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Journal Articles

Abstract 5443: Pathomics reveals the molecular and immune evolution from lung preneoplasia to invasive adenocarcinoma

Pingjun Chen, Frank Rojas, Xin Hu, Junya Fujimoto, Alejandra Serrano, Bo Zhu, Lingzhi Hong, Rukhmini Bandyopadhyay, Muhammad Aminu, Maliazurina B. Saad, Morteza Salehjahromi, Sheeba J. Sujit, Neda Kalhor, Harvey I. Pass, Andre L. Moreira, Ignacio I. Wistuba, Don L. Gibbons, John V. Heymach, Luisa M. Solis Soto, Jianjun Zhang, Jia Wu
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 5443.
https://doi.org/10.1158/1538-7445.AM2023-5443
Published: 04 April 2023
View article titled, Abstract 5443: Pathomics reveals the molecular and immune evolution from lung preneoplasia to invasive adenocarcinoma
Journal Articles

Abstract 3260: Enhanced lineage plasticity in RTK-independent TKI-resistant EGFR-mutant NSCLC

Xiuning Le, Ruiping Wang, Natalie Vokes, Yasir Elamin, Neda Kalhor, Daniel McGrail, Yuanxin Xi, Santiago Treviño III, Lingzhi Hong, Robyn Du, George Blumenschein, Carl Gay, Marcelo Negrao, Mehmet Altan, Hai Tran, Limei Hu, Jing Wang, Simon Heeke, Monique Nilsson, Jacqulyne Robichaux, Minghao Dang, Guangchun Han, Lauren Byers, Anne Tsao, Boris Sepesi, Chantale Bernatchez, Jianjun Zhang, Linghua Wang, John Heymach
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 3260.
https://doi.org/10.1158/1538-7445.AM2022-3260
Published: 15 June 2022
View article titled, Abstract 3260: Enhanced lineage plasticity in RTK-independent TKI-resistant EGFR-mutant NSCLC
Journal Articles

Abstract 5305: Delta-like ligand 3 immunohistochemical expression landscape in high-grade lung neuroendocrine tumors

Cibelle F. Lima, Pedro S. Rocha, Junya Fujimoto, Allison Stewart, Robert Cardnell, Wei Lu, Khaja Khan, Beate Sable, Aaron R. Ellison, Ignacio I. Wistuba, Carl M. Gay, Neda Kalhor, Lauren A. Byers, Luisa M. Solis-Soto
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 5305.
https://doi.org/10.1158/1538-7445.AM2022-5305
Published: 15 June 2022
View article titled, Abstract 5305: Delta-like ligand 3 immunohistochemical expression landscape in high-grade lung neuroendocrine tumors
Journal Articles

Abstract 399: Tertiary lymphoid structures features associate with outcome in non-small cell lung carcinoma

Rossana Natalia Lazcano Segura, Andre Catao, Luisa M. Solis, Mei Jiang, Auriole Tamegnon, Junya Fujimoto, Jaime Rodriguez-Canales, Chi-Wan B. Chow, Carmen Behrens, Neda Kalhor, Annika Weissferdt, John Heymach, Stephen Swisher, Boris Sepesi, Jack Lee, Cesar Moran, Andrew Futreal, Jianjun Zhang, Edwin R. Parra, Ignacio I. Wistuba, Michael T. Tetzlaff, Alejandro Francisco-Cruz
Journal: Cancer Research
Cancer Res (2020) 80 (16_Supplement): 399.
https://doi.org/10.1158/1538-7445.AM2020-399
Published: 15 August 2020
View article titled, Abstract 399: Tertiary lymphoid structures features associate with outcome in non-small cell lung carcinoma
Journal Articles

Abstract 2899: Single-cell analyses reveal increasing intratumoral heterogeneity as an essential component of treatment resistance in small cell lung cancer

C. Allison Stewart, Carl M. Gay, Yuanxin Xi, Junya Fujimoto, Neda Kalhor, Patrice M. Hartsfield, Hai Tran, Luisa Fernandez, David Lu, Yipeng Wang, Ryan Dittamore, Jianjun Zhang, Stephen G. Swisher, Jack A. Roth, Trudy G. Oliver, John V. Heymach, Ignacio I. Wistuba, Bonnie S. Glisson, Paul Robson, Jing Wang, Lauren A. Byers
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 2899.
https://doi.org/10.1158/1538-7445.AM2019-2899
Published: 01 July 2019
View article titled, Abstract 2899: Single-cell analyses reveal increasing intratumoral heterogeneity as an essential component of treatment resistance in small cell lung cancer
Journal Articles

