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Journal Articles

Single-Cell Analysis Identifies NOTCH3-Mediated Interactions between Stromal Cells That Promote Microenvironment Remodeling and Invasion in Lung Adenocarcinoma

Handan Xiang, Yidan Pan, Marc A. Sze, Marta Wlodarska, Ling Li, Karyn Ann van de Mark, Haleema Qamar, Casey J. Moure, Douglas E. Linn, Josephine Hai, Ying Huo, James Clarke, Tze Guan Tan, Samantha Ho, Karen W. Teng, Muhammad N. Ramli, Michael Nebozhyn, Chunsheng Zhang, Julianne Barlow, Corinne E. Gustafson, Savanna Gornisiewicz, Thomas P. Albertson, Stephanie L. Korle, Raphael Bueno, Lily Y. Moy, Elisabeth H. Vollmann, Derek Y. Chiang, Philip E. Brandish, Andrey Loboda
Journal: Cancer Research
Cancer Res (2024) 84 (9): 1410–1425.
https://doi.org/10.1158/0008-5472.CAN-23-1183
Published: 02 May 2024
View article titled, Single-Cell Analysis Identifies NOTCH3-Mediated Interactions between Stromal Cells That Promote Microenvironment Remodeling and Invasion in Lung Adenocarcinoma
Open the PDF for Single-Cell Analysis Identifies NOTCH3-Mediated Interactions between Stromal Cells That Promote Microenvironment Remodeling and Invasion in Lung Adenocarcinoma in another window
Includes: Supplementary data
Journal Articles

Abstract 6733: Multiomics analysis of impact of CD8+ and other cell populations in STING agonist treated ex vivo mesothelioma samples

Elena Ivanova, Sung R. Park, Ari P. Zlota, Nathaniel Spicer, Minh Ha, Sophie Kivlehan, Iliana Gjeci, Simona Innocenti, Lauren Zasadil, Patrick Lizotte, Michael Y. Tolstorukov, Kai Ding, Adnan O. Abu-Yousif, Jeffrey Raizer, Vicky A. Appleman, Raphael Bueno, David A. Barbie, Cloud P. Paweletz
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 6733.
https://doi.org/10.1158/1538-7445.AM2024-6733
Published: 22 March 2024
View article titled, Abstract 6733: Multiomics analysis of impact of CD8+ and other cell populations in STING agonist treated <em>ex vivo</em> mesothelioma samples
Journal Articles

Abstract 5086: Functional profiling in lung tumor explants show contributions of the tumor microenvironment to response of Dato-DXdex vivo

Satoru Yasuda, Elena Ivanova, Ha V. Vo, Sophie Kivlehan, Iliana Gjeci, Minh Ha, Patrick Lizotte, Raphael Bueno, David A. Barbie, Cloud P. Paweletz
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 5086.
https://doi.org/10.1158/1538-7445.AM2024-5086
Published: 22 March 2024
View article titled, Abstract 5086: Functional profiling in lung tumor explants show contributions of the tumor microenvironment to response of Dato-DXd<em>ex vivo</em>
Journal Articles

Abstract 5235: Combination STING agonist and NK cellular therapy in patient derived organotypic tumor spheroids

Patrick H. Lizotte, Elena Ivanova, Sung Park, Nathaniel Spicer, Sophie Kivlehan, Iliana Gjeci, Stefan Kiesgen, Vicky Appleman, LeeAnn Talarico, Michael Y. Tolstorukov, Raphael Bueno, David A. Barbie, Cloud P. Paweletz
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 5235.
https://doi.org/10.1158/1538-7445.AM2024-5235
Published: 22 March 2024
View article titled, Abstract 5235: Combination STING agonist and NK cellular therapy in patient derived organotypic tumor spheroids
Journal Articles

Abstract 95: Uncommitted cells and phenotypic plasticity elucidate the complexity of the epithelial-mesenchymal molecular gradient of pleural mesothelioma

