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Ru-Fang Yeh
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Journal Articles

Abstract S2-02: The FERGI phase II study of the PI3K inhibitor pictilisib (GDC-0941) plus fulvestrant vs fulvestrant plus placebo in patients with ER+, aromatase inhibitor (AI)-resistant advanced or metastatic breast cancer – Part I results

Ian Krop, Stephen Johnston, Ingrid A Mayer, Maura Dickler, Vinod Ganju, Andres Forero-Torres, Bohuslav Melichar, Serafin Morales, Richard de Boer, Steven Gendreau, Mika Derynck, Mark Lackner, Jill Spoerke, Ru-Fang Yeh, Gallia Levy, Vivian Ng, Carol O'Brien, Heidi Savage, Yuanyuan Xiao, Timothy Wilson, Soo Chin Lee, Katarina Petrakova, Susanne Vallentin, Denise Yardley, Matthew Ellis, Martine Piccart, Edith A Perez, Eric Winer, Peter Schmid
Journal: Cancer Research
Cancer Res (2015) 75 (9_Supplement): S2-02.
https://doi.org/10.1158/1538-7445.SABCS14-S2-02
Published: 01 May 2015
View article titled, Abstract S2-02: The FERGI phase II study of the PI3K inhibitor pictilisib (GDC-0941) plus fulvestrant vs fulvestrant plus placebo in patients with ER+, aromatase inhibitor (AI)-resistant advanced or metastatic breast cancer – Part I results
Journal Articles

Abstract 1385: Molecular changes in breast tumors following bevacizumab-based treatment: Final analysis of a randomized neoadjuvant study of bevacizumab or placebo, followed by chemotherapy with or without bevacizumab, in patients with stage II or III breast cancer

Sara A. Hurvitz, Priti Hegde, Linda Bosserman, Mary Ann Allison, Michael Thirlwell, Ru-Fang Yeh, Ling Fu, Maike Schmidt, Brian Leyland-Jones, Eleonor Quan, David Molthrop, John Barstis, David Park, Maccon Keane, Gargi Upadhyaya, Giribala Patel, Steven Applebaum, Judy Dering, Charles Ginther, Brad Adams, Daniel S. Chen, Dennis J. Slamon
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 1385.
https://doi.org/10.1158/1538-7445.AM2012-1385
Published: 15 April 2012
View article titled, Abstract 1385: Molecular changes in breast tumors following bevacizumab-based treatment: Final analysis of a randomized neoadjuvant study of bevacizumab or placebo, followed by chemotherapy with or without bevacizumab, in patients with stage II or III breast cancer
Journal Articles

Differentiation of Lung Adenocarcinoma, Pleural Mesothelioma, and Nonmalignant Pulmonary Tissues Using DNA Methylation Profiles

Brock C. Christensen, Carmen J. Marsit, E. Andres Houseman, John J. Godleski, Jennifer L. Longacker, Shichun Zheng, Ru-Fang Yeh, Margaret R. Wrensch, Joseph L. Wiemels, Margaret R. Karagas, Raphael Bueno, David J. Sugarbaker, Heather H. Nelson, John K. Wiencke, Karl T. Kelsey
Journal: Cancer Research
Cancer Res (2009) 69 (15): 6315–6321.
https://doi.org/10.1158/0008-5472.CAN-09-1073
Published: 29 July 2009
View article titled, Differentiation of Lung Adenocarcinoma, Pleural Mesothelioma, and Nonmalignant Pulmonary Tissues Using DNA Methylation Profiles
Open the PDF for Differentiation of Lung Adenocarcinoma, Pleural Mesothelioma, and Nonmalignant Pulmonary Tissues Using DNA Methylation Profiles in another window
Includes: Supplementary data
Journal Articles

Abstract #1428: DNA methylation profiles are associated with specific genome-wide copy number alteration profiles in head and neck squamous cell carcinoma

Graham Poage, Brock Christensen, Carmen Marsit, E.Andres Houseman, Margaret Wrensch, Margaret Karagas, Ru-Fang Yeh, Heather Nelson, Joseph Wiemels, Shichun Zheng, Marshall Posner, Michael McClean, John Wiencke, Karl Kelsey
Journal: Cancer Research
Cancer Res (2009) 69 (9_Supplement): 1428.
Published: 01 May 2009
View article titled, Abstract #1428: DNA methylation profiles are associated with specific genome-wide copy number alteration profiles in head and neck squamous cell carcinoma
Journal Articles

Abstract #3017: Environmental exposures and aging are associated with tissue-specific alterations in DNA methylation at cancer-related CpG loci in normal tissues

