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Stephen Benz
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Journal Articles

Abstract PD5-08: Tumor immune-cell activity assessed by RNAseq is an independent predictor of therapy response and prognosis after neoadjuvant chemotherapy in HER2 negative breast cancer patients - An analysis of the GeparSepto trial

Peter A Fasching, Carsten Denkert, Stephen Benz, Karsten E Weber, Christopher Szeto, Jan Budczies, Andreas Schneeweiss, Elmar Stickeler, Sabine Schmatloch, Christian Jackisch, Thomas Karn, Hans Peter Sinn, Mathias Warm, Marion van Mackelenbergh, Sharooz Rabizadeh, Christian Schem, Ernst Heinmöller, Volkmar Müller, Frederik Marmé, Patrick Soon-Shiong, Valentina Nekljudova, Michael Untch, Sibylle Loibl
Journal: Cancer Research
Cancer Res (2020) 80 (4_Supplement): PD5-08.
DOI: https://doi.org/10.1158/1538-7445.SABCS19-PD5-08
Published: 15 February 2020
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Journal Articles

Abstract P6-10-04: Landscape of immune-cell signatures in early high-risk breast cancer (BC) reveals clinically-relevant enrichment of immune subpopulations

Christopher Szeto, Carsten Denkert, Peter A Fasching, Stephen Benz, Karsten E Weber, Jan Budczies, Andreas Schneeweiss, Elmar Stickeler, Sabine Schmatloch, Christian Jackisch, Thomas Karn, Hans P Sinn, Mathias Warm, Marion van Mackelenbergh, Shahrooz Rabizadeh, Christian Schem, Ernst Heinmöller, Volkmar Müller, Frederik Marmé, Patrick Soon-Shiong, Valentina Nekljudova, Sibylle Loibl, Michael Untch
Journal: Cancer Research
Cancer Res (2020) 80 (4_Supplement): P6-10-04.
DOI: https://doi.org/10.1158/1538-7445.SABCS19-P6-10-04
Published: 15 February 2020
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Journal Articles

Abstract 3314: Normal breast tissue at risk for cancer development: A breast cancer initiating role for mammary adipocytes

Taekyu Kang, Christina Yau, Stephen Benz, Gregor Krings, Roman Camarda, Jill E. Henry, Mark Powell, Christopher C. Benz
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 3314.
DOI: https://doi.org/10.1158/1538-7445.AM2019-3314
Published: 01 July 2019
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Journal Articles

Abstract 3888: The NantOmics Pharmacogenomics Test: An integrative panomic approach to pharmacogenomics screening

Camille Schwartz, John Little, Charles Vaske, Stephen Benz, Patrick Soon-Shiong, Shahrooz Rabizadeh, J. Zachary Sanborn
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 3888.
DOI: https://doi.org/10.1158/1538-7445.AM2018-3888
Published: 01 July 2018
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Journal Articles

Abstract 1084: An EMT-like gene expression profile differentiates helical from kinase domain PIK3CA mutations

Christina Yau, Joe Garay, Stephen Benz, Joe Gray, Ben Park, Christopher C. Benz
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 1084.
DOI: https://doi.org/10.1158/1538-7445.AM2015-1084
Published: 01 August 2015
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Journal Articles

Abstract 4165: Differential pathway activation associated with domain-specific PIK3CA mutations

Christina Yau, Stephen Benz, Charles Vaske, Sam Ng, Josh Stuart, Christopher C. Benz
Journal: Cancer Research
Cancer Res (2014) 74 (19_Supplement): 4165.
DOI: https://doi.org/10.1158/1538-7445.AM2014-4165
Published: 01 October 2014
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Journal Articles

Abstract 1813: FOXM1 target genes associated with cell cycle regulation predict breast cancer metastatic outcome.

