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Ludmila Prokunina-Olsson
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Journal Articles

Abstract C055: Unraveling pancreatic cancer susceptibility at 5p15.33: Functional characterization of a novel VNTR element

Aidan O'Brien, Hyunkyung Kong, Minal Patel, Katelyn E Connelly, Mai Xu, Irene Collins, Jun Zhong, Jason Hoskins, Michelle Ho, Brenen Papenburg, Mark M Iles, Matthew H Law, Maria-Teresa Landi, Rachael Stolzenber- Solomon, Brian M Wolpin, Alison P Klein, Nick Orr, Stephen J Chanock, Sara Lindström, Marc-Henri Stern, Ludmila Prokunina-Olsson, Jieyon Choi, Kevin M Brown, Laufey T Amundadottir
Journal: Cancer Research
Cancer Res (2024) 84 (17_Supplement_2): C055.
https://doi.org/10.1158/1538-7445.PANCREATIC24-C055
Published: 15 September 2024
View articletitled, Abstract C055: Unraveling pancreatic cancer susceptibility at 5p15.33: Functional characterization of a novel VNTR element
Journal Articles

Abstract 7082: Epidemiology meets epitranscriptomics: Exploring the cancer-related role of a novel TERT-antisense transcript and its regulation by RNA methylation

Brenen W. Papenberg, Oscar Florez-Vargas, Michelle Ho, Kaitlin Forsythe, Chi Zhang, Chia-Han Lee, Sam Mbulaiteye, Pedro J. Batista, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 7082.
https://doi.org/10.1158/1538-7445.AM2024-7082
Published: 22 March 2024
View articletitled, Abstract 7082: Epidemiology meets epitranscriptomics: Exploring the cancer-related role of a novel TERT-antisense transcript and its regulation by RNA methylation
Journal Articles

Abstract 1644: Exploring the role of a TERT intronic tandem repeat in regulating cell proliferative responses to environmental factors and cancer risk

Michelle Ho, Oscar Florez-Vargas, Maxwell Hogshead, Brenen Papenberg, Chia Han Lee, Chi Zhang, Kaitlin Forsythe, Wusheng Yan, Raj Chari, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 1644.
https://doi.org/10.1158/1538-7445.AM2024-1644
Published: 22 March 2024
View articletitled, Abstract 1644: Exploring the role of a TERT intronic tandem repeat in regulating cell proliferative responses to environmental factors and cancer risk
Journal Articles

Abstract 6144: A polymorphic TERT tandem repeat creating an expandable intronic G4 quadruplex is associated with TERT expression, relative leukocyte telomere length and cancer risk

Oscar Florez-Vargas, Michelle Ho, Max Hogshead, Chia-Han Lee, Kaitlin Forsythe, Brenen Papenberg, Kristine Jones, Wen Luo, Kedest Teshome, Cornelis Blauwendraat, Mikhail Kolmogorov, Stephen J. Chanock, Mitchell J. Machiela, John Schneekloth, Shahinaz Gadalla, Sharon A. Savage, Sam M. Mbulaiteye, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 6144.
https://doi.org/10.1158/1538-7445.AM2024-6144
Published: 22 March 2024
View articletitled, Abstract 6144: A polymorphic TERT tandem repeat creating an expandable intronic G4 quadruplex is associated with TERT expression, relative leukocyte telomere length and cancer risk
Journal Articles

Abstract 826: Large-scale genome-wide association study identifies multiple novel germline susceptibility variants associated with bladder cancer risk

