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Nadeem Riaz
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Journal Articles

Abstract 1125: Neoantigen immunogenicity landscapes and evolution of tumor ecosystems during immunotherapy with nivolumab

Tyler Joseph Alban, Nadeem Riaz, Prerana Parthasarathy, Vlad Makarov, Slav Kendall, Seong-Keun Yoo, Rachna Shah, Nils Weinhold, Raghvendra Srivastava, Xiaoxiao Ma, Chirag Krishna, Edward Garon, Wallace Akerley, Ben Creelan, Nivedita Aanuren, Diego Chowell, William Geese, Naiyer Rizvi, Timothy Chan
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 1125.
https://doi.org/10.1158/1538-7445.AM2023-1125
Published: 04 April 2023
View article titled, Abstract 1125: Neoantigen immunogenicity landscapes and evolution of tumor ecosystems during immunotherapy with nivolumab
Journal Articles

Abstract 6421: Molecular profiles and single cell analysis identify immunogenic pancreatic ductal adenocarcinoma (iPDAC)

Wungki Park, Catherine O'Connor, Shigeaki Umeda, Roshan Sharma, Yingjie Zhu, Elias-Ramzey Karnoub, Anna Varghese, Kevin C. Soares, Alejandro Jimemez, Asli Yavas, Kenneth H. Yu, Balachandran P. Vinod, Joanne F. Chou, Danny N. Khalil, Kelsen David, Hulya Sahin Ozkan, Olca Basturk, Marinela Capanu, Tal Nawy, Michael F. Berger, Ghassan K. Abou-Alfa, Jorge S. Reis-Filho, Ronan Chaligne, Nadeem Riaz, Dana Pe'er, Christine Iacobuzio-Donahue, Eileen M. O'Reilly
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 6421.
https://doi.org/10.1158/1538-7445.AM2023-6421
Published: 04 April 2023
View article titled, Abstract 6421: Molecular profiles and single cell analysis identify immunogenic pancreatic ductal adenocarcinoma (iPDAC)
Journal Articles

Abstract 5688: RNA-mediated DNA repair: A novel repair pathway in homologous recombination-deficient cancers

Manisha Jalan, Juber Patel, Kyrie S Olsen, Sana Ahmed-Seghir, Daniel S Higginson, Jorge S Reis-Filho, Nadeem Riaz, Simon N Powell
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 5688.
https://doi.org/10.1158/1538-7445.AM2022-5688
Published: 15 June 2022
View article titled, Abstract 5688: RNA-mediated DNA repair: A novel repair pathway in homologous recombination-deficient cancers
Journal Articles

Colorectal Cancer Develops Inherent Radiosensitivity That Can Be Predicted Using Patient-Derived Organoids

Kuo-Shun Hsu, Mohammad Adileh, Maria Laura Martin, Vladimir Makarov, Jiapeng Chen, Chao Wu, Sahra Bodo, Stefan Klingler, Charles-Etienne Gabriel Sauvé, Bryan C. Szeglin, J. Joshua Smith, Zvi Fuks, Nadeem Riaz, Timothy A. Chan, Makoto Nishimura, Philip B. Paty, Richard Kolesnick
Journal: Cancer Research
Cancer Res (2022) 82 (12): 2298–2312.
https://doi.org/10.1158/0008-5472.CAN-21-4128
Published: 15 June 2022
View article titled, Colorectal Cancer Develops Inherent Radiosensitivity That Can Be Predicted Using Patient-Derived Organoids
Open the PDF for Colorectal Cancer Develops Inherent Radiosensitivity That Can Be Predicted Using Patient-Derived Organoids in another window
Includes: Supplementary data
Journal Articles

Abstract PD1-06: Apobec mutagenesis is a pervasive feature of poor prognosis breast cancer associating with ESR1 wild type, endocrine resistant disease

Antonio Marra, Andrea Gazzo, Pier Selenica, Xin Pei, Avantika Gupta, Fresia Pareja, Giuseppe Curigliano, Reuben Harris, Nadeem Riaz, Jorge S. Reis-Filho, Sarat Chandarlapaty
Journal: Cancer Research
Cancer Res (2022) 82 (4_Supplement): PD1-06.
https://doi.org/10.1158/1538-7445.SABCS21-PD1-06
Published: 15 February 2022
View article titled, Abstract PD1-06: Apobec mutagenesis is a pervasive feature of poor prognosis breast cancer associating with <em>ESR1</em> wild type, endocrine resistant disease
Journal Articles

Abstract P2-06-04: Pathognomonic long molecule footprints of backup repair pathways in homologous recombination deficient cancers

Jeremy Setton, Kevin Hadi, Huasong Tian, Arnaud Da Cruz Paula, Joel Rosiene, Zi-Ning Choo, Julie Behr, Xiaotong Yao, Olivier Elemento, Britta Weigelt, Nadeem Riaz, Jorge S Reis-Filho, Marcin Imielinski, Simon N Powell
Journal: Cancer Research
Cancer Res (2022) 82 (4_Supplement): P2-06-04.
https://doi.org/10.1158/1538-7445.SABCS21-P2-06-04
Published: 15 February 2022
View article titled, Abstract P2-06-04: Pathognomonic long molecule footprints of backup repair pathways in homologous recombination deficient cancers
Journal Articles

Abstract 3557: Genetic algorithms to identify homologous recombination deficiency (HRD) in pancreas adenocarcinoma

