doi.org/10.1158/0008-5472.FBCR09-A12
Published: 28 October 2014
View article titled, Abstract A12: YAP‐dependent induction of amphiregulin identifies a non‐cell‐autonomous component of the Hippo pathway
Journal Articles

Tumor-Derived Chemokine CCL5 Enhances TGF-β–Mediated Killing of CD8+ T Cells in Colon Cancer by T-Regulatory Cells

Li-Yuan Chang, Yung-Chang Lin, Jayashri Mahalingam, Ching-Tai Huang, Ten-Wen Chen, Chiao-Wen Kang, Hui-Min Peng, Yu-Yi Chu, Jy-Ming Chiang, Avijit Dutta, Yuan-Ji Day, Tse-Ching Chen, Chau-Ting Yeh, Chun-Yen Lin
Journal: Cancer Research
Cancer Res (2012) 72 (5): 1092–1102.
https://doi.org/10.1158/0008-5472.CAN-11-2493
Published: 01 March 2012
View article titled, Tumor-Derived Chemokine CCL5 Enhances TGF-β–Mediated Killing of CD8<sup>+</sup> T Cells in Colon Cancer by T-Regulatory Cells
Open the PDF for Tumor-Derived Chemokine CCL5 Enhances TGF-β–Mediated Killing of CD8<sup>+</sup> T Cells in Colon Cancer by T-Regulatory Cells in another window
Includes: Supplementary data
Journal Articles

Abstract LB-228: YAP-dependent induction of amphiregulin identifies a non-cell-autonomous component of the Hippo pathway

Jianmin Zhang, Jun-Yuan Ji, Min Yi, Michael Overholtzer, Gromoslaw A. Smolen, Rececca Wang, Joan S. Brugge, Nicholas J. Dyson, Daniel A. Haber
Journal: Cancer Research
Cancer Res (2010) 70 (8_Supplement): LB-228.
https://doi.org/10.1158/1538-7445.AM10-LB-228
Published: 15 April 2010
View article titled, Abstract LB-228: YAP-dependent induction of amphiregulin identifies a non-cell-autonomous component of the Hippo pathway
Journal Articles

Breast Cancer Risk Reduction and Membrane-Bound Catechol O-Methyltransferase Genetic Polymorphisms

Yuan Ji, Janet Olson, Jianping Zhang, Michelle Hildebrandt, Liewei Wang, James Ingle, Zachary Fredericksen, Thomas Sellers, William Miller, J. Michael Dixon, Hiltrud Brauch, Michel Eichelbaum, Christina Justenhoven, Ute Hamann, Yon Ko, Thomas Brüning, Jenny Chang-Claude, Shan Wang-Gohrke, Daniel Schaid, Richard Weinshilboum
Journal: Cancer Research
Cancer Res (2008) 68 (14): 5997–6005.
https://doi.org/10.1158/0008-5472.CAN-08-0043
Published: 15 July 2008
View article titled, Breast Cancer Risk Reduction and Membrane-Bound Catechol <em>O</em>-Methyltransferase Genetic Polymorphisms
Open the PDF for Breast Cancer Risk Reduction and Membrane-Bound Catechol <em>O</em>-Methyltransferase Genetic Polymorphisms in another window
Includes: Supplementary data
Journal Articles

Mammographic breast density and membrane-bound catechol O-methyltransferase (COMT) genetic polymorphisms

Janet Olson, Yuan Ji, Celine Vachon, Christopher Scott, Fergus Couch, Daniel Schaid, James Ingle, Jianping Zhang, Richard Weinshilboum
Journal: Cancer Research
Cancer Res (2008) 68 (9_Supplement): 525.
Published: 01 May 2008
View article titled, Mammographic breast density and membrane-bound catechol O-methyltransferase (COMT) genetic polymorphisms
Journal Articles

Identification of serum protein markers to predict outcome of platin-based chemotherapy in patients with advanced non-small cell lung cancer (NSCLC)

Ralph G. Zinner, Charles Lu, Yuan Ji, Charlotte Clarke, Maki Ando, Ozden Altundag, Spyros Tsavachidis, Roy S. Herbst, Eric T. Fung, Xifeng Wu, Randa Al-Zein, Margaret R. Spitz, Wenhua Lang, Kevin R. Coombes, Li Mao
Journal: Cancer Research
Cancer Res (2005) 65 (9_Supplement): 855.
Published: 01 May 2005
View article titled, Identification of serum protein markers to predict outcome of platin-based chemotherapy in patients with advanced non-small cell lung cancer (NSCLC)