Stella Koutros, Lambertus A. Kiemeney, Roger L. Milne, Yuanqing Ye, Vijai Joseph, Jonine Figueroa, Nilanjan Chatterjee, Graham G. Giles, Michelle A. Hildebrandt, Lars Dyrskjot, Kenneth Offit, Manolis Kogevinas, Elisabete Weiderpass, Marjorie L. McCullough, Neal D. Freedman, Demetrius Albanes, Charles Kooperberg, Victoria Cortessis, Margaret R. Karagas, Dalsu Baris, Alison Johnson, Molly R. Schwenn, Helena Furberg, Dean F. Bajorin, Parichoy Pal Choudhury, Oscar Florez-Vargas, Olivier Cussenot, Geraldine Cancel-Tassin, Simone Benhamou, Peter Kraft, Stefano Porru, Mark P. Purdue, Katherine A. McGlynn, Cari M. Kitahara, Christopher A. Haiman, Mark H. Greene, Thorunn Rafnar, Stephen J. Chanock, Xifeng Wu, Francisco X. Real, Debra T. Silverman, Montserrat Garcia-Closas, Kari Stefansson, Ludmila Prokunina-Olsson, Nuria Malats, Nathaniel Rothman
Journal: Cancer Research
Cancer Res (2021) 81 (13_Supplement): 826.
https://doi.org/10.1158/1538-7445.AM2021-826
Published: 01 July 2021
View articletitled, Abstract 826: Large-scale genome-wide association study identifies multiple novel germline susceptibility variants associated with bladder cancer risk
Journal Articles

Abstract 861: Diesel engine exhaust is associated with TP53 mutations and high-risk non-muscle invasive bladder cancer

Nicole Gonzalez, Nina Rao, Michael Dean, Ludmila Prokunina-Olsson, Dalsu Baris, Molly Schwenn, Alison Johnson, Nathaniel Rothman, Debra Silverman, Stella Koutros
Journal: Cancer Research
Cancer Res (2021) 81 (13_Supplement): 861.
https://doi.org/10.1158/1538-7445.AM2021-861
Published: 01 July 2021
View articletitled, Abstract 861: Diesel engine exhaust is associated with TP53 mutations and high-risk non-muscle invasive bladder cancer
Journal Articles

When the Smoke Clears m6A from a Y Chromosome–Linked lncRNA, Men Get an Increased Risk of Cancer

A. Rouf Banday, Brenen W. Papenberg, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2020) 80 (13): 2718–2719.
https://doi.org/10.1158/0008-5472.CAN-20-0961
Published: 02 July 2020
View articletitled, When the Smoke Clears m6A from a Y Chromosome–Linked lncRNA, Men Get an Increased Risk of Cancer
Open the PDF for When the Smoke Clears m6A from a Y Chromosome–Linked lncRNA, Men Get an Increased Risk of Cancer in another window
Journal Articles

It Takes Two (Genomes) to Cancer: Paired Viral and Host Transcriptome Analysis Provides New Insights about EBV Carcinogenicity

Sam M. Mbulaiteye, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2019) 79 (23): 5917–5919.
https://doi.org/10.1158/0008-5472.CAN-19-2996
Published: 02 December 2019
View articletitled, It Takes Two (Genomes) to Cancer: Paired Viral and Host Transcriptome Analysis Provides New Insights about EBV Carcinogenicity
Open the PDF for It Takes Two (Genomes) to Cancer: Paired Viral and Host Transcriptome Analysis Provides New Insights about EBV Carcinogenicity in another window
Journal Articles

Genetics Helps to Find Synergy for Immune Checkpoint and Targeted Combination Therapies

Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2019) 79 (21): 5476–5478.
https://doi.org/10.1158/0008-5472.CAN-19-2528
Published: 01 November 2019
View articletitled, Genetics Helps to Find Synergy for Immune Checkpoint and Targeted Combination Therapies
Open the PDF for Genetics Helps to Find Synergy for Immune Checkpoint and Targeted Combination Therapies in another window
Journal Articles

Abstract LB-051: Integrative, targeted deep sequencing of bladder tumors reveals novel associations between cancer gene mutations and mutational signatures with major risk factors

