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Trevor Pugh
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Journal Articles

Abstract 538: Cell-free whole genome sequencing for the detection of cancer in patients with germline BRCA1/2 mutations

Derek Wong, Adriana Aguilar-Mahecha, Josiane Lafleur, Clarissa Chan, Kirsten Farncombe, Maia Norman, Leslie Oldfield, Prabhjit Basra, Stephanie Pederson, Johanna Wellum, Stephenie Prokopec, Mark Basik, Raymond H. Kim, Trevor Pugh
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 538.
DOI: https://doi.org/10.1158/1538-7445.AM2022-538
Published: 15 June 2022
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Journal Articles

Abstract 563: cfDNA-based analysis of minimal residual disease and T-cell receptor clonality as predictors of relapse in stage 3 NSCLC treated with chemoradiotherapy and durvalumab

Sally CM Lau, Shirin Soleimani, Jinfeng Zou, Justin Burgener, Shelley Kuang, Stephanie WY Wong, Malcolm Ryan, Ben X. Wang, Stephanie Pedersen, Devalben Patel, Penelope A. Bradbury, Geoffrey Liu, Natasha Leighl, Ming S. Tsao, Pamela S. Ohashi, Scott V. Bratman, Trevor Pugh, Frances A. Shepherd, Adrian G. Sacher
Journal: Cancer Research
Cancer Res (2021) 81 (13_Supplement): 563.
DOI: https://doi.org/10.1158/1538-7445.AM2021-563
Published: 01 July 2021
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Journal Articles

Abstract 5724: Revelation of shared transcriptional gradients in glioblastoma tumors and cultured glioma stem cells

Owen K. Whitley, Laura M. Richards, Florence Cavalli, Paul Guilhamon, Fiona Coutinho, Michelle Kushida, H. Artee Luchman, Samuel Weiss, Mathieu Lupien, Peter Dirks, Trevor Pugh, Gary Bader
Journal: Cancer Research
Cancer Res (2020) 80 (16_Supplement): 5724.
DOI: https://doi.org/10.1158/1538-7445.AM2020-5724
Published: 15 August 2020
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Journal Articles

Abstract IA02: Novel strategies for early cancer detection and prevention: The Li-Fraumeni syndrome story

David Malkin, Nicholas Light, Valli Subrasi, Benjamin Brew, Sangeetha Paramathas, Arash Nabbi, Sergei Prykhozhij, Trevor Pugh, Jason Berman, Anna Goldenberg, Adam Shlien
Journal: Cancer Research
Cancer Res (2020) 80 (14_Supplement): IA02.
DOI: https://doi.org/10.1158/1538-7445.PEDCA19-IA02
Published: 15 July 2020
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Journal Articles

Abstract CT190: A Phase II basket study of hypomethylating agent oral cc-486 and durvalumab in advanced solid tumors (METADUR)

Kirsty Taylor, Helen Loo Yau, Ben X. Wang, Philippe L. Bedard, Albiruni R. Razak, Aaron R. Hansen, Anna Spreafico, Dave Cescon, Marcus O. Butler, Amit M. Oza, Stephanie Lheureux, Neda Stjepanovic, Lisa Wang, Brendan Van As, Sarah Boross-Harmer, Trevor Pugh, Lillian L. Siu, Daniel D. De Carvalho
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): CT190.
DOI: https://doi.org/10.1158/1538-7445.AM2019-CT190
Published: 01 July 2019
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Journal Articles

Abstract 2607: The cBioPortal for Cancer Genomics: an open source platform for accessing and interpreting complex cancer genomics data in the era of precision medicine

