1-20 of 39
Wayne Koch
Close
Save search
Follow your search
Access your saved searches in your account
Would you like to receive an alert when new items match your search?
Close Modal
Sort by
Journal Articles

Abstract LB410: Precision oral cancer screening and diagnostic solution using DNA methylation and machine learning to stratify high-risk lesions in saliva from patients of mixed ancestry

Free
Ashley Ramos-Lopez, Amanda Garcia Negron, Guie Beeu Guerrero Hunt, Adhi Guerrero-Thillet, Carolina Zambrano Rabanal, Paola Quiñonez Mendez, Andrea Lopez-Marrero, Alvaro Gutierrez, Fernando Zamuner, Bruce J. Trock, Wayne Koch, Mariana Brait, David Sidransky, Rafael Guerrero-Preston
Journal: Cancer Research
Cancer Res (2025) 85 (8_Supplement_2): LB410.
https://doi.org/10.1158/1538-7445.AM2025-LB410
Published: 25 April 2025
View articletitled, Abstract LB410: Precision oral cancer screening and diagnostic solution using DNA methylation and machine learning to stratify high-risk lesions in saliva from patients of mixed ancestry
Journal Articles

Abstract LB133: Fusobacteria nucleatum and Lactobacteria gasseri-johnsonii associated to PD-1 expression in head and neck cancer patients

Free
Laura Palmieri, Kelvin Navarro, Anne Jedlicka, Amanda Dziedzic, James White, Mariana Brait, Wayne Koch, Filipa Godoy-Vitorino, David Sidransky, Rafael E. Guerrero-Preston
Journal: Cancer Research
Cancer Res (2025) 85 (8_Supplement_2): LB133.
https://doi.org/10.1158/1538-7445.AM2025-LB133
Published: 25 April 2025
View articletitled, Abstract LB133: Fusobacteria nucleatum and Lactobacteria gasseri-johnsonii associated to PD-1 expression in head and neck cancer patients
Journal Articles

Abstract 570: High-resolution microbiome profiling of 16SrRNA sequencing data, Microbiome Arrays, and expression arrays identifies differential bacterial communities in head and neck cancer patients treated with surgery, chemo-radiation, and PD-1 checkpoint blockade therapy

Free
Rafael E. Guerrero-Preston, Kelvin Navarro, Filipa Godoy-Vitorino, James White, Anne Jedlicka, Gustavo Rivera-Alvarez, Barbara Mora-Lagos, Winston Timp, William Westra, Wayne Koch, Luigi Marchionni, Young Kim, David Sidransky
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 570.
https://doi.org/10.1158/1538-7445.AM2018-570
Published: 01 July 2018
View articletitled, Abstract 570: High-resolution microbiome profiling of 16SrRNA sequencing data, Microbiome Arrays, and expression arrays identifies differential bacterial communities in head and neck cancer patients treated with surgery, chemo-radiation, and PD-1 checkpoint blockade therapy
Journal Articles

Abstract 1018: High-resolution microbiome profiling and genome wide arrays uncover bacteria driven alterations of oncogenic and immune pathways in head and neck cancer patients treated with surgery, chemo-radiation and PD-1 checkpoint blockade therapy

Free
Rafael E. Guerrero-Preston, James Robert White, Filipa Godoy-Vitorino, Herminio Gonzalez, Arnold Rodríguez-Hilario, Kelvin Navarro, Gustavo A. Miranda-Carboni, Christina Michailidi, Anne Jedlicka, Stephanie Hao, Sierra Canapp, Jessica Bondy, Amanda Dziedzic, Barbara Mora Lagos, Gustavo Rivera-Alvarez, Winston Timp, William Westra, Wayne Koch, Hyunseok Kang, Luigi Marchionni, Young Kim, David Sidransky
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 1018.
https://doi.org/10.1158/1538-7445.AM2017-1018
Published: 01 July 2017
View articletitled, Abstract 1018: High-resolution microbiome profiling and genome wide arrays uncover bacteria driven alterations of oncogenic and immune pathways in head and neck cancer patients treated with surgery, chemo-radiation and PD-1 checkpoint blockade therapy
Journal Articles