Stella Koutros, Nina Rao, Lee E. Moore, Michael L. Nickerson, Donghyuk Lee, Bin Zhu, Larissa Pardo, Dalsu Baris, Molly Schwenn, Alison Johnson, Kristine Jones, Montserrat Garcia-Closas, Ludmila Prokunina-Olsson, Debra T. Silverman, Nathaniel Rothman, Michael Dean
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): LB-051.
https://doi.org/10.1158/1538-7445.AM2019-LB-051
Published: 01 July 2019
View articletitled, Abstract LB-051: Integrative, targeted deep sequencing of bladder tumors reveals novel associations between cancer gene mutations and mutational signatures with major risk factors
Journal Articles

Abstract 1292: Germline genetic, molecular and environmental factors modulate APOBEC mutagenesis in human tumors

A. Rouf Banday, Ariunaa Bayanjargal, Krizia-Ivana Udquim, Olusegun O Onabajo, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 1292.
https://doi.org/10.1158/1538-7445.AM2017-1292
Published: 01 July 2017
View articletitled, Abstract 1292: Germline genetic, molecular and environmental factors modulate APOBEC mutagenesis in human tumors
Journal Articles

Abstract 598: APOBEC mutagenesis: a link between innate immunity and cancer

A Rouf Banday, Olusegun O. Onabajo, Krizia-Ivana Udquim, Adeola Obajemu, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 598.
https://doi.org/10.1158/1538-7445.AM2017-598
Published: 01 July 2017
View articletitled, Abstract 598: APOBEC mutagenesis: a link between innate immunity and cancer
Journal Articles

Abstract 4419: Exploration of alternative pathways mediated by IFNL4 and related to cell proliferation and death in a hepatoma cell line

Fang Wang, Olusegun O. Onabajo, Nina Rao, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 4419.
https://doi.org/10.1158/1538-7445.AM2016-4419
Published: 15 July 2016
View articletitled, Abstract 4419: Exploration of alternative pathways mediated by IFNL4 and related to cell proliferation and death in a hepatoma cell line
Journal Articles

Abstract 2563: Analysis of a novel gene in relation to bladder cancer GWAS signals within the 20p12.2 region

Rouf Banday, Wusheng Yan, Candace D. Middlebrooks, Eniko Kiss, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 2563.
https://doi.org/10.1158/1538-7445.AM2016-2563
Published: 15 July 2016
View articletitled, Abstract 2563: Analysis of a novel gene in relation to bladder cancer GWAS signals within the 20p12.2 region
Journal Articles

Abstract 2562: Bladder cancer GWAS signal at 4p16.3 affects response of TMEM129 to chemically-induced endoplasmic reticulum stress

A. Rouf Banday, Eniko Kiss, Wusheng Yan, Candace Middlebrooks, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 2562.
https://doi.org/10.1158/1538-7445.AM2016-2562
Published: 15 July 2016
View articletitled, Abstract 2562: Bladder cancer GWAS signal at 4p16.3 affects response of TMEM129 to chemically-induced endoplasmic reticulum stress
Journal Articles

Abstract 4617: An alternatively spliced isoform of TMEM129 shows association with bladder cancer GWAS marker rs798766

A. Rouf Banday, Ashley Paquin, Candace Middlebrooks, Eniko Kiss, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 4617.
https://doi.org/10.1158/1538-7445.AM2015-4617
Published: 01 August 2015
View articletitled, Abstract 4617: An alternatively spliced isoform of TMEM129 shows association with bladder cancer GWAS marker rs798766
Journal Articles

The 19q12 Bladder Cancer GWAS Signal: Association with Cyclin E Function and Aggressive Disease

Yi-Ping Fu, Indu Kohaar, Lee E. Moore, Petra Lenz, Jonine D. Figueroa, Wei Tang, Patricia Porter-Gill, Nilanjan Chatterjee, Alexandra Scott-Johnson, Montserrat Garcia-Closas, Brian Muchmore, Dalsu Baris, Ashley Paquin, Kris Ylaya, Molly Schwenn, Andrea B. Apolo, Margaret R. Karagas, McAnthony Tarway, Alison Johnson, