Page 1 | Search Results | Cancer Research | American Association for Cancer Research

1-20 of 28

Sort by

Sort Order Select

Journal Articles

Longitudinal Profiling of Circulating Tumor DNA Reveals the Evolutionary Dynamics of Metastatic Prostate Cancer during Serial Therapy

Yuehui Zhao, Naveen Ramesh, Ping Xu, Emi Sei, Min Hu, Shanshan Bai, Patricia Troncoso, Ana M. Aparicio, Christopher J. Logothetis, Paul G. Corn, Nicholas E. Navin, Amado J. Zurita

Cancer Res (2025) 85 (9): 1680–1695.

https://doi.org/10.1158/0008-5472.CAN-24-1943

Published: 02 May 2025

View articletitled, Longitudinal Profiling of Circulating Tumor DNA Reveals the Evolutionary Dynamics of Metastatic Prostate Cancer during Serial Therapy

Includes: Supplementary data

Journal Articles

Abstract 6438: Decoding the archetypes and ecotypes of triple-negative breast cancer in responses to chemotherapy

Cancer Res (2025) 85 (8_Supplement_1): 6438.

https://doi.org/10.1158/1538-7445.AM2025-6438

Published: 21 April 2025

View articletitled, Abstract 6438: Decoding the archetypes and ecotypes of triple-negative breast cancer in responses to chemotherapy

Journal Articles

Abstract A006: Copy number analysis of single-cell methylomes reveal distinct subclone methylation in early breast cancer

Ryan M Mulqueen, Mariam Mosaad, Shanshan Bai, Jiahong Li, Emi Sei, Bora Lim, Savitri Krishnamurthy, Alastair Thompson, Nicholas Navin

Cancer Res (2025) 85 (3_Supplement): A006.

https://doi.org/10.1158/1538-7445.DNAMETHYLATION-A006

Published: 01 February 2025

View articletitled, Abstract A006: Copy number analysis of single-cell methylomes reveal distinct subclone methylation in early breast cancer

Journal Articles

Abstract 780: Normal breast tissues harbor rare populations of aneuploid epithelial cells

Yiyun Lin, Junke Wang, Kaile Wang, Shanshan Bai, Aatish Thennavan, Runmin Wei, Yun Yan, Jianzhuo Li, Heba Elgamal, Emi Sei, Anna Casasent, Mitchell Rao, Chenling Tang, Jessica Montalvan, Chandandeep Nagi, Sebastrian Winocour, Bora Lim, Alastair Thompson, Nicholas Navin

Cancer Res (2024) 84 (6_Supplement): 780.

https://doi.org/10.1158/1538-7445.AM2024-780

Published: 22 March 2024

View articletitled, Abstract 780: Normal breast tissues harbor rare populations of aneuploid epithelial cells

Journal Articles

Abstract 5483: Macrospatial ecotype heterogeneity in early-stage breast cancer identified by spatial nucleus barcoding

Kaile Wang, Zhenna Xiao, Yiyun Lin, Runmin Wei, Shanshan Bai, Jie Ye, Rui Ye, Min Hu, Aatish Thennavan, Emi Sei, Alastair Thompson, Savitri Krishnamurthy, Nicholas Navin

Cancer Res (2024) 84 (6_Supplement): 5483.

https://doi.org/10.1158/1538-7445.AM2024-5483

Published: 22 March 2024

View articletitled, Abstract 5483: Macrospatial ecotype heterogeneity in early-stage breast cancer identified by spatial nucleus barcoding

Journal Articles

Abstract 1749: Esophageal adenocarcinoma single-cell resolution ecotypes and subtypes mediate chemoradiation resistance

Rui Ye, Yawei Qiao, Shanshan Bai, Emi Sei, Min Hu, Jianzhong He, Nan Li, Yifan Wang, Pablo Lopez, Wei Zhang, Fei Ye, Brian Weston, Emmanuel Coronel, William Ross, Phillip Ge, Bhutani Manoop, Nicholas Navin, Steven Lin