Abstract 1551: GULP1 is an epigenetically altered and functional tumor suppressor in urothelial carcinoma through regulation of Nrf2-Keap1 signaling axis

Free
Masamichi Hayashi, Elisa Guida, Rachel Goldberg, Yoshikuni Inokawa, Leonardo Reis, Akira Oki, Evgeny Izumchenko, Leonel Maldonado, Luigi Marchionni, Mariana Brait, Trinity Bivalacqua, Alexander Baras, George J. Netto, Wayne Koch, David Sidransky, Mohammad O. Hoque
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 1551.
https://doi.org/10.1158/1538-7445.AM2017-1551
Published: 01 July 2017
View articletitled, Abstract 1551: GULP1 is an epigenetically altered and functional tumor suppressor in urothelial carcinoma through regulation of Nrf2-Keap1 signaling axis
Journal Articles

Abstract 4466: GULP1 is a potential tumor suppressor that modulates chemo-resistance through regulation of Nrf2-Keap1 signaling axis in urothelial carcinoma

Free
Elisa Guida, Masamichi Hayashi, Alexander Baras, Leonel Maldonado, Mariana Brait, Leonardo Reis, akira oki, Evgeny Izumchenko, trinity bivalaqua, george J. Netto, Wayne Koch, David Sidransky, mohammad O. Hoque
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 4466.
https://doi.org/10.1158/1538-7445.AM2016-4466
Published: 15 July 2016
View articletitled, Abstract 4466: GULP1 is a potential tumor suppressor that modulates chemo-resistance through regulation of Nrf2-Keap1 signaling axis in urothelial carcinoma
Journal Articles

Abstract 2880: The discovery of novel GSN alternative splicing in head and neck squamous cell carcinoma

Free
Daria A. Gaykalova, Dylan Kelley, Theresa Guo, Craig Bohrson, Ilse Tiscareno, Veronika Zizkova, Michael Considine, Ludmila Danilova, Emily Flam, Justin Bishop, Julie Ahn, Samantha Merritt, Marla Goldsmith, Chi Zhang, Wayne Koch, William Westra, Zubair Khan, Michael Ochs, Sarah Wheelan, Elana Fertig, Joseph Califano
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 2880.
https://doi.org/10.1158/1538-7445.AM2016-2880
Published: 15 July 2016
View articletitled, Abstract 2880: The discovery of novel GSN alternative splicing in head and neck squamous cell carcinoma
Journal Articles

Abstract B1-62: Bumphunting analysis identifies PAX5 promoter methylation and p53 somatic mutations in genomic instability pathways linked to very poor survival in head and neck cancer

Free
Christina Michailidi, Maartje Noordhuis, Tal Hadar, Luigi Marchioni, Elana Fertig, Nishant Agrawal, William Westra, Wayne Koch, Joseph Califano, Victor Velculescu, David Sidransky, Rafael Guerrero-Preston
Journal: Cancer Research
Cancer Res (2015) 75 (22_Supplement_2): B1-62.
https://doi.org/10.1158/1538-7445.COMPSYSBIO-B1-62
Published: 15 November 2015
View articletitled, Abstract B1-62: Bumphunting analysis identifies PAX5 promoter methylation and p53 somatic mutations in genomic instability pathways linked to very poor survival in head and neck cancer
Journal Articles

Abstract 4943: Engulfment gene GULP1 is a functional tumor suppressor through influencing TGF-β pathway and is silenced by promoter methylation in urothelial carcinoma

Free
Masamichi Hayashi, Leonardo O. Reis, Alexander Baras, Leonel Maldonado, Eliza Guida, Evgeny Izumchenko, Mariana Brait, Trinity Bivalacqua, George J. Netto, Wayne Koch, David Sidransky, Mohammad O. Hoque
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 4943.
https://doi.org/10.1158/1538-7445.AM2015-4943
Published: 01 August 2015
View articletitled, Abstract 4943: Engulfment gene GULP1 is a functional tumor suppressor through influencing TGF-β pathway and is silenced by promoter methylation in urothelial carcinoma
Journal Articles

