1-20 of 94
Michael F. Berger
Close
Save search
Follow your search
Access your saved searches in your account
Would you like to receive an alert when new items match your search?
Close Modal
Sort by
Journal Articles

Abstract 1983: Phase II study of rucaparib and nivolumab in patients with leiomyosarcoma

Free
Carmelina Charalambous, Ronak H. Shah, Michael F. Berger, Sujana Movva
Journal: Cancer Research
Cancer Res (2025) 85 (8_Supplement_1): 1983.
https://doi.org/10.1158/1538-7445.AM2025-1983
Published: 21 April 2025
View articletitled, Abstract 1983: Phase II study of rucaparib and nivolumab in patients with leiomyosarcoma
Journal Articles

Abstract 2464: Inferring genomic properties from H&E whole-slide images of >60,000 solid tumors

Free
Kevin M. Boehm, Arfath Pasha, Armaan Kohli, Raymond Lim, Tom Pollard, Darin Moore, JianJiong Gao, Nikolaos M. Dimitriou, Madison Darmofal, Meera Hameed, Ahmet Dogan, Natasha Rekhtman, Klaus J. Busam, Lora H. Ellenson, Jie-Fu Chen, Fresia Pareja, Daniel Gomez, Hikmat Al-Ahmadie, Nancy Lee, Eric Sherman, Jason Chang, Himanshu Nagar, Britta Weigelt, James Fagin, Susan Fu, Jonathan Alarcon, Neelraj Patil, Areej Alsaafin, Georgios Asimomitis, Anika Begum, Andrew Aukerman, Justin Jee, Christopher Fong, Michele Waters, Lior Z. Braunstein, Michael F. Berger, Luke R. Pike, Pedram Razavi, Paul Romesser, Walid K. Chatila, Aasiya Islam, Elana Sverdlik, Ino de Brujin, Karl Pichotta, Nikolaus Schultz, Sohrab P. Shah, Francisco Sanchez-Vega
Journal: Cancer Research
Cancer Res (2025) 85 (8_Supplement_1): 2464.
https://doi.org/10.1158/1538-7445.AM2025-2464
Published: 21 April 2025
View articletitled, Abstract 2464: Inferring genomic properties from H&E whole-slide images of >60,000 solid tumors
Journal Articles

Abstract 5043: reVUE: repository for variants with unexpected effects

Free
Xiang Li, Ino de Bruijn, Thomas Y. Cong, Walid Chatila, Hongxin Zhang, Moriah Nissan, Amanda Dhaneshwar, Sara E. DiNapoli, Erika Gedvilaite, Bryan Lai, Selcuk Onur Sumer, Aditi Gopalan, Tonatiuh Gonzalez, Madelaine Rangel, Trevor J. Pugh, Rose Brannon, Michael F. Berger, Jianjiong Gao, Nikolaus Schultz, Debyani Chakravarty
Journal: Cancer Research
Cancer Res (2025) 85 (8_Supplement_1): 5043.
https://doi.org/10.1158/1538-7445.AM2025-5043
Published: 21 April 2025
View articletitled, Abstract 5043: reVUE: repository for variants with unexpected effects
Journal Articles

Abstract 2552: TET2-mutant clonal hematopoiesis enrichment in the tumor microenvironment is an actionable driver of treatment resistance in solid tumors: Thyroid cancer as a paradigm

Free
Pablo Sanchez Vela, Vera Tiedje, Julie L. Yang, Brian R. Untch, Laura Boucai, Aaron J. Stonestrom, Alberto Bueno Costa, Sebastià Franch Expósito, Sebastià Franch Expósito, Avi Srivastava, Marina Kerpelev, Jillian Greenberg, Matthew Wereski, Amanda Kulick, Kevin Chen, Tianyue Qin, Soo-Yeon Im, Anthony R. Martinez Benitez, Raquel Pluvinet, Merve Sahin, Kamal Menghrajani, Gnana P. Krishnamoorthy, Elisa de Stanchina, Ahmet Zehir, Rahul Satija, Jeffrey Knauf, Robert L. Bowman, Manel Esteller, Sean Devlin, Michael F. Berger, Richard P. Koche, Ross L. Levine, James A. Fagin
Journal: Cancer Research
Cancer Res (2025) 85 (8_Supplement_1): 2552.
https://doi.org/10.1158/1538-7445.AM2025-2552
Published: 21 April 2025
View articletitled, Abstract 2552: TET2-mutant clonal hematopoiesis enrichment in the tumor microenvironment is an actionable driver of treatment resistance in solid tumors: Thyroid cancer as a paradigm
Journal Articles

Abstract 7105: Analyses of real-world clinico-genomic and demographic data highlight the multifactorial causes of poor colorectal cancer outcomes in patients of African ancestry