David T. Severson, Samuel Freyaldenhoven, Benjamin Wadowski, Travis Hughes, Yin P. Hung, Roderick V. Jensen, William G. Richards, Corinne E. Gustafson, Kimberly Vermilya, Simona Innocenti, Julianne S. Barlow, Matthew B. Cougar, Jamie Anderson, Vivian Wang, Mary N. Dao, Alex K. Shalek, Assunta De Rienzo, Raphael Bueno
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 95.
https://doi.org/10.1158/1538-7445.AM2023-95
Published: 04 April 2023
View article titled, Abstract 95: Uncommitted cells and phenotypic plasticity elucidate the complexity of the epithelial-mesenchymal molecular gradient of pleural mesothelioma
Journal Articles

Abstract 3691: Dynamic BH3 profiling identifies novel combinations in malignant pleural mesothelioma with in vivo efficacy

Danielle S. Potter, Ruochen Du, Kin-Hoe Chow, Keith L. Ligon, Raphael Bueno, Anthony Letai
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 3691.
https://doi.org/10.1158/1538-7445.AM2022-3691
Published: 15 June 2022
View article titled, Abstract 3691: Dynamic BH3 profiling identifies novel combinations in malignant pleural mesothelioma with <em>in vivo</em> efficacy
Journal Articles

Abstract 4168: Tumor cell stimulator of interferon genes (STING) activation primes NK cell therapy in mesothelioma

Erik H. Knelson, Elena Ivanova, Mubin Tarannum, Marco Campisi, Patrick H. Lizotte, Matthew A. Booker, Brittany Meisenheimer, Minyue Chen, Nathaniel Spicer, Bonje Obua, Ha V. Vo, Thomas P. Albertson, Marina Vivero, Michael Y. Tolstorukov, Rizwan Romee, Cloud P. Paweletz, Raphael Bueno, David A. Barbie
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 4168.
https://doi.org/10.1158/1538-7445.AM2022-4168
Published: 15 June 2022
View article titled, Abstract 4168: Tumor cell stimulator of interferon genes (STING) activation primes NK cell therapy in mesothelioma
Journal Articles

Abstract 4550: Correlations between tumor mutation burden, inflammatory profile and histological characteristics of tumor microenvironment in early-stage squamous cell lung carcinoma

Hui Yu, Daniel T. Merrick, Ming-Sound Tsao, William G. Richards, Lucian R. Chirieac, Mark A. Watson, Christopher J. Rivard, David H. Harpole, Raphael Bueno, Adrie van Bokhoven, Aik-Choon Tan, Fred R. Hirsch, Wilbur A. Franklin
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 4550.
https://doi.org/10.1158/1538-7445.AM2019-4550
Published: 01 July 2019
View article titled, Abstract 4550: Correlations between tumor mutation burden, inflammatory profile and histological characteristics of tumor microenvironment in early-stage squamous cell lung carcinoma
Journal Articles

Abstract 5722: Antigen identification for cancer immunotherapy by deep learning on tumor HLA peptides

Brendan Bulik-Sullivan, Jennifer Busby, Matthew Davis, Lauren Young, Tyler Murphy, Andrew Clark, Fujiko Duke, Michele Busby, Adnan Derti, Mojca Skoberne, Karin Jooss, Corinne E. Gustafson, Assunta De Rienzo, William G. Richards, Nhien T. Dao, Hyeong R. Kim, Jamie E. Anderson, Chang-Min Choi, Vincent De Montpreville, Se Jin Jang, Olaf Mercier, Raphael Bueno, Elie Fadel, Joshua Francis, Roman Yelensky
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 5722.
https://doi.org/10.1158/1538-7445.AM2018-5722
Published: 01 July 2018
View article titled, Abstract 5722: Antigen identification for cancer immunotherapy by deep learning on tumor HLA peptides
Journal Articles

