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Torben F. Orntoft
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Journal Articles

Abstract 3804: Comprehensive comparison of bisulfite conversion kits: A guide for optimal sensitivity and specificity of circulating cell-free DNA methylation-based biomarkers

Sarah Ø. Jensen, Mai-Britt W. Ørntoft, Jesper B. Bramsen, Torben F. Ørntoft, Claus L. Andersen
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 3804.
https://doi.org/10.1158/1538-7445.AM2017-3804
Published: 01 July 2017
View article titled, Abstract 3804: Comprehensive comparison of bisulfite conversion kits: A guide for optimal sensitivity and specificity of circulating cell-free DNA methylation-based biomarkers
Journal Articles

Abstract 3948: Comprehensive characterization of genomic and transcriptomic heterogeneity in advanced bladder cancer by multiregional analysis

Mathilde B. Thomsen, Philippe Lamy, Iver Nordentoft, Søren Vang, Line Reinert, Søren Høyer, Torben F. Ørntoft, Jørgen B. Jensen, Lars Dyrskjøt
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 3948.
https://doi.org/10.1158/1538-7445.AM2017-3948
Published: 01 July 2017
View article titled, Abstract 3948: Comprehensive characterization of genomic and transcriptomic heterogeneity in advanced bladder cancer by multiregional analysis
Journal Articles

Abstract 5450: Urinary microRNA as diagnostic and prognostic biomarkers for prostate cancer

Jacob Fredsøe, Anni K. Rasmussen, Anni R. Thomsen, Peter Mouritzen, Søren Høyer, Michael Borre, Torben F. Ørntoft, Karina D. Sørensen
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 5450.
https://doi.org/10.1158/1538-7445.AM2017-5450
Published: 01 July 2017
View article titled, Abstract 5450: Urinary microRNA as diagnostic and prognostic biomarkers for prostate cancer
Journal Articles

Paired Exome Analysis Reveals Clonal Evolution and Potential Therapeutic Targets in Urothelial Carcinoma

Philippe Lamy, Iver Nordentoft, Karin Birkenkamp-Demtröder, Mathilde Borg Houlberg Thomsen, Palle Villesen, Søren Vang, Jakob Hedegaard, Michael Borre, Jørgen Bjerggaard Jensen, Søren Høyer, Jakob Skou Pedersen, Torben F. Ørntoft, Lars Dyrskjøt
Journal: Cancer Research
Cancer Res (2016) 76 (19): 5894–5906.
https://doi.org/10.1158/0008-5472.CAN-16-0436
Published: 02 October 2016
View article titled, Paired Exome Analysis Reveals Clonal Evolution and Potential Therapeutic Targets in Urothelial Carcinoma
Open the PDF for Paired Exome Analysis Reveals Clonal Evolution and Potential Therapeutic Targets in Urothelial Carcinoma in another window
Includes: Supplementary data
Journal Articles

Abstract 2927: miR-625-3p regulates oxaliplatin resistance by targeting MAP2K6-p38 signalling in human colorectal adenocarcinoma cell

Mads H. Rasmussen, Iben Lyskjær, Rosa R. Jersie-Christensen, Line S. Tarpgaard, Bjarke Primdal-Bengtson, Morten M. Nielsen, Jakob S. Pedersen, Tine P. Hansen, Flemming Hansen, Jesper V. Olsen, Per Pfeiffer, Torben F. Ørntoft, Claus L. Andersen
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 2927.
https://doi.org/10.1158/1538-7445.AM2016-2927
Published: 15 July 2016
View article titled, Abstract 2927: miR-625-3p regulates oxaliplatin resistance by targeting MAP2K6-p38 signalling in human colorectal adenocarcinoma cell
Journal Articles

Abstract 2774: High levels of 5-hydroxymethylcytosine (5hmC) predict biochemical recurrence after prostatectomy in ERG negative prostate cancer

Siri H. Strand, Soren Hoyer, Anne-Sofie Lynnerup, Christa Haldrup, Tine M. Storebjerg, Michael Borre, Torben F. Orntoft, Karina D. Sorensen
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 2774.
https://doi.org/10.1158/1538-7445.AM2016-2774
Published: 15 July 2016
View article titled, Abstract 2774: High levels of 5-hydroxymethylcytosine (5hmC) predict biochemical recurrence after prostatectomy in ERG negative prostate cancer
Journal Articles

Abstract 2630: Integration of tumor microenvironment and molecular subclassification of colorectal cancer identifies patient subsets with poor prognosis

Jesper B. Bramsen, Mads H. Rasmussen, Halit Ongen, Søren Vang, Philippe Lamy, Manel B. Esteller, Emmanouil T. Dermitzakis, Torben F. Orntoft, Claus L. Andersen
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 2630.
https://doi.org/10.1158/1538-7445.AM2016-2630
Published: 15 July 2016
View article titled, Abstract 2630: Integration of tumor microenvironment and molecular subclassification of colorectal cancer identifies patient subsets with poor prognosis
Journal Articles