Abstract 1533: 16S rRNA saliva analysis unveils differences in the head and neck squamous cell carcinoma microbiome before and after surgical resection

Free
Rafael E. Guerrero-Preston, Filipa Godoy-Vitorino, Herminio González, Christina Michailidi, Anne Jedlicka, Amanda Dziedzic, Rajagowthamee Thangavel, Tal Hadar, Maartje G. Noordhuis, William Westra, Wayne Koch, David Sidransky
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 1533.
https://doi.org/10.1158/1538-7445.AM2015-1533
Published: 01 August 2015
View articletitled, Abstract 1533: 16S rRNA saliva analysis unveils differences in the head and neck squamous cell carcinoma microbiome before and after surgical resection
Journal Articles

Abstract 3409: Transcription factor signature of head and neck squamous cell carcinoma

Free
Daria A. Gaykalova, Judi Manola, Hiroyuki Ozawa, Kathryn Morton, Justin Bishop, Michael Considine, Rajni Sharma, Chi Zhang, Elana Fertig, Marietta Tan, Patrick Hennessey, Julie Ahn, Wayne Koch, Zubair Khan, Christine H. Chung, Michael F. Ochs, Joseph A. Califano
Journal: Cancer Research
Cancer Res (2014) 74 (19_Supplement): 3409.
https://doi.org/10.1158/1538-7445.AM2014-3409
Published: 01 October 2014
View articletitled, Abstract 3409: Transcription factor signature of head and neck squamous cell carcinoma
Journal Articles

Abstract 870: 16S rRNA saliva analysis unveils microbiome biomonitors linked to human papilloma virus and oropharyngeal squamous cell carcinoma

Free
Rafael E. Guerrero-Preston, Christina Michailidi, Anne Jedlicka, Rajagowthamee Thangavel, Tal Hadar, Maartje G. Nordhuis, William Westra, Wayne Koch, Joseph Califano, David Sidransky
Journal: Cancer Research
Cancer Res (2014) 74 (19_Supplement): 870.
https://doi.org/10.1158/1538-7445.AM2014-870
Published: 01 October 2014
View articletitled, Abstract 870: 16S rRNA saliva analysis unveils microbiome biomonitors linked to human papilloma virus and oropharyngeal squamous cell carcinoma
Journal Articles

Abstract 1363: Epigenetic inactivation of VGF in urothelial cell carcinoma and its potential as a non-invasive biomarker using urine

Free
Masamichi Hayashi, Heike Bernert, Luciane Tsukamoto Kagohara, Mariana Brait, Mark Schoenberg, Trinity Bivalacqua, George Netto, Wayne Koch, David Sidransky, Mohammad O. Hoque
Journal: Cancer Research
Cancer Res (2014) 74 (19_Supplement): 1363.
https://doi.org/10.1158/1538-7445.AM2014-1363
Published: 01 October 2014
View articletitled, Abstract 1363: Epigenetic inactivation of VGF in urothelial cell carcinoma and its potential as a non-invasive biomarker using urine
Journal Articles

Abstract 558: Mutational heterogeneity related to neoadjuvant therapy response in muscle invasive urothelial cell carcinoma revealed by whole-exome sequencing

Free
Masamichi Hayashi, Enrico Munari, Christina Michailidi, Mariana Brait, Mark Schoenberg, Trinity Bivalacqua, George Netto, Wayne Koch, David Sidransky, Mohammad O. Hoque
Journal: Cancer Research
Cancer Res (2014) 74 (19_Supplement): 558.
https://doi.org/10.1158/1538-7445.AM2014-558
Published: 01 October 2014
View articletitled, Abstract 558: Mutational heterogeneity related to neoadjuvant therapy response in muscle invasive urothelial cell carcinoma revealed by whole-exome sequencing
Journal Articles