Abstract 1180: Impact of the spatial analysis of tumor-associated lymphocytes and tumor-associated macrophages on recurrence at early stage of non-small cell lung carcinoma

Alejandro Francisco-Cruz, Edwin R. Parra, Santhoshi N. Krishnan, Souptik Barua, Mei Jiang, Junya Fujimoto, Christine B. Peterson, Priyam Das, Chi-Wan Chow, Jaime Rodriguez-Canales, Carmen Behrens, Neda Kalhor, Annikka Weissferdt, John Heymach, Stephen Swisher, Boris Sepesi, Arvind Rao, J. Jack Lee, Cesar Moran, Andrew Futreal, Jianjun Zhang, Ignacio I. Wistuba
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 1180.
https://doi.org/10.1158/1538-7445.AM2019-1180
Published: 01 July 2019
View article titled, Abstract 1180: Impact of the spatial analysis of tumor-associated lymphocytes and tumor-associated macrophages on recurrence at early stage of non-small cell lung carcinoma
Journal Articles

Abstract 1174: Characterization of the immunologic intra-tumor heterogeneity in early stages of non-small cell lung carcinoma using multiplex immunofluorescence and image analysis approaches

Alejandro Francisco Cruz, Edwin R. Parra, Mei Jiang, Junya Fujimoto, Chi-Wan Chow, Jaime Rodriguez-Canales, Carmen Behrens, Neda Kalhor, Annikka Weissferdt, John Heymach, Stephen Swisher, Boris Sepesi, J. Jack Lee, Cesar Moran, P. Andrew Futreal, Jianjun Zhang, Ignacio I. Wistuba
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 1174.
https://doi.org/10.1158/1538-7445.AM2018-1174
Published: 01 July 2018
View article titled, Abstract 1174: Characterization of the immunologic intra-tumor heterogeneity in early stages of non-small cell lung carcinoma using multiplex immunofluorescence and image analysis approaches
Journal Articles

Abstract 990: Single-cell profiling of small cell lung cancer circulating tumor cell-derived xenograft models reveals intratumoral heterogeneity among mediators of chemoresistance

C. Allison Stewart, Carl M. Gay, Yuanxin Xi, Siva V., Junya Fujimoto, Pan Tong, Lixia Diao, Lerong Li, Mohan Bolisetty, Neda Kalhor, Patrice Lawson, Mayra Vasquez, Hai Tran, Ignacio I. Wistuba, Bonnie Glisson, Jianjun Zhang, Stephen G. Swisher, Jack A. Roth, John V. Heymach, Paul Robson, Jing Wang, Lauren A. Byers
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 990.
https://doi.org/10.1158/1538-7445.AM2018-990
Published: 01 July 2018
View article titled, Abstract 990: Single-cell profiling of small cell lung cancer circulating tumor cell-derived xenograft models reveals intratumoral heterogeneity among mediators of chemoresistance
Journal Articles

Abstract 3997: Somatic mutational processes in the cancerization field of the normal-appearing airway reveal early drivers in the development of non-small cell lung cancer

Smruthy Sivakumar, Yasminka Jakubek, F Anthony San Lucas, Wenhua Lang, Christina McDowell, Zachary Weber, Carmen Behrens, Neda Kalhor, Cesar Moran, Randa El-Zein, Gareth Davies, Junya Fujimoto, Reza Mehran, Stephen G. Swisher, Jing Wang, Jerry Fowler, Steven Dubinett, Avrum E. Spira, Erik Ehli, Ignacio I. Wistuba, Paul Scheet, Humam Kadara
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 3997.
https://doi.org/10.1158/1538-7445.AM2018-3997
Published: 01 July 2018
View article titled, Abstract 3997: Somatic mutational processes in the cancerization field of the normal-appearing airway reveal early drivers in the development of non-small cell lung cancer
Journal Articles

Abstract 1434: Mutational landscape in the normal-appearing airway cancerization field of early-stage non-small cell lung cancer

Smruthy Sivakumar, Yasminka Jakubek, Wenhua Lang, Tina McDowell, Melinda M. Garcia, Chi-Wan Chow, Zachary Weber, Carmen Behrens, Neda Kalhor, Cesar Moran, Randa El-Zein, Gareth Davies, Junya Fujimoto, Reza Mehran, Stephen G. Swisher, Jing Wang, Avrum E. Spira, Jerry Fowler, F Anthony San Lucas, Ignacio I. Wistuba, Erik Ehli, Paul Scheet, Humam Kadara
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 1434.
https://doi.org/10.1158/1538-7445.AM2017-1434
Published: 01 July 2017
View article titled, Abstract 1434: Mutational landscape in the normal-appearing airway cancerization field of early-stage non-small cell lung cancer
Journal Articles

