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Nallasivam Palanisamy
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Journal Articles

Abstract 5762: New perspective on racial disparities in prostate cancer: identification of new molecular subsets using whole-mount radical prostatectomy

Wei Zhao, Pin Li, Shannon Carskadon, Craig Rogers, James Peabody, Mani Menon, Dhananjay Chitale, Sean Williamson, Nilesh Gupta, Nallasivam Palanisamy
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 5762.
https://doi.org/10.1158/1538-7445.AM2023-5762
Published: 04 April 2023
View article titled, Abstract 5762: New perspective on racial disparities in prostate cancer: identification of new molecular subsets using whole-mount radical prostatectomy
Journal Articles

Abstract 747: Racial differences in clinical outcome in patients treated for clinically localized prostate cancer by radical prostatectomy

Pin Li, Wei Zhao, Shannon Carskadon, Craig Rogers, James Peabody, Mani Menon, Dhananjay Chitale, Sean Williamson, Nilesh Gupta, Nallasivam Palanisamy
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 747.
https://doi.org/10.1158/1538-7445.AM2023-747
Published: 04 April 2023
View article titled, Abstract 747: Racial differences in clinical outcome in patients treated for clinically localized prostate cancer by radical prostatectomy
Journal Articles

Abstract 140: Clonal evaluation of ERG/SPINK1 status to determine disease progression using whole mount prostatectomy specimens

Joonyoung Cho, In Hye Suh, HyeYoon Chang, Tae-Yeong Kwak, Sun Woo Kim, Nallasivam Palanisamy
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 140.
https://doi.org/10.1158/1538-7445.AM2023-140
Published: 04 April 2023
View article titled, Abstract 140: Clonal evaluation of ERG/SPINK1 status to determine disease progression using whole mount prostatectomy specimens
Journal Articles

Abstract 511: Prognostic relevance of 3q amplification in squamous cell carcinoma of the lung

Fawzi Abu Rous, Rebecca Chacko, Shannon Carskadon, Shanker Kalyana-Sundaram, Pin Li, Sunny Singh, Laila Poisson, Shirish Gadgeel, Nallasivam Palanisamy
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 511.
https://doi.org/10.1158/1538-7445.AM2022-511
Published: 15 June 2022
View article titled, Abstract 511: Prognostic relevance of 3q amplification in squamous cell carcinoma of the lung
Journal Articles

Abstract 5061: Molecular mapping of prostate cancer on whole mount prostatectomy specimens using deep neural networks to quantify genotypic heterogeneity

Joonyoung Cho, In Hye Suh, Tae-Yeong Kwak, Sun Woo Kim, Hyeyoon Chang, Nallasivam Palanisamy
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 5061.
https://doi.org/10.1158/1538-7445.AM2022-5061
Published: 15 June 2022
View article titled, Abstract 5061: Molecular mapping of prostate cancer on whole mount prostatectomy specimens using deep neural networks to quantify genotypic heterogeneity
Journal Articles

Abstract 2012: Recurrent rearrangements of NAALADL2 in prostate, breast, cervical, head and neck and lung squamous cell carcinoma

Pavithra D. Arachchige, Shannon Carskadon, James Hu, Justin Fernando, Darshan S. Chandrashekar, Nilesh S. Gupta, Sean R. Williamson, Dhananjay A. Chitale, Craig G. Rogers, James O. Peabody, Mani Menon, Tarek A. Bismar, Evelyn Jiagge, Sooryanarayana Varambally, Nallasivam Palanisamy
Journal: Cancer Research
Cancer Res (2020) 80 (16_Supplement): 2012.
https://doi.org/10.1158/1538-7445.AM2020-2012
Published: 15 August 2020
View article titled, Abstract 2012: Recurrent rearrangements of NAALADL2 in prostate, breast, cervical, head and neck and lung squamous cell carcinoma
Journal Articles

Abstract 5302: Molecular subtype stratification for prostate cancer from mpMRI and histopathology images using convolutional neural networks and transfer learning

Weiwei Zong, Eric N. Carver, Aharon Feldman, Nallasivam Palanisamy, Ning Wen
Journal: Cancer Research
Cancer Res (2020) 80 (16_Supplement): 5302.
https://doi.org/10.1158/1538-7445.AM2020-5302
Published: 15 August 2020
View article titled, Abstract 5302: Molecular subtype stratification for prostate cancer from mpMRI and histopathology images using convolutional neural networks and transfer learning
Journal Articles

Abstract 1332: High Throughput isolation and expansion of circulating tumor cells (CTCs) from Non-small cell lung cancer (NSCLC) patients for personalized treatments