Jianjiong Gao, Ersin Ciftci, Pichai Raman, Pieter Lukasse, Istemi Bahceci, Adam Abeshouse, Hsiao-Wei Chen, Ino de Bruijn, Benjamin Gross, Zachary Heins, Ritika Kundra, Aaron Lisman, Angelica Ochoa, Robert Sheridan, Onur Sumer, Yichao Sun, Jiaojiao Wang, Manda Wilson, Hongxin Zhang, James Xu, Andy Dufilie, Priti Kumari, James Lindsay, Anthony Cros, Karthik Kalletla, Fedde Schaeffer, Sander Tan, Sjoerd van Hagen, Jorge Reis-Filho, Kees van Bochove, Ugur Dogrusoz, Trevor Pugh, Adam Resnick, Chris Sander, Ethan Cerami, Nikolaus Schultz
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 2607.
DOI: https://doi.org/10.1158/1538-7445.AM2017-2607
Published: 01 July 2017
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Journal Articles

Abstract 2410: Toward mutation analysis of regulatory elements: Epigenetic profiling of primary breast tumors

Samah El Ghamrasni, Paul Guilhamon, Rene Quevedo, Cindy Yang, Mathieu Lupien, Trevor Pugh
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 2410.
DOI: https://doi.org/10.1158/1538-7445.AM2017-2410
Published: 01 July 2017
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Journal Articles

Abstract 846: Improving T-cell receptor clonotyping of T-cell lymphomas using hybrid-Capture and next-generation sequencing

Etienne Mahe, David Mulder, Mark Dowar, Mahadeo Sukhai, Linh Nguyen, Pamela Ohashi, Jan Delabie, Tracy L. Stockley, Trevor Pugh, Suzanne Kamel-Reid
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 846.
DOI: https://doi.org/10.1158/1538-7445.AM2016-846
Published: 15 July 2016
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Journal Articles

Abstract 5277: The cBioPortal for cancer genomics and its application in precision oncology

Jianjiong Gao, James Lindsay, Stuart Watt, Istemi Bahceci, Pieter Lukasse, Adam Abeshouse, Hsiao-Wei Chen, Ino de Bruijn, Benjamin Gross, Dong Li, Ritika Kundra, Zachary Heins, Jorge Reis-Filho, Onur Sumer, Yichao Sun, Jiaojiao Wang, Qingguo Wang, Hongxin Zhang, Priti Kumari, M. Furkan Sahin, Sander de Ridder, Fedde Schaeffer, Kees van Bochove, Ugur Dogrusoz, Trevor Pugh, Chris Sander, Ethan Cerami, Nikolaus Schultz
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 5277.
DOI: https://doi.org/10.1158/1538-7445.AM2016-5277
Published: 15 July 2016
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Journal Articles

Abstract 628: Determinants of quality of next-generation sequencing output from the strand-specific TruSight Tumor Sequencing Panel in a clinical diagnostic setting

Swati Garg, Mahadeo A. Sukhai, Mariam Thomas, Michelle Mah, Tong Zhang, Trevor Pugh, Suzanne Kamel-Reid, Tracey L. Stockley
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 628.
DOI: https://doi.org/10.1158/1538-7445.AM2015-628
Published: 01 August 2015
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Journal Articles

Abstract 4260: Clinical testing and implementation of the TruSight Myeloid Next Generation Sequencing (NGS) panel for identification of clinically relevant variants in hematological malignancies

Mariam Thomas, Mahadeo Sukhai, Tong Zhang, Djamel Harbi, Justin De Souza, Katherine MacDonald, Trevor Pugh, Mark Minden, Andre Schuh, Tracy L. Stockley, Suzanne Kamel-Reid
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 4260.
DOI: https://doi.org/10.1158/1538-7445.AM2015-4260
Published: 01 August 2015
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Journal Articles

Abstract 3708: Filling the void of Canadian T-cell lymphoma epidemiology: Data from the canadian institute for health information discharge abstract database

Etienne R. Mahe, Princess Margaret Cancer Centre Advanced Molecular Diagnostics Laboratory, Trevor Pugh, Tracy Stockley, Suzanne Kamel-Reid
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 3708.
DOI: https://doi.org/10.1158/1538-7445.AM2015-3708
Published: 01 August 2015
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Journal Articles

