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Journal Articles

Abstract 3320: Discovery and development of DNA methylation biomarkers in human papillomavirus related oropharyngeal squamous cell carcinoma

Shuling Ren, Daria A. Gaykalova, Theresa W. Guo, Alexander V. Favorov, Elana J. Fertig, Zubair Khan, Peter M. DeJong, Mizuo Ando, Chao Liu, Akihiro Sakai, Takahito Fukusumi, Sunny Haft, Sayed Sadat, J Silvio Gutkind, Wayne M. Koch, Joseph A. Califano

Cancer Res (2018) 78 (13_Supplement): 3320.

https://doi.org/10.1158/1538-7445.AM2018-3320

Published: 01 July 2018

View articletitled, Abstract 3320: Discovery and development of DNA methylation biomarkers in human papillomavirus related oropharyngeal squamous cell carcinoma

Journal Articles

Integrated Analysis of Whole-Genome ChIP-Seq and RNA-Seq Data of Primary Head and Neck Tumor Samples Associates HPV Integration Sites with Open Chromatin Marks

Cancer Res (2017) 77 (23): 6538–6550.

https://doi.org/10.1158/0008-5472.CAN-17-0833

Published: 30 November 2017

View articletitled, Integrated Analysis of Whole-Genome ChIP-Seq and RNA-Seq Data of Primary Head and Neck Tumor Samples Associates HPV Integration Sites with Open Chromatin Marks

Includes: Supplementary data

Journal Articles

Abstract 4667: mtDNA sequencing in HNSCC as a measurer of intratumoral heterogeneity and lymph node metastasis

Adrian D. Schubert, Evgeny Izumchenko, William H. Westra, Aditi Chatterjee, Wayne M. Koch, Mohammad O. Hoque, David Sidransky

Cancer Res (2017) 77 (13_Supplement): 4667.

https://doi.org/10.1158/1538-7445.AM2017-4667

Published: 01 July 2017

View articletitled, Abstract 4667: mtDNA sequencing in HNSCC as a measurer of intratumoral heterogeneity and lymph node metastasis

Journal Articles

Abstract 4474: Functional characterization of alternatively spliced GSN in head and neck cancer

Dylan Z. Kelley, Emily L. Flam, Theresa Guo, Craig Bohrson, Michael Considine, Ludmila V. Danilova, Justin A. Bishop, Chi Zhang, Wayne M. Koch, David Sidransky, William Westra, Sarah Wheelan, Liliana Florea, Elana J. Fertig, Joseph A. Califano, Daria A. Gaykalova

Cancer Res (2017) 77 (13_Supplement): 4474.

https://doi.org/10.1158/1538-7445.AM2017-4474

Published: 01 July 2017

View articletitled, Abstract 4474: Functional characterization of alternatively spliced GSN in head and neck cancer

Journal Articles

Abstract 2424: The in-parallel whole-genome ChIP-Seq analysis of primary tissues, patient derived xenografts, and cancer cell lines from HPV-relative HNSCC samples

Dylan Z. Kelley, Emily L. Flam, Hildegard A. Wulf, Theresa Guo, Evgeny Izumchenko, Dzov A. Singman, Ludmila V. Danilova, Elena D. Stavrovskaya, Michael Considine, Justin A. Bishop, William H. Westra, Zubair Khan, Wayne M. Koch, David Sidransky, Sarah Wheelan, Joseph A. Califano, Alexander V. Favorov, Elana J. Fertig, Daria A. Gaykalova

Cancer Res (2017) 77 (13_Supplement): 2424.

https://doi.org/10.1158/1538-7445.AM2017-2424

Published: 01 July 2017

View articletitled, Abstract 2424: The in-parallel whole-genome ChIP-Seq analysis of primary tissues, patient derived xenografts, and cancer cell lines from HPV-relative HNSCC samples

Journal Articles

Abstract 5024: Multiple biomarker combination increased both versatility and recurrence-predictive accuracy of molecular deep surgical margin in head and neck squamous cell carcinoma

Hayashi Masamichi, Wayne M. Koch, Yasuhiro Kodera

Cancer Res (2016) 76 (14_Supplement): 5024.