Brock Christensen, E. Andres Houseman, Carmen Marsit, Shichun Zheng, Margaret Wrensch, Joseph Wiemels, Heather Nelson, Margaret Karagas, Raphael Bueno, David Sugarbaker, Ru-Fang Yeh, John Wiencke, Karl Kelsey
Journal: Cancer Research
Cancer Res (2009) 69 (9_Supplement): 3017.
Published: 01 May 2009
View article titled, Abstract #3017: Environmental exposures and aging are associated with tissue-specific alterations in DNA methylation at cancer-related CpG loci in normal tissues
Journal Articles

Epigenetic Profiles Distinguish Pleural Mesothelioma from Normal Pleura and Predict Lung Asbestos Burden and Clinical Outcome

Brock C. Christensen, E.A. Houseman, John J. Godleski, Carmen J. Marsit, Jennifer L. Longacker, Cora R. Roelofs, Margaret R. Karagas, Margaret R. Wrensch, Ru-Fang Yeh, Heather H. Nelson, Joe L. Wiemels, Shichun Zheng, John K. Wiencke, Raphael Bueno, David J. Sugarbaker, Karl T. Kelsey
Journal: Cancer Research
Cancer Res (2009) 69 (1): 227–234.
https://doi.org/10.1158/0008-5472.CAN-08-2586
Published: 31 December 2008
View article titled, Epigenetic Profiles Distinguish Pleural Mesothelioma from Normal Pleura and Predict Lung Asbestos Burden and Clinical Outcome
Open the PDF for Epigenetic Profiles Distinguish Pleural Mesothelioma from Normal Pleura and Predict Lung Asbestos Burden and Clinical Outcome in another window
Includes: Supplementary data
Journal Articles

Chromosome 12p Deletions in TEL-AML1 Childhood Acute Lymphoblastic Leukemia Are Associated with Retrotransposon Elements and Occur Postnatally

Joseph L. Wiemels, Jerry Hofmann, Michelle Kang, Rebecca Selzer, Roland Green, Mi Zhou, Sheng Zhong, Luoping Zhang, Martyn T. Smith, Carmen Marsit, Mignon Loh, Patricia Buffler, Ru-Fang Yeh
Journal: Cancer Research
Cancer Res (2008) 68 (23): 9935–9944.
https://doi.org/10.1158/0008-5472.CAN-08-2139
Published: 01 December 2008
View article titled, Chromosome 12p Deletions in <em>TEL-AML1</em> Childhood Acute Lymphoblastic Leukemia Are Associated with Retrotransposon Elements and Occur Postnatally
Open the PDF for Chromosome 12p Deletions in <em>TEL-AML1</em> Childhood Acute Lymphoblastic Leukemia Are Associated with Retrotransposon Elements and Occur Postnatally in another window
Includes: Supplementary data
Journal Articles

miR-221/222 modulates estrogen receptor status and signaling in breast cancer

Alex Adai, Mark Lackner, Susanna Stinson, Carol O'Brien, Nancy Yu, Jill Spoerke, Zora Modrusan, Guy Cavet, Frederic de Sauvage, Howard Stern, Lukas Amler, Ru-Fang Yeh, David Dornan
Journal: Cancer Research
Cancer Res (2008) 68 (9_Supplement): LB-285.
Published: 01 May 2008
View article titled, miR-221/222 modulates estrogen receptor status and signaling in breast cancer
Journal Articles

Genome-wide scanning of epigenomic alterations in childhood leukemia

Zhong Sheng, Yuanyuan Xiao, Ru-Fang Yeh, Alexander Tran, Michelle Kang, Jerry Hofmann, Mi Zhou, Christofer Diakos, Shichun Zheng, Margaret Wrensch, Brock Christensen, EA Houseman, Margaret Karagas, Carmen Marsit, Karl Kelsey, Heather Nelson, John Wiencke, Joseph Wiemels
Journal: Cancer Research
Cancer Res (2008) 68 (9_Supplement): 4950.
Published: 01 May 2008
View article titled, Genome-wide scanning of epigenomic alterations in childhood leukemia
Journal Articles

Methylation profiling of tumor and peripheral blood DNA in malignant pleural mesothelioma patients

Brock Christensen, E. Andres Houseman, Ru-Fang Yeh, John Godleski, Raphael Bueno, David Sugarbaker, Margaret Karagas, Margaret Wrensch, Joseph Wiemels, Shichun Zheng, Carmen Marsit, Heather Nelson, John Wiencke, Karl Kelsey
Journal: Cancer Research
Cancer Res (2008) 68 (9_Supplement): 54.
Published: 01 May 2008
View article titled, Methylation profiling of tumor and peripheral blood DNA in malignant pleural mesothelioma patients
Journal Articles

E2a-Pbx1 direct targets and secondary mutations in leukemogenesis

Christofer Diakos, Yuanyuan Xiao, Jerry Hofmann, Shichun Zheng, Michelle Kang, Mi Zhou, Sheng Zhong, John Wiencke, Ru-Fang Yeh, Joseph Wiemels
Journal: Cancer Research
Cancer Res (2008) 68 (9_Supplement): 4396.
Published: 01 May 2008
View article titled, E2a-Pbx1 direct targets and secondary mutations in leukemogenesis
Journal Articles

