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Saravana M. Dhanasekaran
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Journal Articles

Abstract 5217: Genome instability in renal tumors

Hanbyul Cho, Ginny X. Li, Rahul Mannan, Noshad Hosseini, Yi Hsiao, Yuping Zhang, Aniket Dagar, Chandan Kumar-Sinha, Marcin P. Cieslik, Saravana M. Dhanasekaran, Alexey I. Nesvizhskii, Arul M. Chinnaiyan, Clinical Proteomic Tumor Analysis Consortium
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 5217.
https://doi.org/10.1158/1538-7445.AM2024-5217
Published: 22 March 2024
View article titled, Abstract 5217: Genome instability in renal tumors
Journal Articles

Abstract 7354: Proteogenomic and metabolomic characterization of acute myeloid leukemia

Alec Chu, Yi Hsiao, Yamei Deng, Chenwei Wang, Jennifer Kyle, Yongchao Dou, James C. Pino, Camilo Posso, Leanne Henry, Lijun Chen, Ginny Xiaohe Li, Tung-Shing Mamie Lih, Yifat Geffen, Fengchao Yu, Li Ding, Gil Omenn, Chandan Kumar, Saravana M. Dhanasekaran, Elie Traer, Jeffrey W. Tyner, Hui Zhang, Tao Liu, Sara Gosline, Bing Zhang, Arul Chinnaiyan, Alexey I. Nesvizhskii, Marcin Cieslik, The CPTAC Consortium
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 7354.
https://doi.org/10.1158/1538-7445.AM2024-7354
Published: 22 March 2024
View article titled, Abstract 7354: Proteogenomic and metabolomic characterization of acute myeloid leukemia
Journal Articles

Abstract A067: Cellular cartography reveals transcriptional specificity and spatial organization of diverse luminal epithelial cells in the murine prostate

Hanbyul Cho, Yuping Zhang, Jean Tien, Jie Luo, June E. Wilke, Saravana M. Dhanasekaran, Rahul Mannan, Lisha Wang, Fengyun Su, Rui Wang, Evan T. Keller, Xuhong Cao, Sethu Pitchaya, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2023) 83 (11_Supplement): A067.
https://doi.org/10.1158/1538-7445.PRCA2023-A067
Published: 02 June 2023
View article titled, Abstract A067: Cellular cartography reveals transcriptional specificity and spatial organization of diverse luminal epithelial cells in the murine prostate
Journal Articles

Abstract 3127: Comprehensive proteogenomic characterization of rare kidney tumors

Ginny Xiaohe Li, Yi Hsiao, Lijun Chen, Rahul Mannan, Yuping Zhang, Francesca Petralia, Hanbyul Cho, Noshad Hosseini, Anna Calinawan, Yize Li, Shankara Anand, Aniket Dagar, Yifat Geffen, Felipe V. Leprevost, Anne Le, Sean Ponce, Michael Schnaubelt, Nataly Naser Al Deen, Wagma Caravan, Andrew Houston, Chandan Kumar-Sinha, Xiaoming Wang, Seema Chugh, Gilbert S. Omenn, Daniel W. Chan, Christopher Ricketts, Rohit Mehra, Arul Chinnaiyan, Li Ding, Marcin Cieslik, Hui Zhang, Saravana M. Dhanasekaran, Alexey I. Nesvizhskii
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 3127.
https://doi.org/10.1158/1538-7445.AM2023-3127
Published: 04 April 2023
View article titled, Abstract 3127: Comprehensive proteogenomic characterization of rare kidney tumors
Journal Articles

Abstract 3383: Circular RNAs as non-invasive diagnostic biomarkers for prostate cancer

Palak Shah, Pushpinder Bawa, Lanbo Xiao, Yelena Kleyman, Josh Vo, Saravana M. Dhanasekaran, Jason Brown, Nicolette Loeding, Alexander Koons, Javed Siddiqui, Xuhong Cao, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 3383.
https://doi.org/10.1158/1538-7445.AM2022-3383
Published: 15 June 2022
View article titled, Abstract 3383: Circular RNAs as non-invasive diagnostic biomarkers for prostate cancer
Journal Articles