https://doi.org/10.1158/1538-7445.AM2016-5024

Published: 15 July 2016

View articletitled, Abstract 5024: Multiple biomarker combination increased both versatility and recurrence-predictive accuracy of molecular deep surgical margin in head and neck squamous cell carcinoma

Journal Articles

Abstract 815: DTX1 is an epigenetically regulated tumor suppressor gene discovered by integrative analysis of epigenetic and transcriptional alterations in HNSCC

Daria A. Gaykalova, Veronika Zizkova, Ilse Tiscareno, Yingying Wei, Rajita Vatapalli, Patrick T. Hennessey, Julie Ahn, Ludmila V. Danilova, Zubair Khan, Justin A. Bishop, Wayne M. Koch, William H. Westra, Michael F. Ochs, Joseph A. Califano

Cancer Res (2015) 75 (15_Supplement): 815.

https://doi.org/10.1158/1538-7445.AM2015-815

Published: 01 August 2015

View articletitled, Abstract 815: DTX1 is an epigenetically regulated tumor suppressor gene discovered by integrative analysis of epigenetic and transcriptional alterations in HNSCC

Journal Articles

Abstract 1384: Promoter methylation of tumor suppressor genes in convalescent saliva samples from patients with head and neck squamous cell carcinoma

Semra Demokan, Jatinder Kaur, Alice Y. Chuang, Wojciech K. Mydlarz, Kavita M. Pattani, Wayne M. Koch, David Sidransky, Nejat Dalay, Joseph A. Califano

Cancer Res (2014) 74 (19_Supplement): 1384.

https://doi.org/10.1158/1538-7445.AM2014-1384

Published: 01 October 2014

View articletitled, Abstract 1384: Promoter methylation of tumor suppressor genes in convalescent saliva samples from patients with head and neck squamous cell carcinoma

Journal Articles

Abstract 4527: p53-Reactivating Small Molecules Induce Apoptosis in Head and Neck Cancer

Jong-Lyel Roh, Sung Koo Kang, Myung Sook Kim, Yong Gu Cho, Joseph A. Califano, David Sidransky, Wayne M. Koch

Cancer Res (2010) 70 (8_Supplement): 4527.

https://doi.org/10.1158/1538-7445.AM10-4527

Published: 15 April 2010

View articletitled, Abstract 4527: p53-Reactivating Small Molecules Induce Apoptosis in Head and Neck Cancer

Journal Articles

Expression of human UNC5 in head and neck squamous cell carcinoma

Alice Ya-Chun Chuang, Chunyan Liu, Tony Chih-Yuan Chuang, Wayne M. Koch, William H. Westra, Joseph A. Califano

Cancer Res (2006) 66 (8_Supplement): 1051.

Published: 15 April 2006

View articletitled, Expression of human UNC5 in head and neck squamous cell carcinoma

Journal Articles

Spectrum of mutations of p53 in HNSCC: Results of Intragroup margin study

Luana M. Poeta, Arlene Forastiere, Nicole Benoit, David Goldenberg, Joseph Califano, John A. Ridge, Jarrard W. Goodwin, Daniel Kenady, David Sidransky, Wayne M. Koch

Cancer Res (2005) 65 (9_Supplement): 947.

Published: 01 May 2005

View articletitled, Spectrum of mutations of p53 in HNSCC: Results of Intragroup margin study

Journal Articles

ΔNp63α Up-Regulates the Hsp70 Gene in Human Cancer

Guojun Wu, Motonobu Osada, Zhongmin Guo, Alexey Fomenkov, Shahnaz Begum, Ming Zhao, Sunil Upadhyay, Mingzhao Xing, Feng Wu, Chulso Moon, William H. Westra, Wayne M. Koch, Roberto Mantovani, Joseph A. Califano, Edward Ratovitski, David Sidransky, Barry Trink

Cancer Res (2005) 65 (3): 758–766.

https://doi.org/10.1158/0008-5472.758.65.3

Published: 10 February 2005

View articletitled, ΔNp63α Up-Regulates the Hsp70 Gene in Human Cancer

Includes: Supplementary data

Journal Articles

Identification of a Mononucleotide Repeat as a Major Target for Mitochondrial DNA Alterations in Human Tumors

Montserrat Sanchez-Cespedes, Paola Parrella, Shuji Nomoto, Daniel Cohen, Yan Xiao, Manel Esteller, Carmen Jeronimo, Richard C. K. Jordan, Theresa Nicol, Wayne M. Koch, Mark Schoenberg, Paola Mazzarelli, Vito M. Fazio, David Sidransky

Cancer Res (2001) 61 (19): 7015–7019.