Abstract 2379: Spatial and temporal clonal evolution during development of metastatic urothelial carcinoma

Mathilde B.H. Thomsen, Iver Nordentoft, Philippe Lamy, Soren Hoyer, Soren Vang, Jakob Hedegaard, Michael Borre, Jorgen B. Jensen, Torben F. Orntoft, Lars Dyrskjot
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 2379.
https://doi.org/10.1158/1538-7445.AM2016-2379
Published: 15 July 2016
View article titled, Abstract 2379: Spatial and temporal clonal evolution during development of metastatic urothelial carcinoma
Journal Articles

Abstract 451: Large-scale evaluation of SLC18A2 in prostate cancer reveals diagnostic and prognostic biomarker potential at three molecular levels

Christa Haldrup, Anne-Sofie Lynnerup, Tine M. Storebjerg, Søren Vang, Peter Wild, Tapio Visakorpi, Christian Arsov, Wolfgang A. Schulz, Johan Lindberg, Henrik Grönberg, Lars Egevad, Michael Borre, Torben F. Ørntoft, Søren Høyer, Karina D. Sørensen
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 451.
https://doi.org/10.1158/1538-7445.AM2016-451
Published: 15 July 2016
View article titled, Abstract 451: Large-scale evaluation of SLC18A2 in prostate cancer reveals diagnostic and prognostic biomarker potential at three molecular levels
Journal Articles

Abstract 428: Hypermethylation of GATA2 is validated as a marker of progression in non-muscle invasive bladder cancer

Kim E.M. van Kessel, Kirstin A. van der Keur, Lars Dyrskjøt, Ferran Algaba, Naeromy Welvaart, Willemien Beukers, Ulrika Segersten, Bastian Keck, Tobias Maurer, Tatjana Simic, Marcus Horstmann, Joost L. Boormans, Francisco X. Real, Nuria Malats, Per-Uno Malmström, Torben F. Ørntoft, Ellen C. Zwarthoff
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 428.
https://doi.org/10.1158/1538-7445.AM2016-428
Published: 15 July 2016
View article titled, Abstract 428: Hypermethylation of GATA2 is validated as a marker of progression in non-muscle invasive bladder cancer
Journal Articles

Abstract 5245: Identification and quantification of somatic structural variations in tumor, urine and plasma from bladder cancer patients

Karin Birkenkamp-Demtröder, Iver Nordentoft, Emil Christensen, Søren Hoyer, Thomas Reinert, Søren Vang, Jørgen Bjerggaard Jensen, Torben F. Ørntoft, Lars Dyrskjøt
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 5245.
https://doi.org/10.1158/1538-7445.AM2015-5245
Published: 01 August 2015
View article titled, Abstract 5245: Identification and quantification of somatic structural variations in tumor, urine and plasma from bladder cancer patients
Journal Articles

Abstract 3987: Exosomal microRNA in cell-free urine samples as a source for liquid prostate cancer biopsy

Thorarinn Blondal, Anni R. Thomsen, Jörg Krummheuer, Michael Borre, Jacob Fredsøe, Christa Haldrup, Ditte Andreasen, Maria W. Teilum, Niels Tolstrup, Karina D. Sørensen, Torben F. Ørntoft, Peter Mouritzen
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 3987.
https://doi.org/10.1158/1538-7445.AM2015-3987
Published: 01 August 2015
View article titled, Abstract 3987: Exosomal microRNA in cell-free urine samples as a source for liquid prostate cancer biopsy
Journal Articles

Abstract 549: A urine based assay to select patients for initial cystoscopy

Kim E.M. van Kessel, Willemien Beukers, Irene Lurkin, Kirstin A. van der Keur, Lars Dyrskjot, Ulrika Segersten, Torben F. Ørntoft, Nuria Malats, Per-Uno Malmström, Francisco X. Real, Chris H. Bangma, Ellen C. Zwarthoff
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 549.
https://doi.org/10.1158/1538-7445.AM2015-549
Published: 01 August 2015
View article titled, Abstract 549: A urine based assay to select patients for initial cystoscopy
Journal Articles

Abstract 1157: MicroRNA-625-3p is associated with response to first-line oxaliplatin-based treatment of metastatic colorectal cancer.