Christina Yau, Laurence Meyer, Stephen Benz, Charles Vaske, Gary Scott, Brian Egan, Paul Labhart, Elizabeth Mitchell, Nader Pourmand, Christopher Benz
Journal: Cancer Research
Cancer Res (2013) 73 (8_Supplement): 1813.
DOI: https://doi.org/10.1158/1538-7445.AM2013-1813
Published: 15 April 2013
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Journal Articles

Abstract 2985: Predicting the impact of mutations in cancer using an integrated pathway approach

Sam Ng, Janita Thusberg, Stephen Benz, Charles Vaske, Kyle Ellrott, Jing Zhu, Christina Yau, Eric Collisson, Sean Mooney, Christopher Benz, David Haussler, Joshua Stuart
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 2985.
DOI: https://doi.org/10.1158/1538-7445.AM2012-2985
Published: 15 April 2012
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Journal Articles

Abstract 5085: TopModel: An online resource for predictive models in cancer

Christopher W. Szeto, Artem Sokolov, Stephen Benz, Joshua Stuart, David Haussler
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 5085.
DOI: https://doi.org/10.1158/1538-7445.AM2012-5085
Published: 15 April 2012
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Journal Articles

Abstract 43: Using matrix factorization to discover clinically-relevant molecular signatures across cancers

Christopher W. Szeto, Jingchun Zhu, James Durbin, Stephen Benz, Charles Vaske, Joshua Stuart, David Haussler
Journal: Cancer Research
Cancer Res (2011) 71 (8_Supplement): 43.
DOI: https://doi.org/10.1158/1538-7445.AM2011-43
Published: 15 April 2011
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Journal Articles

Abstract 2015: Patient-specific pathway analysis using DIGMA identifies key activities in multiple cancers

Stephen Benz, Charles Vaske, J. Zachary Sanborn, Joshua Stuart, David Haussler
Journal: Cancer Research
Cancer Res (2010) 70 (8_Supplement): 2015.
DOI: https://doi.org/10.1158/1538-7445.AM10-2015
Published: 15 April 2010
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Journal Articles

Abstract 2001: Non-negative matrix factorization (NMF) as a clinical classifier: An example with chemotherapy response in ovarian cancer

Szeto Christopher, Stephen Benz, Charles Vaske, J. Zachary Sanborn, Jing Zhu, Joshua Stuart, David Haussler
Journal: Cancer Research
Cancer Res (2010) 70 (8_Supplement): 2001.
DOI: https://doi.org/10.1158/1538-7445.AM10-2001
Published: 15 April 2010
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Journal Articles

Abstract #1410: Identification of distinct global Copy Number Alteration signatures in different human cancer types and mouse models with the UCSC Cancer Genomics Browser

Ting Wang, Christopher Szeto, Jingchu Zhu, J. Zachary Sanborn, Stephen Benz, David Haussler
Journal: Cancer Research
Cancer Res (2009) 69 (9_Supplement): 1410.
Published: 01 May 2009
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Journal Articles

Abstract #2462: UCSC BioIntegrator: A multi-platform analysis pipeline

J. Sanborn, Stephen Benz, Jing Zhu, Christopher Szeto, Ting Wang, David Haussler
Journal: Cancer Research
Cancer Res (2009) 69 (9_Supplement): 2462.
Published: 01 May 2009
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Journal Articles

Abstract #2469: UCSC cancer genomics browser

Jingchun Zhu, J. Sanborn, Stephen Benz, Fan Hsu, Christopher Szeto, Robert Kuhn, Donna Karolchik, John Archie, Marc Lenburg, Laura Esserman, W. Kent, David Haussler, Ting Wang
Journal: Cancer Research
Cancer Res (2009) 69 (9_Supplement): 2469.
Published: 01 May 2009
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Journal Articles

Breast Cancer Growth Prevention by Statins

Michael J. Campbell, Laura J. Esserman, Yamei Zhou, Mark Shoemaker, Margaret Lobo, Elizabeth Borman, Frederick Baehner, Anjali S. Kumar, Kelly Adduci, Corina Marx, Emanuel F. Petricoin, Lance A. Liotta, Mary Winters, Stephen Benz, Christopher C. Benz
Journal: Cancer Research
Cancer Res (2006) 66 (17): 8707–8714.
DOI: https://doi.org/10.1158/0008-5472.CAN-05-4061
Published: 01 September 2006
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Journal Articles

Therapeutic destabilization of ErbB2 transcripts mediated by U-rich mRNA binding proteins and microRNAs.

Corina Marx, Crystal Berger, Stephen Benz, Michael Mattie, Christopher C. Benz, Gary K. Scott
Journal: Cancer Research
Cancer Res (2006) 66 (8_Supplement): 1320.
Published: 15 April 2006
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