Published: 01 October 2001

View articletitled, Identification of a Mononucleotide Repeat as a Major Target for Mitochondrial DNA Alterations in Human Tumors

Journal Articles

Gene Promoter Hypermethylation in Tumors and Serum of Head and Neck Cancer Patients

Montserrat Sanchez-Cespedes, Manel Esteller, Li Wu, Homaira Nawroz-Danish, George H. Yoo, Wayne M. Koch, Jin Jen, James G. Herman, David Sidransky

Cancer Res (2000) 60 (4): 892–895.

Published: 01 February 2000

View articletitled, Gene Promoter Hypermethylation in Tumors and Serum of Head and Neck Cancer Patients

Journal Articles

Analysis of PTEN/MMAC1 Alterations in Aerodigestive Tract Tumors

Kenji Okami, Li Wu, Greg Riggins, Paul Cairns, Michael Goggins, Ella Evron, Naomi Halachmi, Steven A. Ahrendt, Andre L. Reed, Werner Hilgers, Scott E. Kern, Wayne M. Koch, David Sidransky, Jin Jen

Cancer Res (1998) 58 (3): 509–511.

Published: 01 February 1998

View articletitled, Analysis of PTEN/MMAC1 Alterations in Aerodigestive Tract Tumors

Journal Articles

Detection of Telomerase Activity in Oral Rinses from Head and Neck Squamous Cell Carcinoma Patients

Joseph Califano, Steven A. Ahrendt, Glenn Meininger, William H. Westra, Wayne M. Koch, David Sidransky

Cancer Res (1996) 56 (24): 5720–5722.

Published: 01 December 1996

View articletitled, Detection of Telomerase Activity in Oral Rinses from Head and Neck Squamous Cell Carcinoma Patients

Journal Articles

Allelotype of Salivary Gland Tumors

Michael M. Johns, III, William H. Westra, Joseph A. Califano, David Eisele, Wayne M. Koch, David Sidransky

Cancer Res (1996) 56 (5): 1151–1154.

Published: 01 March 1996

View articletitled, Allelotype of Salivary Gland Tumors

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Abstract 3320: Discovery and development of DNA methylation biomarkers in human papillomavirus related oropharyngeal squamous cell carcinoma

Integrated Analysis of Whole-Genome ChIP-Seq and RNA-Seq Data of Primary Head and Neck Tumor Samples Associates HPV Integration Sites with Open Chromatin Marks

Abstract 4667: mtDNA sequencing in HNSCC as a measurer of intratumoral heterogeneity and lymph node metastasis

Abstract 4474: Functional characterization of alternatively spliced GSN in head and neck cancer

Abstract 2424: The in-parallel whole-genome ChIP-Seq analysis of primary tissues, patient derived xenografts, and cancer cell lines from HPV-relative HNSCC samples

Abstract 5024: Multiple biomarker combination increased both versatility and recurrence-predictive accuracy of molecular deep surgical margin in head and neck squamous cell carcinoma

Abstract 815: DTX1 is an epigenetically regulated tumor suppressor gene discovered by integrative analysis of epigenetic and transcriptional alterations in HNSCC

Abstract 1384: Promoter methylation of tumor suppressor genes in convalescent saliva samples from patients with head and neck squamous cell carcinoma

Abstract 4527: p53-Reactivating Small Molecules Induce Apoptosis in Head and Neck Cancer

Expression of human UNC5 in head and neck squamous cell carcinoma

Spectrum of mutations of p53 in HNSCC: Results of Intragroup margin study

ΔNp63α Up-Regulates the Hsp70 Gene in Human Cancer

Identification of a Mononucleotide Repeat as a Major Target for Mitochondrial DNA Alterations in Human Tumors

Gene Promoter Hypermethylation in Tumors and Serum of Head and Neck Cancer Patients

Analysis of PTEN/MMAC1 Alterations in Aerodigestive Tract Tumors

Detection of Telomerase Activity in Oral Rinses from Head and Neck Squamous Cell Carcinoma Patients

Allelotype of Salivary Gland Tumors

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