Abstract 5118: Proteogenomics characterization of HPV-negative head and neck squamous cell carcinomas

Chen Huang, Lijun Chen, Yize Li, Sara Savage, Michael Schnaubelt, Felipe V. Leprevost, Marcin Cieslik, Yongchao Dou, Bo Wen, Jonathan T. Lei, Kai Li, Eric Jaehnig, Zhiao Shi, Meenakshi Anurag, Jianbo Pan, Yingwei Hu, Rodrigo V. Eguez, David J. Clark, Matthew Wyczalkowski, Saravana M. Dhanasekaran, Chandan Kumar, Antonio Colaprico, Karsten Krug, Michael Gillette, D. R. Mani, Seungyeul Yoo, Jiayi Ji, Xiaoyu Song, Weiping Ma, Xi Steven Chen, Alex Pico, Nathan J. Edwards, Scott D. Jewell, Mathangi Thiagarajan, Emily S. Boja, Henry Rodriguez, Andrew Sikora, Pei Wang, Matthew Ellis, Gilbert S. Omenn, Li Ding, Alexey I. Nesvizhskii, Adel K. EI-Naggar, Daniel W. Chan, Hui Zhang, Bing Zhang, Clinical Proteomic Tumor Analysis Consortium
Journal: Cancer Research
Cancer Res (2020) 80 (16_Supplement): 5118.
https://doi.org/10.1158/1538-7445.AM2020-5118
Published: 15 August 2020
View article titled, Abstract 5118: Proteogenomics characterization of HPV-negative head and neck squamous cell carcinomas
Journal Articles

Abstract 3573: Identification and functional characterization of prognostic long non coding RNA LADDER in lung cancer

Sathiya Pandi Narayanan, Sudhanshu Shukla, Jean Tien, Palak Shah, Sunita Shankar, Sethuramasundaram Pitchaiya, Srihari Srinivasan, Yuping Zhang, Xiaoming Wang, Lanbo Xiao, Xuhong Cao, Susan Freier, Andrew Watt, Shuling Guo, Felix Feng, David Beer, Saravana M. Dhanasekaran, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 3573.
https://doi.org/10.1158/1538-7445.AM2019-3573
Published: 01 July 2019
View article titled, Abstract 3573: Identification and functional characterization of prognostic long non coding RNA LADDER in lung cancer
Journal Articles

Abstract 2836: Spatially resolved single-cell analysis of cellular plasticity and mechanisms of drug resistance

Sethuramasundaram Pitchiaya, Jeremy D'silva, Nicole Lee, Sathiyapandi Narayanan, Xia Jiang, Saravana M. Dhanasekaran, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 2836.
https://doi.org/10.1158/1538-7445.AM2018-2836
Published: 01 July 2018
View article titled, Abstract 2836: Spatially resolved single-cell analysis of cellular plasticity and mechanisms of drug resistance
Journal Articles

Abstract 5342: Somatic bi-allelic loss of TSC genes in eosinophilic solid and cystic renal cell carcinoma (ESC RCC)

Nicole D. Lee, Pankaj Vats, Xuhong Cao, Fengyun Su, Robert Lonigro, Kumpati Premkumar, Kiril Trpkov, Jesse K. McKenney, Rohit Mehra, Saravana M. Dhanasekaran, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 5342.
https://doi.org/10.1158/1538-7445.AM2018-5342
Published: 01 July 2018
View article titled, Abstract 5342: Somatic bi-allelic loss of TSC genes in eosinophilic solid and cystic renal cell carcinoma (ESC RCC)
Journal Articles