Free
Sharafudeen D. Abubakar, Henry Walch, Christina I. Lee, Chin-Tung Chen, Kanika Arora, Farheen Shah, Tejiri Agbamu, Michele Waters, Christopher Fong, Justin Jee, Michael F. Berger, Karuna Ganesh, Debyani Chakravarty, Walid K. Chatila, Nikolaus Schultz, Rona Yaeger, Julio Garcia-Aguilar, Francisco Sanchez-Vega
Journal: Cancer Research
Cancer Res (2025) 85 (8_Supplement_1): 7105.
https://doi.org/10.1158/1538-7445.AM2025-7105
Published: 21 April 2025
View articletitled, Abstract 7105: Analyses of real-world clinico-genomic and demographic data highlight the multifactorial causes of poor colorectal cancer outcomes in patients of African ancestry
Journal Articles

Abstract 5361: Clinical implications of The Cancer Genome Atlas molecular classification system in esophagogastric cancer

Free
Henry Walch, Raktim Borpatragohain, Justin Jee, Walid Chatila, Christopher Fong, Steven B. Maron, Geoffrey Ku, David H. Ilson, Yelena Y. Janjigian, Abraham J. Wu, Pari Shah, Daniel G. Coit, Manjit S. Bains, Valerie W. Rusch, Bernard Park, Matthew Bott, Katherine Gray, David R. Jones, Michael F. Berger, Nikolaus Schultz, Vivian E. Strong, Daniela Molena, Smita Sihag
Journal: Cancer Research
Cancer Res (2025) 85 (8_Supplement_1): 5361.
https://doi.org/10.1158/1538-7445.AM2025-5361
Published: 21 April 2025
View articletitled, Abstract 5361: Clinical implications of The Cancer Genome Atlas molecular classification system in esophagogastric cancer
Journal Articles

Abstract 3386: Clinicogenomic comparison of patients with liver-avid/lung-adverse and lung-avid/liver-adverse patterns of metastases highlights commonalities across cancer types

Free
John Nguyen, Walid K. Chatila, Paolo Manca, Henry Walch, Subhiksha Nandakumar, Pedram Razavi, Eileen M. O'Reilly, Yelena Y. Janjigian, Rona Yaeger, Karuna Ganesh, Michael F. Berger, Nikolaus Schultz, Francisco Sanchez-Vega
Journal: Cancer Research
Cancer Res (2025) 85 (8_Supplement_1): 3386.
https://doi.org/10.1158/1538-7445.AM2025-3386
Published: 21 April 2025
View articletitled, Abstract 3386: Clinicogenomic comparison of patients with liver-avid/lung-adverse and lung-avid/liver-adverse patterns of metastases highlights commonalities across cancer types
Journal Articles

Abstract 3935: Durable inhibition of ERK phosphorylation is required for tumor regression in novel human and mouse models of NF1-inactivated melanoma

Free
Olvania-Danyca Hilaire, Alexis M. Jones, Moriah H. Nissan, Sebastien Monette, Jordan Eichholz, Sandra Misale, Isabell Schulze, Naresh Vasani, Cailian Liu, Xia Yang, Elisa De Stanchina, Nikolaus Schultz, Michael F. Berger, Neal Rosen, Taha Merghoub, David B. Solit, Aphrothiti J. Hanrahan
Journal: Cancer Research
Cancer Res (2025) 85 (8_Supplement_1): 3935.
https://doi.org/10.1158/1538-7445.AM2025-3935
Published: 21 April 2025
View articletitled, Abstract 3935: Durable inhibition of ERK phosphorylation is required for tumor regression in novel human and mouse models of NF1-inactivated melanoma
Journal Articles

Abstract 1066: OncoKBTM, MSK’s precision oncology knowledge base: 2024 updates

Free
Moriah H. Nissan, Sarah P. Suehnholz, Hongxin Zhang, Ritika Kundra, Calvin Lu, Amanda Dhaneshwar, Nicole Fernandez, Kelly Cavender, Benjamin Preiser, John Konecny, Kseniya Petrova, Mark Ewalt, Maria E. Arcila, Marc Ladanyi, Michael F. Berger, Anoop Balakrishnan-Rema, Aijazuddin Syed, A. Rose Brannon, Ahmet Dogan, Diana Mandelker, Zsofia Stadler, Alexander Drilon, David B. Solit, Ross Levine, Nikolaus Schultz, Debyani Chakravarty
Journal: Cancer Research
Cancer Res (2025) 85 (8_Supplement_1): 1066.
https://doi.org/10.1158/1538-7445.AM2025-1066
Published: 21 April 2025
View articletitled, Abstract 1066: OncoKBTM, MSK’s precision oncology knowledge base: 2024 updates
Journal Articles

Abstract 6129: Emerging disparities in the clinical actionability landscape for patients with inferred African ancestry