Abstract 5864: Novel anti-BMI-1 therapy in non-small cell lung cancer

Indira Krishnan, Giorgia Maroni, Sean Clohessy, Virginia Savova, Mahmoud Bassal, Rapolas Zilionis, Eva Csizmadia, Clara M. Kerwin, Sun Choi, Claire V. Meyerovitz, Nicole Pandell, Chee W. Fhu, Junyan Zhang, Daniela S. Basseres, Cristina M. Magli, Julian Goggi, Robert S. Welner, Allon M. Klein, Marla Weetall, Art Branstrom, Raphael Bueno, Azhar Ali, Daniel G. Tenen, Elena Levantini
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 5864.
https://doi.org/10.1158/1538-7445.AM2018-5864
Published: 01 July 2018
View article titled, Abstract 5864: Novel anti-BMI-1 therapy in non-small cell lung cancer
Journal Articles

Abstract 5025: From OR to bench: Identification of variables affecting success in generating patient derived organotypic spheroids (pDOTS)

Dalia Larios, Amir Aref, Elena Ivanova, Brandon Piel, Andrew Portell, David A. Barbie, Raphael Bueno, Cloud Paweletz
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 5025.
https://doi.org/10.1158/1538-7445.AM2018-5025
Published: 01 July 2018
View article titled, Abstract 5025: From OR to bench: Identification of variables affecting success in generating patient derived organotypic spheroids (pDOTS)
Journal Articles

Abstract LB-331: Comprehensive genomic analysis of malignant pleural mesothelioma identifies recurrent mutations, gene fusions and splicing alterations

Somasekar Seshagiri, Eric Stawiski, Leonard Goldstein, Steffen Durinck, Zora Modrusan, Florian Gnad, Thong T. Nguyen, Bijay Jaiswal, Assunta De Rienzo, William Richards, Raphael Bueno
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): LB-331.
https://doi.org/10.1158/1538-7445.AM2016-LB-331
Published: 15 July 2016
View article titled, Abstract LB-331: Comprehensive genomic analysis of malignant pleural mesothelioma identifies recurrent mutations, gene fusions and splicing alterations
Journal Articles

Gender-Specific Molecular and Clinical Features Underlie Malignant Pleural Mesothelioma

Assunta De Rienzo, Michael A. Archer, Beow Y. Yeap, Nhien Dao, Daniele Sciaranghella, Antonios C. Sideris, Yifan Zheng, Alexander G. Holman, Yaoyu E. Wang, Paola S. Dal Cin, Jonathan A. Fletcher, Renee Rubio, Larry Croft, John Quackenbush, Peter E. Sugarbaker, Kiara J. Munir, Jesse R. Battilana, Corinne E. Gustafson, Lucian R. Chirieac, Soo Meng Ching, James Wong, Liang Chung Tay, Stephen Rudd, Robert Hercus, David J. Sugarbaker, William G. Richards, Raphael Bueno
Journal: Cancer Research
Cancer Res (2016) 76 (2): 319–328.
https://doi.org/10.1158/0008-5472.CAN-15-0751
Published: 14 January 2016
View article titled, Gender-Specific Molecular and Clinical Features Underlie Malignant Pleural Mesothelioma
Open the PDF for Gender-Specific Molecular and Clinical Features Underlie Malignant Pleural Mesothelioma in another window
Includes: Supplementary data
Journal Articles

Abstract 4236: FAK inhibitor VS-6063 (defactinib) targets mesothelioma cancer stem cells, which are enriched by standard of care chemotherapy

Jonathan A. Pachter, Vihren N. Kolev, Laurel Schunselaar, Irina M. Shapiro, Raphael Bueno, Paul Baas, Qunli Xu, David T. Weaver
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 4236.
https://doi.org/10.1158/1538-7445.AM2015-4236
Published: 01 August 2015
View article titled, Abstract 4236: FAK inhibitor VS-6063 (defactinib) targets mesothelioma cancer stem cells, which are enriched by standard of care chemotherapy
Journal Articles

Abstract 4723: Macrophages foster neoplastic progression of malignant mesothelioma and limit response to chemotherapy.