Abstract LB-008: KRAS engages AGO2 to enhance cellular transformation

Sunita Shankar, Sethuramasundaram Pitchiaya, Rohit Malik, Vishal Kothari, Yasuyuki Hosono, Anastasia K. Yocum, Harika Gundlapalli, Yasmine White, Ari Firestone, Xuhong Cao, Saravana M. Dhanasekaran, Jeanne Stuckey, Gideon Bollag, Kevin Shannon, Nils Walter, Chandan Kumar-Sinha, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): LB-008.
https://doi.org/10.1158/1538-7445.AM2016-LB-008
Published: 15 July 2016
View article titled, Abstract LB-008: KRAS engages AGO2 to enhance cellular transformation
Journal Articles

Abstract LB-058: Novel interactions of the RAS oncoprotein

Sunita Shankar, Rohit Malik, Vishal Kothari, Yasuyuki Hosono, Sethuramasundaram Pitchiaya, Shanker Kalyana-Sundaram, Anastasia Yocum, June Escara-Wilke, Harika Gundlapalli, Krishnapriya Chinnaswamy, Matthew Shuler, Anton Poliakov, Xiaoju Wang, Vishalakshi Krishnan, Yasmine White, Ari Firestone, Xuhong Cao, Saravana M. Dhanasekaran, Jeanne Stuckey, Gideon Bollag, Kevin Shannon, Nils G. Walter, Chandan Kumar-Sinha, Arul Chinnaiyan
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): LB-058.
https://doi.org/10.1158/1538-7445.AM2015-LB-058
Published: 01 August 2015
View article titled, Abstract LB-058: Novel interactions of the RAS oncoprotein
Journal Articles

Abstract LB-132: The central role of EED in orchestration of polycomb group complexes

Qi Cao, Xiaoju Wang, Meng Zhao, Rendong Yang, Rohit Malik, Yuanyuan Qiao, Anton Poliakov, Xuhong Cao, Clair Harris, Felix Y. Feng, Sundeep Kalantry, Zhaohui Qin, Saravana M. Dhanasekaran, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2014) 74 (19_Supplement): LB-132.
https://doi.org/10.1158/1538-7445.AM2014-LB-132
Published: 01 October 2014
View article titled, Abstract LB-132: The central role of EED in orchestration of polycomb group complexes
Journal Articles

Abstract C36: Transcriptome sequencing identifies PCAT-1, a novel lncRNA implicated in prostate cancer progression and therapeutic response to PARP inhibitors

John R. Prensner, Hari K. Iyer, Christopher A. Maher, Felix Feng, Arul M. Chinnaiyan, Matthew K. Iyer, Wei Chen, O. Alejandro Balbin, Saravana M. Dhanasekaran, Qi Cao, Xuhong Cao, Xiaojun Jing, Daniel Robinson
Journal: Cancer Research
Cancer Res (2012) 72 (4_Supplement): C36.
https://doi.org/10.1158/1538-7445.PRCA2012-C36
Published: 09 May 2013
View article titled, Abstract C36: Transcriptome sequencing identifies PCAT-1, a novel lncRNA implicated in prostate cancer progression and therapeutic response to PARP inhibitors
Journal Articles

Abstract 2808: Characterization of KRAS rearrangements in metastatic prostate cancer

Xiao-Song Wang, Sunita Shankar, Saravana M. Dhanasekaran, Bushra Ateeq, Atsuo T. Sasaki, Xiaojun Jing, Daniel Robinson, Qi Cao, Anuradha Gopalan, Victor E. Reuter, Lewis C. Cantley, Mark A. Rubin, Nallasivam Palanisamy, Sooryanarayana Varambally, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2011) 71 (8_Supplement): 2808.
https://doi.org/10.1158/1538-7445.AM2011-2808
Published: 15 April 2011
View article titled, Abstract 2808: Characterization of KRAS rearrangements in metastatic prostate cancer
Journal Articles

Abstract 4707: Discovery and characterization of PCAT-1, a novel lincRNA implicated in prostate cancer tumorigenesis