Wungki Park, Jiapeng Chen, Joanne F. Chou, Christine Iacobuzio-Donague, Nadeem Riaz, Eileen M. O'Reilly
Journal: Cancer Research
Cancer Res (2020) 80 (16_Supplement): 3557.
https://doi.org/10.1158/1538-7445.AM2020-3557
Published: 15 August 2020
View article titled, Abstract 3557: Genetic algorithms to identify homologous recombination deficiency (HRD) in pancreas adenocarcinoma
Journal Articles

Abstract P6-09-01: RAD51B loss-of-function variants confer susceptibility to hereditary breast and ovarian cancers and result in tumors with genomic features of homologous recombination repair defects

Diana SReis-FilhoReis-Filho Mandelker, Semanti Mukherjee, Jeremy Setton, Pier Selenica, Yelena Kemel, Ozge Ceyhan-Birsoy, Margaret Sheehan, Kaitlyn Tkachuk, David N Brown, Simon Powell, Britta Weigelt, Mark E Robson, Nadeem Riaz, Kenneth Offit, Jorge S Reis-Filho
Journal: Cancer Research
Cancer Res (2020) 80 (4_Supplement): P6-09-01.
https://doi.org/10.1158/1538-7445.SABCS19-P6-09-01
Published: 15 February 2020
View article titled, Abstract P6-09-01: RAD51B loss-of-function variants confer susceptibility to hereditary breast and ovarian cancers and result in tumors with genomic features of homologous recombination repair defects
Journal Articles

Abstract P4-05-01: Massively parallel sequencing analysis of microsatellite instability in breast cancer

Pier Selenica, Fresia Pareja, Lorenzo Ferrando, David N Brown, Nadeem Riaz, Britta Weigelt, Joshua Z Drago, Mark E Robson, Pedram Razavi, Sarat Chandarlapaty, Jorge S Reis-Filho
Journal: Cancer Research
Cancer Res (2020) 80 (4_Supplement): P4-05-01.
https://doi.org/10.1158/1538-7445.SABCS19-P4-05-01
Published: 15 February 2020
View article titled, Abstract P4-05-01: Massively parallel sequencing analysis of microsatellite instability in breast cancer
Journal Articles

Abstract 4619: Integrated genomic analysis of Hurthle cell carcinoma reveals TMEM233/PRKAB1 fusion as a novel oncogenic driver

Yiyu Dong, Ian Ganly, Vladimir Makarov, Fengshen Kuo, Shyamprasad Deraje, Ed Reznik, Venkatraman Seshan, Gouri Nanjangud, Luc Morris, Nadeem Riaz, Eric Sherman, Ronald Ghossein, James Fagin, Timothy Chan
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 4619.
https://doi.org/10.1158/1538-7445.AM2018-4619
Published: 01 July 2018
View article titled, Abstract 4619: Integrated genomic analysis of Hurthle cell carcinoma reveals TMEM233/PRKAB1 fusion as a novel oncogenic driver
Journal Articles

Abstract 832: In vitro characterization and clinical correlation of BRCAness as a personalized biomarker for radiosensitization with homologous recombination-directed therapies

Jennifer Ma, Andrew C. Bell, Jeremy Setton, Justin Haseltine, Marcher Thompson, Rachna Shah, Benjamin H. Lok, Robert Delsite, Rebecca Aft, Nadeem Riaz, Simon Powell
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 832.
https://doi.org/10.1158/1538-7445.AM2017-832
Published: 01 July 2017
View article titled, Abstract 832: <em>In vitro</em> characterization and clinical correlation of BRCAness as a personalized biomarker for radiosensitization with homologous recombination-directed therapies
Journal Articles

Abstract 2988: Immunogenomic analyses of tumor cells and microenvironment in patients with advanced melanoma before and after treatment with nivolumab

Timothy A. Chan, Nadeem Riaz, Jonathan J. Havel, Vladimir Makarov, Alexis Desrichard, Jennifer S. Sims, F. Stephen Hodi, Salvador Martín-Algarra, William H. Sharfman, Shailender Bhatia, Wen-Jen Hwu, Thomas F. Gajewski, Craig L. Slingluff, Sviatoslav M. Kendall, Han Chang, John-William Sidhom, Jonathan P. Schneck, Nils Weinhold, Christine E. Horak, Walter J. Urba
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 2988.
https://doi.org/10.1158/1538-7445.AM2017-2988
Published: 01 July 2017
View article titled, Abstract 2988: Immunogenomic analyses of tumor cells and microenvironment in patients with advanced melanoma before and after treatment with nivolumab
Journal Articles

Abstract 3756: PARP inhibitor sensitivity in small cell lung cancer cell lines and patient-derived xenografts correlates with SLFN11 expression but not with structural homologous recombination deficiency

Benjamin H. Lok, Ying Feng, G. Karen Yu, Eric E. Gardner, Nadeem Riaz, Yuanbin (Kevin) Ru, Elisa de Stanchina, Simon N. Powell, Jerry Shen, John T. Poirier, Charles M. Rudin
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 3756.
https://doi.org/10.1158/1538-7445.AM2016-3756
Published: 15 July 2016
View article titled, Abstract 3756: PARP inhibitor sensitivity in small cell lung cancer cell lines and patient-derived xenografts correlates with SLFN11 expression but not with structural homologous recombination deficiency