Collin Blakely, Tina Bose, Melissa Wheeler, Raphael Bueno, David Sugarbaker, David Jablons, V. Courtney Broaddus, Lisa Coussens
Journal: Cancer Research
Cancer Res (2013) 73 (8_Supplement): 4723.
https://doi.org/10.1158/1538-7445.AM2013-4723
Published: 15 April 2013
View article titled, Abstract 4723: Macrophages foster neoplastic progression of malignant mesothelioma and limit response to chemotherapy.
Journal Articles

Abstract 5257: Manipulating the Noxa/Bim axis undermines the multicellular resistance of 3D tumor spheroids

Dario Barbone, Priscilla Cheung, Tsung-Ming Yang, David M. Jablons, David J. Sugarbaker, Raphael Bueno, Dean A. Fennell, Anthony G. Letai, Courtney V. Broaddus
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 5257.
https://doi.org/10.1158/1538-7445.AM2012-5257
Published: 15 April 2012
View article titled, Abstract 5257: Manipulating the Noxa/Bim axis undermines the multicellular resistance of 3D tumor spheroids
Journal Articles

Abstract LB-251: Manipulation of macrophage phenotype enhances the apoptotic response to chemotherapy in mesothelioma

V. Courtney Broaddus, Sailaja Battula, Dario Barbone, Collin Blakely, David J. Sugarbaker, Raphael Bueno, Lisa M. Coussens
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): LB-251.
https://doi.org/10.1158/1538-7445.AM2012-LB-251
Published: 15 April 2012
View article titled, Abstract LB-251: Manipulation of macrophage phenotype enhances the apoptotic response to chemotherapy in mesothelioma
Journal Articles

Abstract 454: Targeting macrophages in a preclinical model of malignant mesothelioma

Collin M. Blakely, Nikita Kolhatkar, Magnus Johansson, Adam Beltran, Dario Barbone, Raphael Bueno, David Sugarbaker, Thierry Jahan, David Jablons, V. Courtney Broaddus, Lisa M. Coussens
Journal: Cancer Research
Cancer Res (2011) 71 (8_Supplement): 454.
https://doi.org/10.1158/1538-7445.AM2011-454
Published: 15 April 2011
View article titled, Abstract 454: Targeting macrophages in a preclinical model of malignant mesothelioma
Journal Articles

Integrated Profiling Reveals a Global Correlation between Epigenetic and Genetic Alterations in Mesothelioma

Brock C. Christensen, E. Andres Houseman, Graham M. Poage, John J. Godleski, Raphael Bueno, David J. Sugarbaker, John K. Wiencke, Heather H. Nelson, Carmen J. Marsit, Karl T. Kelsey
Journal: Cancer Research
Cancer Res (2010) 70 (14): 5686–5694.
https://doi.org/10.1158/0008-5472.CAN-10-0190
Published: 14 July 2010
View article titled, Integrated Profiling Reveals a Global Correlation between Epigenetic and Genetic Alterations in Mesothelioma
Open the PDF for Integrated Profiling Reveals a Global Correlation between Epigenetic and Genetic Alterations in Mesothelioma in another window
Includes: Supplementary data
Journal Articles

Abstract 3844: Targeting macrophages as a novel therapeutic approach for malignant pleural mesothelioma

Nikita S. Kolhatkar, Magnus Johansson, Dario Barbone, Adam Yagui-Beltran, Raphael Bueno, David J. Sugarbaker, David M. Jablons, V. Courtney Broaddus, Lisa M. Coussens
Journal: Cancer Research
Cancer Res (2010) 70 (8_Supplement): 3844.
https://doi.org/10.1158/1538-7445.AM10-3844
Published: 15 April 2010
View article titled, Abstract 3844: Targeting macrophages as a novel therapeutic approach for malignant pleural mesothelioma