Mads H. Rasmussen, Niels F. Jensen, Line S. Tarpgaard, Camilla Qvortrup, Maria U. Rømer, Jan Stenvang, Tine P. Hansen, Lise-Lotte Christensen, Jan Lindebjerg, Flemming Hansen, Benny V. Jensen, Torben F. Hansen, Anders M. Jakobsen, Per Pfeiffer, Nils Brünner, Torben F. Ørntoft, Claus L. Andersen
Journal: Cancer Research
Cancer Res (2013) 73 (8_Supplement): 1157.
https://doi.org/10.1158/1538-7445.AM2013-1157
Published: 15 April 2013
View article titled, Abstract 1157: MicroRNA-625-3p is associated with response to first-line oxaliplatin-based treatment of metastatic colorectal cancer.
Journal Articles

Abstract 4701: Cancer-specific genomic rearrangements used to quantify disease burden in plasma from patients with colorectal cancer.

Lone V. Schøler, Rune Thomsen, Heidi Tobiasen, Søren Vang, Hans Jørgen Nielsen, Søren Laurberg, Torben F. Ørntoft, Claus L. Andersen
Journal: Cancer Research
Cancer Res (2013) 73 (8_Supplement): 4701.
https://doi.org/10.1158/1538-7445.AM2013-4701
Published: 15 April 2013
View article titled, Abstract 4701: Cancer-specific genomic rearrangements used to quantify disease burden in plasma from patients with colorectal cancer.
Journal Articles

Abstract 667: Prognostic value and functional impact of aberrant GABRE∼miR-452∼miR-224 promoter methylation in prostate cancer.

Helle Kristensen, Christa Haldrup, Martin M. Mortensen, Michael Borre, Søren Høyer, Peter J. Wild, Christian Arsov, Wolfgang Goering, Tapio Visakorpi, Torben F. Ørntoft, Karina D. Sørensen
Journal: Cancer Research
Cancer Res (2013) 73 (8_Supplement): 667.
https://doi.org/10.1158/1538-7445.AM2013-667
Published: 15 April 2013
View article titled, Abstract 667: Prognostic value and functional impact of aberrant <em>GABRE∼miR-452∼miR-224</em> promoter methylation in prostate cancer.
Journal Articles

Abstract 649: A three-gene DNA methylation signature for prediction of biochemical recurrence after radical prostatectomy of clinically localized prostate cancer.

Christa Haldrup, Kamilla Mundbjerg, Else Marie Vestergaard, Philippe Lamy, Peter Wild, Wolfgang A. Schulz, Christian Arsov, Michael Borre Borre, Søren Høyer, Torben F. Ørntoft, Karina D. Sørensen
Journal: Cancer Research
Cancer Res (2013) 73 (8_Supplement): 649.
https://doi.org/10.1158/1538-7445.AM2013-649
Published: 15 April 2013
View article titled, Abstract 649: A three-gene DNA methylation signature for prediction of biochemical recurrence after radical prostatectomy of clinically localized prostate cancer.
Journal Articles

Abstract 3181: Massively parallel sequencing of RNA and DNA isolated from FFPE tissue can be used for clinical studies

Jakob Hedegaard, Mette K. Lund, Liselotte Kahns, Stephen J. Hamilton-Dutoit, Henrik Hager, Søren Vang, Anne-Mette K. Hein, Mogens Kruhøffer, Bjarne Knudsen, Lars Dyrskjøt, Brian Sørensen, Torben F. Ørntoft
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 3181.
https://doi.org/10.1158/1538-7445.AM2012-3181
Published: 15 April 2012
View article titled, Abstract 3181: Massively parallel sequencing of RNA and DNA isolated from FFPE tissue can be used for clinical studies
Journal Articles

Abstract 3109: Correlation between genomic aberrations and the DNA damage response in bladder cancer

Troels Schepeler, Philippe Lamy, Jens Laurberg, Niels Fristrup, Jirina Bartkova, Vibeke Hvidbjerg, Laurence Tropia, Jiri Bartek, Thanos D. Halazonetis, Thomas Reinert, Michael Borre, Lars Dyrskjøt, Torben F. Ørntoft
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 3109.
https://doi.org/10.1158/1538-7445.AM2012-3109
Published: 15 April 2012
View article titled, Abstract 3109: Correlation between genomic aberrations and the DNA damage response in bladder cancer
Journal Articles

Abstract 3656: Cathepsin E, Maspin, PLK1, and Survivin are promising prognostic protein markers for progression in non-muscle invasive bladder cancer

Niels Fristrup, Benedicte Parm Ulhøi, Karin Birkenkamp-Demtröder, Francisco Mansilla, Marta Sanchez-Carbayo, Ulrika Segersten, Per-Uno Malmström, Arndt Hartmann, Joan Palou, Miguel Alvarez-Múgica, Karsten Zieger, Michael Borre, Torben F. Ørntoft, Lars Dyrskjøt
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 3656.
https://doi.org/10.1158/1538-7445.AM2012-3656
Published: 15 April 2012
View article titled, Abstract 3656: Cathepsin E, Maspin, PLK1, and Survivin are promising prognostic protein markers for progression in non-muscle invasive bladder cancer