Abstract A12: Systematic identification of germline mutations in rhabdomyosarcoma and neuroblastoma using massively paralleled sequencing

Jun S. Wei, Rajesh Patidar, John Shern, Shile Zhang, Trevor Pugh, Sharon J. Diskin, Sivasish Sindiri, Young K. Song, Hongling Liao, Xinyu Wen, Jianjun Wang, Stephen X. Skapek, James R. Anderson, Frederic G. Barr, Robert C. Seeger, John M. Maris, Douglas Hawkins, Javed Khan
Journal: Cancer Research
Cancer Res (2014) 74 (20_Supplement): A12.
DOI: https://doi.org/10.1158/1538-7445.PEDCAN-A12
Published: 09 October 2014
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Journal Articles

Abstract 5081: Systematic identification of germline mutations in rhabdomyosarcoma and neuroblastoma using massively paralleled sequencing

Jun S. Wei, Rajesh Patidar, John Shern, Shile Zhang, Trevor Pugh, Sharon J. Diskin, Sivasish Sindiri, Young K. Song, Hongling Liao, Xinyu Wen, Jianjun Wang, Stephen X. Skapek, James R. Anderson, Frederic G. Barr, Robert C. Seeger, John M. Maris, Douglas S. Hawkins, Javed Khan
Journal: Cancer Research
Cancer Res (2014) 74 (19_Supplement): 5081.
DOI: https://doi.org/10.1158/1538-7445.AM2014-5081
Published: 01 October 2014
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Abstract 5056: A glimpse into the somatic mutation landscape of melanoma through exome sequencing of 121 tumor-normal pairs

Eran Hodis, Ian Watson, Jean-Philippe Theurillat, Lihua Zou, Chelsea Place, Elizabeth Nickerson, Daniel Auclair, Kristian Cibulskis, Andrey Sivachenko, Gregory Kryukov, Nicolas Stransky, Alex H. Ramos, Douglas Voet, Michael S. Lawrence, Petar Stojanov, Gordon Saksena, Aaron McKenna, Scott L. Carter, Trevor Pugh, Michael Noble, Pei Lin, Lee Lichtenstein, Robert Zupko, Carrie Sougnez, Candace Guiducci, Robert C. Onofrio, Lauren Ambrogio, Timothy Fennell, Kelly Chong, Wendy Winckler, Kristin Ardlie, Eric S. Lander, Todd Golub, Matthew Meyerson, Stacey B. Gabriel, Gad Getz, Stefan Wagner, Dirk Schadendorf, Dave S. B. Hoon, Lynda Chin, Levi A. Garraway
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 5056.
DOI: https://doi.org/10.1158/1538-7445.AM2012-5056
Published: 15 April 2012
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Journal Articles

Abstract 3960: Rapid and efficient large-scale somatic mutation validation approaches for cancer genome sequencing

Kristian Cibulskis, Andrey Sivachenko, Peter Hammerman, Ivan Imaz, Trevor Pugh, Carrie Sougnez, Wendy Winckler, Stacey Gabriel, Gaddy Getz
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 3960.
DOI: https://doi.org/10.1158/1538-7445.AM2012-3960
Published: 15 April 2012
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The Y-box binding protein-1 (YB-1)/epidermal growth factor receptor (EGFR) pathway are frequently expressed in basal-like breast cancer and provides opportunities for targeted therapies

Anna Stratford, Golareh Habibi, Jennifer Law, Helen Jiang, Ashleen Shadeo, Tim Buys, Maggie Cheang, Wan Lam, Trevor Pugh, Marco Marra, C.Blake Gilks, Torsten Nielsen, Sandra Dunn
Journal: Cancer Research
Cancer Res (2007) 67 (9_Supplement): 2558.
Published: 01 May 2007
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