Abstract 2934: Neoadjuvant chemotherapy influence changes of the immune response in non-small cell lung carcinomas immune response in non-small cell lung carcinomas

Edwin Roger Cuentas, Carmen Behrens, Jaime Rodriguez-Canales, Mei Jiang, Apar Pataer, Arelene Correa, Stephen Swisher, Boris Sepesi, Annikka Weissferdt, Neda Kalhor, Jiexin Zhang, Jack Lee, John Heymach, Cesar Moran, Jianjun Zhang, Don Gibbons, Ignacio Wistuba
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 2934.
https://doi.org/10.1158/1538-7445.AM2017-2934
Published: 01 July 2017
View article titled, Abstract 2934: Neoadjuvant chemotherapy influence changes of the immune response in non-small cell lung carcinomas immune response in non-small cell lung carcinomas
Journal Articles

Abstract 1144: Detection of a novel ALK fusion variant in lung adenocarcinoma using a comprehensive genomic analysis

Kazuhiko Shien, Dennis Ruder, Ecaterina E. Ileana, Vassiliki A. Papadimitrakopoulou, Garrett M. Frampton, Carmen Behrens, Neda Kalhor, J. Jack Lee, Ximing Tang, Roy S. Herbst, Ignacio I. Wistuba, Julie G. Izzo
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 1144.
https://doi.org/10.1158/1538-7445.AM2016-1144
Published: 15 July 2016
View article titled, Abstract 1144: Detection of a novel ALK fusion variant in lung adenocarcinoma using a comprehensive genomic analysis
Journal Articles

Abstract 142: Mutation and immune profiles in early-stage lung squamous cell carcinoma

Murim Choi, Humam Kadara, Jiexin Zhang, Edwin Parra Cuentas, Jaime Rodriguez Canales, Stephen G. Gaffney, Zi-Ming Zhao, Carmen Behrens, Junya Fujimoto, Chi-Wan Chow, Neda Kalhor, Cesar Moran, David Rimm, Stephen Swisher, Don L. Gibbons, John V. Heymach, Edward Kaftan, Jeffrey Townsend, Thomas J. Lynch, Joseph Schlessinger, J. Jack Lee, Richard Lifton, Roy S. Herbst, Ignacio I. Wistuba
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 142.
https://doi.org/10.1158/1538-7445.AM2016-142
Published: 15 July 2016
View article titled, Abstract 142: Mutation and immune profiles in early-stage lung squamous cell carcinoma
Journal Articles

Abstract 89: Whole-exome sequencing and immune profiling of early-stage lung adenocarcinoma

Humam Kadara, Murim Choi, Jiexin Zhang, Edwin Parra Cuentas, Jaime Rodriguez Canales, Stephen Gaffney, Zi-Ming Zhao, Carmen Behrens, Junya Fujimoto, Chi-Wan Chow, Neda Kalhor, Cesar Moran, David Rimm, Stephen G. Swisher, Don L. Gibbons, John V. Heymach, Edward Kaftan, Jeffrey Townsend, Thomas J. Lynch, Joseph Schlessinger, J. Jack Lee, Richard Lifton, Ignacio I. Wistuba, Roy S. Herbst
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 89.
https://doi.org/10.1158/1538-7445.AM2016-89
Published: 15 July 2016
View article titled, Abstract 89: Whole-exome sequencing and immune profiling of early-stage lung adenocarcinoma
Journal Articles

Genomic Landscape Established by Allelic Imbalance in the Cancerization Field of a Normal Appearing Airway

Yasminka Jakubek, Wenhua Lang, Selina Vattathil, Melinda Garcia, Li Xu, Lili Huang, Suk-Young Yoo, Li Shen, Wei Lu, Chi-Wan Chow, Zachary Weber, Gareth Davies, Jing Huang, Carmen Behrens, Neda Kalhor, Cesar Moran, Junya Fujimoto, Reza Mehran, Randa El-Zein, Stephen G. Swisher, Jing Wang, Jerry Fowler, Avrum E. Spira, Erik A. Ehli, Ignacio I. Wistuba, Paul Scheet, Humam Kadara
Journal: Cancer Research
Cancer Res (2016) 76 (13): 3676–3683.
https://doi.org/10.1158/0008-5472.CAN-15-3064
Published: 30 June 2016
View article titled, Genomic Landscape Established by Allelic Imbalance in the Cancerization Field of a Normal Appearing Airway
Open the PDF for Genomic Landscape Established by Allelic Imbalance in the Cancerization Field of a Normal Appearing Airway in another window
Includes: Supplementary data
Journal Articles