Cancer Res (2024) 84 (6_Supplement): 1749.

https://doi.org/10.1158/1538-7445.AM2024-1749

Published: 22 March 2024

View articletitled, Abstract 1749: Esophageal adenocarcinoma single-cell resolution ecotypes and subtypes mediate chemoradiation resistance

Journal Articles

Abstract 6937: High throughput single cell simultaneous DNA and RNA sequencing identified cell-of-origin of breast cancer

Kaile Wang, Rui Ye, Shanshan Bai, Zhenna Xiao, Lei Yano, Jianzhuo Li, Yiyun Lin, Emi Sei, Steven Lin, Alastair Thompson, Savitri Krishnamurthy, Nicholas Navin

Cancer Res (2024) 84 (6_Supplement): 6937.

https://doi.org/10.1158/1538-7445.AM2024-6937

Published: 22 March 2024

View articletitled, Abstract 6937: High throughput single cell simultaneous DNA and RNA sequencing identified cell-of-origin of breast cancer

Journal Articles

Abstract 6933: Decoding the archetypes and eco-hubs of triple-negative breast cancer in responses to chemotherapy

Yun Yan, Yiyun Lin, Tapsi Kumar, Shanshan Bai, Jianzhuo Li, Tuan Tran, Min Hu, Elizabeth Ravenberg, Maia Rauch, Alyson Clayborn, Alastair Thompson, Bora Lim, Lei Huo, Stacy Moulder, Clinton Yam, Nicholas Navin

Cancer Res (2024) 84 (6_Supplement): 6933.

https://doi.org/10.1158/1538-7445.AM2024-6933

Published: 22 March 2024

View articletitled, Abstract 6933: Decoding the archetypes and eco-hubs of triple-negative breast cancer in responses to chemotherapy

Journal Articles

Abstract 76: Reprogramming of the preinvasive breast microenvironment identified by spatial nucleus barcoding

Kaile Wang, Zhenna Xiao, Yiyun Lin, Runmin Wei, Jie Ye, Rui Ye, Min Hu, Shanshan Bai, Emi Sei, Aatish Thennavan, Bora Lim, Andrew Futreal, Alastair Thompson, Savitri Krishnamurthy, Nicholas Navin

Cancer Res (2023) 83 (7_Supplement): 76.

https://doi.org/10.1158/1538-7445.AM2023-76

Published: 04 April 2023

View articletitled, Abstract 76: Reprogramming of the preinvasive breast microenvironment identified by spatial nucleus barcoding

Journal Articles

Abstract 125: Archival single cell sequencing reveals persistent subclones over years to decades of DCIS progression

Cancer Res (2023) 83 (7_Supplement): 125.

https://doi.org/10.1158/1538-7445.AM2023-125

Published: 04 April 2023

View articletitled, Abstract 125: Archival single cell sequencing reveals persistent subclones over years to decades of DCIS progression

Journal Articles

Abstract 3131: Anaplastic transformation model in thyroid cancer revealed by single cell lineage and fate analysis

Cancer Res (2023) 83 (7_Supplement): 3131.

https://doi.org/10.1158/1538-7445.AM2023-3131

Published: 04 April 2023

View articletitled, Abstract 3131: Anaplastic transformation model in thyroid cancer revealed by single cell lineage and fate analysis

Journal Articles

Abstract 2147: Decoding the natural biology of triple-negative breast cancer and response to chemotherapy by single-cell transcriptomics

Tapsi Kumar, Yiyun Lin, Yun Yan, Shanshan Bai, Jianzhuo Li, Tuan Tran, Min Hu, Elizabeth Ravenberg, Maia Rauch, Alyson Clayborn, Alastair Thompson, Lei Huo, Stacy Moulder, Clinton Yam, Nicholas Navin

Cancer Res (2023) 83 (7_Supplement): 2147.

https://doi.org/10.1158/1538-7445.AM2023-2147

Published: 04 April 2023

View articletitled, Abstract 2147: Decoding the natural biology of triple-negative breast cancer and response to chemotherapy by single-cell transcriptomics