Mina Zeinali, Maggie Lee, Arthi Nadhan, Anvya Mathur, Wei Huang, Eric Lin, Ramdane Harouaka, Max S. Wicha, Nallasivam Palanisamy, Mathias Hafner, Rishindra Reddy, Gregory P. Kalemkerian, Bryan J. Schneider, Khaled A. Hassan, Nithya Ramnath, Sunitha Nagrath
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 1332.
https://doi.org/10.1158/1538-7445.AM2019-1332
Published: 01 July 2019
View article titled, Abstract 1332: High Throughput isolation and expansion of circulating tumor cells (CTCs) from Non-small cell lung cancer (NSCLC) patients for personalized treatments
Journal Articles

Abstract 915: Pseudogene-associated recurrent gene fusion in prostate cancer

Balabhadrapatruni V. S. K. Chakravarthi, Shanker Kalyana-Sundaram, Pavithra D. Arachchige, Shannon Carskadon, Satya S. Pathi, Mireya Diaz-Insua, Craig Rogers, James Peabody, Clara Hwang, Mani Menon, Sean Williamson, Gupta Nilesh, Sooryanarayana Varambally, Nallasivam Palanisamy
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 915.
https://doi.org/10.1158/1538-7445.AM2019-915
Published: 01 July 2019
View article titled, Abstract 915: Pseudogene-associated recurrent gene fusion in prostate cancer
Journal Articles

Abstract 4688: Evaluation of tumor heterogeneity in prostate biopsy samples

Pavithra D. Arachchige, Shannon Carskadon, Gaury Dhamdhere, Mireya Diaz-Insua, Rogers Craig, James Peabody, Mani Menon, Sean Williamson, Nilseh Gupta, Nallasivam Palanisamy
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 4688.
https://doi.org/10.1158/1538-7445.AM2019-4688
Published: 01 July 2019
View article titled, Abstract 4688: Evaluation of tumor heterogeneity in prostate biopsy samples
Journal Articles

Abstract 5225: Androgen deprivation upregulates SPINK1 expression and potentiates cellular plasticity in prostate cancer

Ritika Tiwari, Nishat Manzar, Vipul Bhatia, Anjali Yadav, Shannon Carskadon, Nilesh Gupta, Amina Zoubeidi, Nallasivam Palanisamy, Bushra Ateeq
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 5225.
https://doi.org/10.1158/1538-7445.AM2019-5225
Published: 01 July 2019
View article titled, Abstract 5225: Androgen deprivation upregulates SPINK1 expression and potentiates cellular plasticity in prostate cancer
Journal Articles

Abstract 4693: Evaluation of prostate tumor molecular heterogeneity using whole mount radical prostatectomy by dual immunohistochemistry and dual RNA in situ hybridization

Pavithra D. Arachchige, Shannon Carskadon, Gaury Dhamdhere, Mireya Diaz-Insua, Hans Stricker, Craig Rogers, James Peabody, Mani Menon, Sean Williamson, Nilesh Gupta, Nallasivam Palanisamy
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 4693.
https://doi.org/10.1158/1538-7445.AM2019-4693
Published: 01 July 2019
View article titled, Abstract 4693: Evaluation of prostate tumor molecular heterogeneity using whole mount radical prostatectomy by dual immunohistochemistry and dual RNA <em>in situ</em> hybridization
Journal Articles

Abstract 4385: Eukaryotic translation initiation factor 4 gamma 1 (EIF4G1): A target for cancer therapeutic intervention

Praveen Jaiswal, Sweaty Koul, Nallasivam Palanisamy, Hari K. Koul
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 4385.
https://doi.org/10.1158/1538-7445.AM2019-4385
Published: 01 July 2019
View article titled, Abstract 4385: Eukaryotic translation initiation factor 4 gamma 1 (EIF4G1): A target for cancer therapeutic intervention
Journal Articles

Poor Prognosis Indicated by Venous Circulating Tumor Cell Clusters in Early-Stage Lung Cancers

Vasudha Murlidhar, Rishindra M. Reddy, Shamileh Fouladdel, Lili Zhao, Martin K. Ishikawa, Svetlana Grabauskiene, Zhuo Zhang, Jules Lin, Andrew C. Chang, Philip Carrott, William R. Lynch, Mark B. Orringer, Chandan Kumar-Sinha, Nallasivam Palanisamy, David G. Beer, Max S. Wicha, Nithya Ramnath, Ebrahim Azizi, Sunitha Nagrath
Journal: Cancer Research
Series: Author Choice
Cancer Res (2017) 77 (18): 5194–5206.
https://doi.org/10.1158/0008-5472.CAN-16-2072
Published: 14 September 2017
View article titled, Poor Prognosis Indicated by Venous Circulating Tumor Cell Clusters in Early-Stage Lung Cancers
Open the PDF for Poor Prognosis Indicated by Venous Circulating Tumor Cell Clusters in Early-Stage Lung Cancers in another window
Includes: Supplementary data
Journal Articles

Abstract 1763: A novel RNA in situ hybridization approach highly sensitive for detection of Merkel cell polyomavirus