Modulation of EZH2 Expression by MEK-ERK or PI3K-AKT Signaling in Lung Cancer Is Dictated by Different KRAS Oncogene Mutations

Erick Riquelme, Carmen Behrens, Heather Y. Lin, George Simon, Vassiliki Papadimitrakopoulou, Julie Izzo, Cesar Moran, Neda Kalhor, J. Jack Lee, John D. Minna, Ignacio I. Wistuba
Journal: Cancer Research
Cancer Res (2016) 76 (3): 675–685.
https://doi.org/10.1158/0008-5472.CAN-15-1141
Published: 31 January 2016
View article titled, Modulation of EZH2 Expression by MEK-ERK or PI3K-AKT Signaling in Lung Cancer Is Dictated by Different KRAS Oncogene Mutations
Open the PDF for Modulation of EZH2 Expression by MEK-ERK or PI3K-AKT Signaling in Lung Cancer Is Dictated by Different KRAS Oncogene Mutations in another window
Includes: Supplementary data
Journal Articles

Abstract 745: Oncostatin M receptor activation leads to molecular targeted therapy resistance in non-small cell lung cancer

Kazuhiko Shien, Vassiliki A. Papadimitrakopoulou, Dennis Ruder, Nana E. Hanson, Neda Kalhor, J. Jack Lee, Waun Ki Hong, Ximing Tang, Roy S. Herbst, Luc Girard, John D. Minna, Jonathan M. Kurie, Ignacio I. Wistuba, Julie G. Izzo
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 745.
https://doi.org/10.1158/1538-7445.AM2015-745
Published: 01 August 2015
View article titled, Abstract 745: Oncostatin M receptor activation leads to molecular targeted therapy resistance in non-small cell lung cancer
Journal Articles

Abstract 2993: The landscape of DNA allelic imbalance in the normal-appearing airway field of cancerization

Yasminka Jakubek, Wenhua Lang, Selina Vattathil, Melinda Garcia, Lili Huang, Wei Lu, Chi-Wan Chow, Zachary Weber, Gareth E. Davies, Carmen Behrens, Neda Kalhor, Cesar Moran, Junya Fujimoto, Reza J. Mehran, Jerry Fowler, Erik A. Ehli, Ignacio I. Wistuba, Paul Scheet, Humam Kadara
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 2993.
https://doi.org/10.1158/1538-7445.AM2015-2993
Published: 01 August 2015
View article titled, Abstract 2993: The landscape of DNA allelic imbalance in the normal-appearing airway field of cancerization
Journal Articles

Abstract 3576: Rictor alterations elicit non-canonical signaling mechanisms contributing to tumorigenicity and therapeutic resistance in non-small cell lung cancer (NSCLC)

Dennis Ruder, Vassiliki Papadimitrakopoulou, Kazuhiko Shien, Neda Kalhor, J. Jack Lee, Waun K. Hong, Ximing Tang, Luc Girard, John D. Minna, Lixia Diao, Jing Wang, Nana E. Hanson, James Sun, Vincent Miller, Garrett Frampton, Roy S. Herbst, Ignacio I. Wistuba, Julie G. Izzo
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 3576.
https://doi.org/10.1158/1538-7445.AM2015-3576
Published: 01 August 2015
View article titled, Abstract 3576: Rictor alterations elicit non-canonical signaling mechanisms contributing to tumorigenicity and therapeutic resistance in non-small cell lung cancer (NSCLC)
Journal Articles

Abstract 3623: Neoadjuvant chemotherapy is associated with increased expression of DNA repair proteins and epithelial to mesenchymal transition (EMT) in patients with non-small cell lung cancer (NSCLC)

Daniel R. Gomez, Lixia Diao, Jing Wang, Ignacio I. Wistuba, Cesar Moran, Neda Kalhor, Milind B. Suraokar, Stephen G. Swisher, Carmen Behrens, Youhong Fan, John V. Heymach, Lauren A. Byers
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 3623.
https://doi.org/10.1158/1538-7445.AM2015-3623
Published: 01 August 2015
View article titled, Abstract 3623: Neoadjuvant chemotherapy is associated with increased expression of DNA repair proteins and epithelial to mesenchymal transition (EMT) in patients with non-small cell lung cancer (NSCLC)