Journal Articles

Abstract 3308: Chemoradiation sensitization effect of PARPi in non-small cell lung cancer

Rui Ye, Kaile Wang, Yawei Qiao, Zhenna Xiao, Yun Yan, Jianzhong He, Nan Li, Yifan Wang, Min Hu, Shanshan Bai, Emi Sei, Nicholas Navin, Steven Lin

Cancer Res (2022) 82 (12_Supplement): 3308.

https://doi.org/10.1158/1538-7445.AM2022-3308

Published: 15 June 2022

View articletitled, Abstract 3308: Chemoradiation sensitization effect of PARPi in non-small cell lung cancer

Journal Articles

Abstract 2847: Simultaneous TCR and transcriptomic sequencing of single Tcells defines biological subtypes in pancreatic cancer for adoptive Tcell therapy

Aislyn Schalck, Donastas Sakellariou-Thompson, Marie-Andrée Forget, Emi Sei, Tara Hughes, Shanshan Bai, Min Hu, Tapsi Kumar, Mark Hurd, Matthew Katz, Chine-Wei Tzeng, Shubham Pant, Milind Javle, Anirban Maitra, Cara Haymaker, Michael Kim, Nicholas Navin, Chantale Bernatchez

Cancer Res (2022) 82 (12_Supplement): 2847.

https://doi.org/10.1158/1538-7445.AM2022-2847

Published: 15 June 2022

View articletitled, Abstract 2847: Simultaneous TCR and transcriptomic sequencing of single Tcells defines biological subtypes in pancreatic cancer for adoptive Tcell therapy

Journal Articles

Abstract 3791: Investigating longitudinal therapeutic resistance in serially treated metastatic castration resistant prostate cancer by liquid biopsy genome sequencing

Yuehui Zhao, Naveen Ramesh, Emi Sei, Min Hu, Shanshan Bai, Patricia Troncoso, Paul Corn, Ana Aparicio, Christopher J. Logothetis, Nicholas E. Navin, Amado J. Zurita

Cancer Res (2022) 82 (12_Supplement): 3791.

https://doi.org/10.1158/1538-7445.AM2022-3791

Published: 15 June 2022

View articletitled, Abstract 3791: Investigating longitudinal therapeutic resistance in serially treated metastatic castration resistant prostate cancer by liquid biopsy genome sequencing

Journal Articles

Abstract 2129: Spatial charting of single cell transcriptomes in tissues

Runmin Wei, Siyuan He, Shanshan Bai, Emi Sei, Min Hu, Alastair Thompson, Ken Chen, Savitri Krishnamurthy, Nicholas Navin

Cancer Res (2022) 82 (12_Supplement): 2129.

https://doi.org/10.1158/1538-7445.AM2022-2129

Published: 15 June 2022

View articletitled, Abstract 2129: Spatial charting of single cell transcriptomes in tissues

Journal Articles

Abstract 93: Single cell transcriptome analysis maps dynamic epithelial mesenchymal transition and immunological remodeling in thyroid cancer progression

Xi Chen, Jennifer Rui Wang, Ying Henderson, Yuanqing Yan, Shanshan Bai, Rachel Kieser, Min Hu, Jiping Wang, Nicholas Navin, Stephen Lai, Ruli Gao

Cancer Res (2021) 81 (13_Supplement): 93.

https://doi.org/10.1158/1538-7445.AM2021-93

Published: 01 July 2021

View articletitled, Abstract 93: Single cell transcriptome analysis maps dynamic epithelial mesenchymal transition and immunological remodeling in thyroid cancer progression

Journal Articles

Abstract PO-020: Inferring copy number substructure from single-cell transcriptomics in human tumors with CopyKat

Ruli Gao, Shanshan Bai, Henderson Ying, Yiyun Lin, Tapsi Seth, Min Hu, Emi Sei, Alexander Davis, Fang Wang, Jennifer Rui Wang, Ken Chen, Stacey Moulder, Stephen Lai, Nicholas Navin