Abstract 2482: Key tumor suppressor genes inactivated by promoter methylation and somatic mutations in head and neck cancer

Free
Rafael Guerrero-Preston, Christina Michailidi, Luigi Marchionni, Curtis Pickering, Mitchell Frederick, Jeffrey Myers, Srinivasan Yegnasubramanian, Tal Hadar, Maartje Noordhuis, Elana Fertig, Nishant Agrawal, William Westra, Wayne Koch, Joseph Califano, Victor Velculescu, David Sidransky
Journal: Cancer Research
Cancer Res (2014) 74 (19_Supplement): 2482.
https://doi.org/10.1158/1538-7445.AM2014-2482
Published: 01 October 2014
View articletitled, Abstract 2482: Key tumor suppressor genes inactivated by promoter methylation and somatic mutations in head and neck cancer
Journal Articles

Abstract 3837: Innovative rapid gene methylation analysis of surgical margin tissues in head and neck cancer

Free
Masamichi Hayashi, Rafael Guerrero-Preston, Zubair Kahn, Xiufeng Li, Julie Ahn, Marla Goldsmith, Christina Michailidi, Wayne Koch
Journal: Cancer Research
Cancer Res (2014) 74 (19_Supplement): 3837.
https://doi.org/10.1158/1538-7445.AM2014-3837
Published: 01 October 2014
View articletitled, Abstract 3837: Innovative rapid gene methylation analysis of surgical margin tissues in head and neck cancer
Journal Articles

Abstract 641: Correlation of methylation status of deep surgical margins with the local reccurence of head and neck squamous cell carcinoma.

Free
Masamichi Hayashi, Gaosong Wu, Xiaofei Chang, Xiufeng Li, Julie Ahn, Zubair Khan, Belinda Akpeng, Jong–Lyel Roh, Wayne Koch
Journal: Cancer Research
Cancer Res (2013) 73 (8_Supplement): 641.
https://doi.org/10.1158/1538-7445.AM2013-641
Published: 15 April 2013
View articletitled, Abstract 641: Correlation of methylation status of deep surgical margins with the local reccurence of head and neck squamous cell carcinoma.
Journal Articles

Abstract 666: Validation of nucleolar protein 4 as a novel methylated tumor suppressor gene in head and neck cancer.

Free
Semra Demokan, Alice Y. Chuang, Kavita M. Pattani, David Sidransky, Wayne Koch, Joseph A. Califano
Journal: Cancer Research
Cancer Res (2013) 73 (8_Supplement): 666.
https://doi.org/10.1158/1538-7445.AM2013-666
Published: 15 April 2013
View articletitled, Abstract 666: Validation of nucleolar protein 4 as a novel methylated tumor suppressor gene in head and neck cancer.
Journal Articles

Abstract 1892: Identification of differentially methylated genes associated with cetuximab and erlotinib resistance

Free
Takenori Ogawa, Xiaofei Chang, Wayne Koch, David Sidransky
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 1892.
https://doi.org/10.1158/1538-7445.AM2012-1892
Published: 15 April 2012
View articletitled, Abstract 1892: Identification of differentially methylated genes associated with cetuximab and erlotinib resistance
Journal Articles

Abstract 4041: Identification of GNG7 as an epigenetically silenced gene in head and neck cancer by gene expression profiling

Free
Semra Demokan, Alice Y. Chuang, Xiaofei Chang, Tanbir Khan, Ian M. Smith, Kavita M. Pattani, Santanu Dasgupta, Shahnaz Begum, Zubair Khan, Nanette J. Liegeois, William H. Westra, David Sidransky, Wayne Koch, Joseph A. Califano
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 4041.
https://doi.org/10.1158/1538-7445.AM2012-4041
Published: 15 April 2012
View articletitled, Abstract 4041: Identification of GNG7 as an epigenetically silenced gene in head and neck cancer by gene expression profiling