Lisha Wang, Paul W. Harms, Nallasivam Palanisamy, Shannon Carskadon, Xuhong Cao, Javed Siddiqui, Rajiv M. Patel, Sylvia Zelenka-Wang, Timothy M. Johnson, Alison Durham, Fengyun Su, Sudhanshu Shukla, Rohit Mehra, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 1763.
https://doi.org/10.1158/1538-7445.AM2017-1763
Published: 01 July 2017
View article titled, Abstract 1763: A novel RNA <em>in situ</em> hybridization approach highly sensitive for detection of Merkel cell polyomavirus
Journal Articles

HER2 and EGFR Overexpression Support Metastatic Progression of Prostate Cancer to Bone

Kathleen C. Day, Guadalupe Lorenzatti Hiles, Molly Kozminsky, Scott J. Dawsey, Alyssa Paul, Luke J. Broses, Rajal Shah, Lakshmi P. Kunja, Christopher Hall, Nallasivam Palanisamy, Stephanie Daignault-Newton, Layla El-Sawy, Steven James Wilson, Andrew Chou, Kathleen Woods Ignatoski, Evan Keller, Dafydd Thomas, Sunitha Nagrath, Todd Morgan, Mark L. Day
Journal: Cancer Research
Series: Author Choice
Cancer Res (2017) 77 (1): 74–85.
https://doi.org/10.1158/0008-5472.CAN-16-1656
Published: 02 January 2017
View article titled, HER2 and EGFR Overexpression Support Metastatic Progression of Prostate Cancer to Bone
Open the PDF for HER2 and EGFR Overexpression Support Metastatic Progression of Prostate Cancer to Bone in another window
Includes: Supplementary data
Journal Articles

Abstract 2849: RNA-binding protein FXR1 negatively regulates senescence by destabilizing mRNA CDKN1A and stabilizing noncoding RNA telomerase RNA component

Mrinmoyee Majumder, Nallasivam Palanisamy, Shuo Qie, Terry Day, Alan J. Diehl, Viswanathan Palanisamy
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 2849.
https://doi.org/10.1158/1538-7445.AM2016-2849
Published: 15 July 2016
View article titled, Abstract 2849: RNA-binding protein FXR1 negatively regulates senescence by destabilizing mRNA CDKN1A and stabilizing noncoding RNA telomerase RNA component
Journal Articles

Abstract PR07: The landscape of molecular aberrations in pediatric and young adult cancer patients undergoing clinical sequencing for disease management: Novel biological findings from the Peds-MiOncoSeq study

John R. Prensner, Rajen J. Mody, Yi-Mi Wu, Robert J. Lonigro, Xuhong Cao, Sameek Roychowdhury, Pankaj Vats, Kevin M. Frank, Irfan Asangani, Nallasivam Palanisamy, Raja M. Rabah, Laxmi Priya Kunju, Jessica Everett, Elena M. Stoffel, Jeffrey W. Innis, Dan R. Robinson, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2016) 76 (5_Supplement): PR07.
https://doi.org/10.1158/1538-7445.PEDCA15-PR07
Published: 04 April 2016
View article titled, Abstract PR07: The landscape of molecular aberrations in pediatric and young adult cancer patients undergoing clinical sequencing for disease management: Novel biological findings from the Peds-MiOncoSeq study
Journal Articles

The Distinctive Mutational Spectra of Polyomavirus-Negative Merkel Cell Carcinoma

Paul William Harms, Pankaj Vats, Monique Elise Verhaegen, Dan R. Robinson, Yi-Mi Wu, Saravana Mohan Dhanasekaran, Nallasivam Palanisamy, Javed Siddiqui, Xuhong Cao, Fengyun Su, Rui Wang, Hong Xiao, Lakshmi P. Kunju, Rohit Mehra, Scott A. Tomlins, Douglas Randall Fullen, Christopher Keram Bichakjian, Timothy M. Johnson, Andrzej Antoni Dlugosz, Arul M. Chinnaiyan
Journal: Cancer Research
Cancer Res (2015) 75 (18): 3720–3727.
https://doi.org/10.1158/0008-5472.CAN-15-0702
Published: 14 September 2015
View article titled, The Distinctive Mutational Spectra of Polyomavirus-Negative Merkel Cell Carcinoma
Open the PDF for The Distinctive Mutational Spectra of Polyomavirus-Negative Merkel Cell Carcinoma in another window
Includes: Supplementary data
Journal Articles

Abstract 1585: Application of a graphene oxide based microfluidic device (GO Chip) to prostate cancer circulating tumor cell capture and analysis

Molly Kozminsky, Hyeun Joong Yoon, Nallasivam Palanisamy, Kathleen Cooney, Maha Hussain, Ajjai Alva, Todd Morgan, Sunitha Nagrath
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 1585.
https://doi.org/10.1158/1538-7445.AM2015-1585
Published: 01 August 2015
View article titled, Abstract 1585: Application of a graphene oxide based microfluidic device (GO Chip) to prostate cancer circulating tumor cell capture and analysis