Cancer Res (2020) 80 (21_Supplement): PO-020.

https://doi.org/10.1158/1538-7445.TUMHET2020-PO-020

Published: 03 November 2020

View articletitled, Abstract PO-020: Inferring copy number substructure from single-cell transcriptomics in human tumors with CopyKat

Journal Articles

Abstract PO-133: Breast tumors maintain a reservoir of subclonal diversity during primary expansion

Cancer Res (2020) 80 (21_Supplement): PO-133.

https://doi.org/10.1158/1538-7445.TUMHET2020-PO-133

Published: 03 November 2020

View articletitled, Abstract PO-133: Breast tumors maintain a reservoir of subclonal diversity during primary expansion

Journal Articles

Abstract 5702: A spatially resolved single cell atlas of the human breast

Tapsi Kumar, Quy Nguyen, Kevin Nee, Shanshan Bai, Min Hu, Emi Sei, Anita Wood, Jie Wiley, Hui Chen, Alejandro Contreras, Mediget Teshome, Ken Chen, Bora Lim, Devon Lawson, Nicholas Navin, Kai Kessenbrock

Cancer Res (2020) 80 (16_Supplement): 5702.

https://doi.org/10.1158/1538-7445.AM2020-5702

Published: 15 August 2020

View articletitled, Abstract 5702: A spatially resolved single cell atlas of the human breast

Update search

NARROW

Format

Subjects

Journal

Article Type

Issue Section

Date

Availability

Longitudinal Profiling of Circulating Tumor DNA Reveals the Evolutionary Dynamics of Metastatic Prostate Cancer during Serial Therapy

Abstract 6438: Decoding the archetypes and ecotypes of triple-negative breast cancer in responses to chemotherapy

Abstract A006: Copy number analysis of single-cell methylomes reveal distinct subclone methylation in early breast cancer

Abstract 780: Normal breast tissues harbor rare populations of aneuploid epithelial cells

Abstract 5483: Macrospatial ecotype heterogeneity in early-stage breast cancer identified by spatial nucleus barcoding

Abstract 1749: Esophageal adenocarcinoma single-cell resolution ecotypes and subtypes mediate chemoradiation resistance

Abstract 6937: High throughput single cell simultaneous DNA and RNA sequencing identified cell-of-origin of breast cancer

Abstract 6933: Decoding the archetypes and eco-hubs of triple-negative breast cancer in responses to chemotherapy

Abstract 76: Reprogramming of the preinvasive breast microenvironment identified by spatial nucleus barcoding

Abstract 125: Archival single cell sequencing reveals persistent subclones over years to decades of DCIS progression

Abstract 3131: Anaplastic transformation model in thyroid cancer revealed by single cell lineage and fate analysis

Abstract 2147: Decoding the natural biology of triple-negative breast cancer and response to chemotherapy by single-cell transcriptomics

Abstract 3308: Chemoradiation sensitization effect of PARPi in non-small cell lung cancer

Abstract 2847: Simultaneous TCR and transcriptomic sequencing of single Tcells defines biological subtypes in pancreatic cancer for adoptive Tcell therapy

Abstract 3791: Investigating longitudinal therapeutic resistance in serially treated metastatic castration resistant prostate cancer by liquid biopsy genome sequencing

Abstract 2129: Spatial charting of single cell transcriptomes in tissues

Abstract 93: Single cell transcriptome analysis maps dynamic epithelial mesenchymal transition and immunological remodeling in thyroid cancer progression

Abstract PO-020: Inferring copy number substructure from single-cell transcriptomics in human tumors with CopyKat

Abstract PO-133: Breast tumors maintain a reservoir of subclonal diversity during primary expansion

Abstract 5702: A spatially resolved single cell atlas of the human breast

Email alerts

AACR Journals

Update search

Email alerts

AACR Journals

This Feature Is Available To Subscribers Only