Timing and formation of chromosome 12p deletions in TEL-AML1 childhood acute lymphoblastic leukemia

Joseph Wiemels, Jerry Hofmann, Michelle Kang, Rebecca Selzer, Roland Green, Luoping Zhang, Martyn Smith, Patricia Buffler, Ru-Fang Yeh
Journal: Cancer Research
Cancer Res (2008) 68 (9_Supplement): 1627.
Published: 01 May 2008
View article titled, Timing and formation of chromosome 12p deletions in TEL-AML1 childhood acute lymphoblastic leukemia
Journal Articles

Methylation profiling with the Illumina cancer panel distinguishes glioma subtypes

John Wiencke, Shichun Zheng, E. Andres Houseman, Daphne Haas Kogan, Sean McBride, Ru-Fang Yeh, Margaret Wrensch, Joseph Wiemels, Heather Nelson, Brock Christensen, Margaret Karagas, Karl Kelsey, Carmen Marsit, Mitchel Berger
Journal: Cancer Research
Cancer Res (2008) 68 (9_Supplement): 35.
Published: 01 May 2008
View article titled, Methylation profiling with the Illumina cancer panel distinguishes glioma subtypes
Journal Articles

Predictive identification of disregulated microRNA modules from genomewide mRNA and aCGH experiments in glioblastoma multiforme

Ru-Fang Yeh, Alex Adai, Colin Morrow, Graeme Hodgson, Burt Feuerstein
Journal: Cancer Research
Cancer Res (2007) 67 (9_Supplement): 2969.
Published: 01 May 2007
View article titled, Predictive identification of disregulated microRNA modules from genomewide mRNA and aCGH experiments in glioblastoma multiforme
Journal Articles

Histone 3 lysine 9 trimethylation marks transcriptionally active chromatin

John Wiencke, Shichun Zheng, Zachary Morrison, Ru-Fang Yeh
Journal: Cancer Research
Cancer Res (2007) 67 (9_Supplement): 2445.
Published: 01 May 2007
View article titled, Histone 3 lysine 9 trimethylation marks transcriptionally active chromatin
Journal Articles

Identifying candidate single nucleotide polymorphisms potentially associated with glioblastoma multiforme susceptibility using random forests

Jeffrey Chang, Ru-Fang Yeh, Tarik Tihan, John Wiencke, Joseph Wiemels, Ivan Smirnov, Alexander Pico, Hywel Jones, Margaret Wrensch
Journal: Cancer Research
Cancer Res (2007) 67 (9_Supplement): 45.
Published: 01 May 2007
View article titled, Identifying candidate single nucleotide polymorphisms potentially associated with glioblastoma multiforme susceptibility using random forests
Journal Articles

Loss at Chromosome 13q22.2 Indicates Poor Survival in a Group of Grade 2 and Grade 3 Astrocytomas

Anjan Misra, Ivan Smirnov, Scott Vandenberg, Marcus Ware, Chibo Hong, Yuichi Hirose, Sameer Kharbanda, Janice Nigro, Edward Pan, Lars Prestegarden, Ru-Fang Yeh, Joseph Costello, Allan Yates, Berndt Scheithauer, Peter Burger, Catarina Giannini, Heidi Phillips, Ken Aldape, Burt G. Feuerstein
Journal: Cancer Research
Cancer Res (2006) 66 (8_Supplement): 989.
Published: 15 April 2006
View article titled, Loss at Chromosome 13q22.2 Indicates Poor Survival in a Group of Grade 2 and Grade 3 Astrocytomas
Journal Articles

Meta-analysis of gene expression profiling data from glioblastoma tumor samples identifies a robust multigene classifier predictive of survival.

Howard Colman, Li Zhang, Heidi S. Phillips, Caimiao Wei, Catherine L. Nutt, David N. Louis, Gregory J. Cairncross, Burt G. Feuerstein, Ru-Fang Yeh, Robert B. Jenkins, Ken D. Aldape
Journal: Cancer Research
Cancer Res (2006) 66 (8_Supplement): 1337–1338.
Published: 15 April 2006
View article titled, Meta-analysis of gene expression profiling data from glioblastoma tumor samples identifies a robust multigene classifier predictive of survival.
Journal Articles

Cloning and characterization of chromosome 12p deletions in childhood acute lymphoblastic leukemia using sub-kilobase resolution focused tiling aCGH

Joseph L. Wiemels, Rebecca Selzer, Todd Richmond, Roland Green, Martyn T. Smith, Patricia Buffler, Ru-Fang Yeh
Journal: Cancer Research
Cancer Res (2005) 65 (9_Supplement): 1059.
Published: 01 May 2005
View article titled, Cloning and characterization of chromosome 12p deletions in childhood acute lymphoblastic leukemia using sub-kilobase resolution focused tiling aCGH