Free
Kanika Arora, Sarah P. Suehnholz, Hongxin Zhang, Ritika Kundra, Subhiksha Nandakumar, Moriah Nissan, A. Rose Brannon, Chaitanya Bandlamudi, Marc Ladanyi, Alexander Drilon, David B. Solit, Nikolaus Schultz, Michael F. Berger, Debyani Chakravarty
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 6129.
https://doi.org/10.1158/1538-7445.AM2024-6129
Published: 22 March 2024
View articletitled, Abstract 6129: Emerging disparities in the clinical actionability landscape for patients with inferred African ancestry
Journal Articles

Abstract 3703: Utility of circulating tumor DNA (ctDNA) from cerebrospinal fluid (CSF) for prognosis of patients with recurrent high grade glioma

Free
Bridget M. Holle, Subhiksha Nandakumar, Christoph Kreitzer, Timothy Song, Marlene Tartaro, Charli Ann J. Hertz, Johnathan Rafailov, Carl Campos, Anne S. Reiner, Robert Young, Alicia Meng, Luca Pasquini, A. Rose Brannon, Nicholas D. Socci, Maria E. Arcila, David B. Solit, Michael F. Berger, Nikolaus Schultz, Ingo K. Mellinghoff, Alexandra M. Miller
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 3703.
https://doi.org/10.1158/1538-7445.AM2024-3703
Published: 22 March 2024
View articletitled, Abstract 3703: Utility of circulating tumor DNA (ctDNA) from cerebrospinal fluid (CSF) for prognosis of patients with recurrent high grade glioma
Journal Articles

Abstract 1202: Signatures of selection for biallelic inactivation in tumor suppressor genes across cancer types

Free
Mark R. Zucker, Maria A. Perry, Arielle Elkrief, Anton Safonov, Rohit Thummalapalli, Samuel I. Gould, Debyani Chakravarty, Rose Brannon, Marc Ladanyi, Pedram Razavi, Mark T. Donoghue, Yonina R. Murciano-Goroff, Francisco J. Sánchez-Rivera, Yuan Chen, Ronglai Shen, Sarat Chandarlapaty, David B. Solit, Nikolaus Schultz, Michael F. Berger, Adam J. Schoenfeld, Jason Chang, Ed Reznik, Chaitanya Bandlamudi
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 1202.
https://doi.org/10.1158/1538-7445.AM2024-1202
Published: 22 March 2024
View articletitled, Abstract 1202: Signatures of selection for biallelic inactivation in tumor suppressor genes across cancer types
Journal Articles

Abstract 3544: OncoKB™, MSK’s precision oncology knowledge base: 2023 updates

Free
Sarah P. Suehnholz, Moriah Nissan, Hongxin Zhang, Ritika Kundra, Calvin Lu, Amanda Dhaneshwar, Nicole Fernandez, Benjamin Preiser, Maria E. Arcila, Marc Ladanyi, Michael F. Berger, Aijazuddin Syed, A. Rose Brannon, Ross Levine, Ahmet Dogan, Alexander Drilon, David B. Solit, Nikolaus Schultz, Debyani Chakravarty
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 3544.
https://doi.org/10.1158/1538-7445.AM2024-3544
Published: 22 March 2024
View articletitled, Abstract 3544: OncoKB™, MSK’s precision oncology knowledge base: 2023 updates
Journal Articles

Abstract 1757: Pan-cancer analysis identifies signatures of HRD-positivity in germline BRCA1/2 mutated non-BRCA associated cancers

Free
Daniel M. Muldoon, Miika Mehine, Samuel Tischfield, A. Rose Brannon, Marc Ladanyi, Zsofia K. Stadler, David B. Solit, Alexander Drilon, Michael F. Berger, Yonina Murciano-Goroff, Chaitanya Bandlamudi
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 1757.
https://doi.org/10.1158/1538-7445.AM2024-1757
Published: 22 March 2024
View articletitled, Abstract 1757: Pan-cancer analysis identifies signatures of HRD-positivity in germline BRCA1/2 mutated non-BRCA associated cancers
Journal Articles

Abstract 889: Machine learning-enhanced targeted versus whole-exome sequencing as a guide to cancer care

Free
Hyung Jun Woo, Shweta S. Chavan, Aphrothiti J. Hanrahan, Allison L. Richards, Anne Marie Noronha, Ahmet Zehir, Alexander Drilon, Michael F. Berger, David B. Solit, Mark T. Donoghue
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 889.
https://doi.org/10.1158/1538-7445.AM2024-889
Published: 22 March 2024
View articletitled, Abstract 889: Machine learning-enhanced targeted versus whole-exome sequencing as a guide to cancer care
Journal Articles

Abstract C074: Clinico-genomic characterization of N=2,460 pancreatic adenocarcinoma identifies KRASMUT dosage as prognostic of overall survival across disease stages

Free
Anna M. Varghese, Maria A. Perry, Daniel Muldoon, Subhiksha Nandakumar, Amanda Erakky, Bastien Nguyen, Amanda Zucker, Hulya Sahin Ozkan, Olca Basturk, Debyani Chakravarty, David P. Kelsen, Wungki Park, Kenneth H. Yu, Alice C. Wei, Nikolaus Schultz, Michael F. Berger, Christine Iacobuzio-Donahue, Chaitanya Bandlamudi, Eileen M. O'Reilly
Journal: Cancer Research
Cancer Res (2024) 84 (2_Supplement): C074.
https://doi.org/10.1158/1538-7445.PANCA2023-C074
Published: 16 January 2024
View articletitled, Abstract C074: Clinico-genomic characterization of N=2,460 pancreatic adenocarcinoma identifies KRASMUT dosage as prognostic of overall survival across disease stages
Journal Articles

Abstract 1908: Clinical genomic profiling identifies lower frequency of therapeutically actionable alterations and lower prognostic value of APC inactivation in colorectal cancer patients of African ancestry

Free
Henry Walch, Anisha Luthra, Kanika S. Arora, Michele Waters, Samantha Chin, Christopher J. Fong, Doori Rose, Hannah Williams, Jeese J. Smith, Nikolaus Schultz, Michael F. Berger, Karuna Ganesh, Julio Garcia-Aguilar, Rona Yaeger, Walid K. Chatila, Francisco Sanchez-Vega
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 1908.
https://doi.org/10.1158/1538-7445.AM2023-1908
Published: 29 May 2023
View articletitled, Abstract 1908: Clinical genomic profiling identifies lower frequency of therapeutically actionable alterations and lower prognostic value of APC inactivation in colorectal cancer patients of African ancestry
Journal Articles

Abstract 6421: Molecular profiles and single cell analysis identify immunogenic pancreatic ductal adenocarcinoma (iPDAC)

Free
Wungki Park, Catherine O'Connor, Shigeaki Umeda, Roshan Sharma, Yingjie Zhu, Elias-Ramzey Karnoub, Anna Varghese, Kevin C. Soares, Alejandro Jimemez, Asli Yavas, Kenneth H. Yu, Balachandran P. Vinod, Joanne F. Chou, Danny N. Khalil, Kelsen David, Hulya Sahin Ozkan, Olca Basturk, Marinela Capanu, Tal Nawy, Michael F. Berger, Ghassan K. Abou-Alfa, Jorge S. Reis-Filho, Ronan Chaligne, Nadeem Riaz, Dana Pe'er, Christine Iacobuzio-Donahue, Eileen M. O'Reilly
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 6421.
https://doi.org/10.1158/1538-7445.AM2023-6421
Published: 04 April 2023
View articletitled, Abstract 6421: Molecular profiles and single cell analysis identify immunogenic pancreatic ductal adenocarcinoma (iPDAC)
Journal Articles

Abstract 5214: Expanding the spectrum of germline-driven cancers by leveraging population-scale targeted tumor and normal sequencing

Free
Miika Mehine, Rebecca Caeser, Yelena Kemel, Daniel Muldoon, Sebastià Franch-Expósito, A. Rose Brannon, Aijazuddin Syed, Ozge Ceyhan-Birsoy, Maksym Misyura, Panieh Terraf, David B. Solit, Marc Ladanyi, Kenneth Offit, Zsofia K. Stadler, Diana L. Mandelker, Yonina R. Murciano-Goroff, Charles M. Rudin, Michael F. Berger, Chaitanya Bandlamudi
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 5214.
https://doi.org/10.1158/1538-7445.AM2023-5214
Published: 04 April 2023
View articletitled, Abstract 5214: Expanding the spectrum of germline-driven cancers by leveraging population-scale targeted tumor and normal sequencing
Journal Articles

Abstract 4260: Understanding genomic and social determinants of cancer immunotherapy outcome across ancestry

Free
Christopher J. Fong, Michele Waters, Karl Pichotta, Justin Jee, Devika R. Jutagir, David Ma, Tomin Perea-Chamblee, Susie Kim, Kanika Arora, Brooke Mastrogiacomo, Thinh Tran, Steven Maron, Mirella Altoe, Anisha Luthra, Joseph Kholodenko, Arfath Patha, Doori Rose, Michael F. Berger, Gregory J. Riely, Nikolaus Schultz, Sanna Goyert, Adam Schoenfeld, Francesca Gany, Jian Carrot-Zhang
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 4260.
https://doi.org/10.1158/1538-7445.AM2023-4260
Published: 04 April 2023
View articletitled, Abstract 4260: Understanding genomic and social determinants of cancer immunotherapy outcome across ancestry