John R. Prensner, Matthew K. Iyer, O. Alejandro Balbin, Saravana M. Dhanasekaran, Qi Cao, J. Chad Brenner, Irfan Asangani, Catherine Grasso, Hal D. Kominsky, Xuhong Cao, Xiaojun Jing, Javed Siddiqui, John T. Wei, Nallasivam Palanisamy, Daniel Robinson, Hari Iyer, Christopher A. Maher, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2011) 71 (8_Supplement): 4707.
https://doi.org/10.1158/1538-7445.AM2011-4707
Published: 15 April 2011
View article titled, Abstract 4707: Discovery and characterization of PCAT-1, a novel lincRNA implicated in prostate cancer tumorigenesis
Journal Articles

Abstract 929: Transcriptome sequencing identifies novel non-coding RNAs associated with prostate cancer progression

Matthew K. Iyer, John R. Prensner, Oscar A. Balbin, Saravana M. Dhanasekaran, Qi Cao, John C. Brenner, Irfan A. Asangani, Catherine Grasso, Hal D. Kominsky, Xuhong Cao, Xiaojun Jing, Javed Siddiqui, John T. Wei, Nallasivam Palanisamy, Daniel Robinson, Hariharan K. Iyer, Christopher A. Maher, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2011) 71 (8_Supplement): 929.
https://doi.org/10.1158/1538-7445.AM2011-929
Published: 15 April 2011
View article titled, Abstract 929: Transcriptome sequencing identifies novel non-coding RNAs associated with prostate cancer progression
Journal Articles

Abstract 2214: An integrative approach to reveal driver gene fusions from paired end sequencing data in cancer

Xiaosong Wang, John R. Prensner, Guoan Chen, Qi Cao, Bo Han, Saravana M. Dhanasekaran, Rakesh Ponnala, David G. Beer, Nallasivam Palanisamy, Maureen Sartor, Gilbert S. Omenn, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2010) 70 (8_Supplement): 2214.
https://doi.org/10.1158/1538-7445.AM10-2214
Published: 15 April 2010
View article titled, Abstract 2214: An integrative approach to reveal driver gene fusions from paired end sequencing data in cancer
Journal Articles

A Fluorescence In situ Hybridization Screen for E26 Transformation–Specific Aberrations: Identification of DDX5-ETV4 Fusion Protein in Prostate Cancer

Bo Han, Rohit Mehra, Saravana M. Dhanasekaran, Jindan Yu, Anjana Menon, Robert J. Lonigro, Xiaosong Wang, Yusong Gong, Lei Wang, Sunita Shankar, Bharathi Laxman, Rajal B. Shah, Sooryanarayana Varambally, Nallasivam Palanisamy, Scott A. Tomlins, Chandan Kumar-Sinha, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2008) 68 (18): 7629–7637.
https://doi.org/10.1158/0008-5472.CAN-08-2014
Published: 14 September 2008
View article titled, A Fluorescence <em>In situ</em> Hybridization Screen for E26 Transformation–Specific Aberrations: Identification of DDX5-ETV4 Fusion Protein in Prostate Cancer
Open the PDF for A Fluorescence <em>In situ</em> Hybridization Screen for E26 Transformation–Specific Aberrations: Identification of DDX5-ETV4 Fusion Protein in Prostate Cancer in another window
Includes: Supplementary data
Journal Articles

Integrative Analysis of Genomic Aberrations Associated with Prostate Cancer Progression

Jung H. Kim, Saravana M. Dhanasekaran, Rohit Mehra, Scott A. Tomlins, Wenjuan Gu, Jianjun Yu, Chandan Kumar-Sinha, Xuhong Cao, Atreya Dash, Lei Wang, Debashis Ghosh, Kerby Shedden, James E. Montie, Mark A. Rubin, Kenneth J. Pienta, Rajal B. Shah, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2007) 67 (17): 8229–8239.
https://doi.org/10.1158/0008-5472.CAN-07-1297
Published: 05 September 2007
View article titled, Integrative Analysis of Genomic Aberrations Associated with Prostate Cancer Progression
Open the PDF for Integrative Analysis of Genomic Aberrations Associated with Prostate Cancer Progression in another window
Includes: Supplementary data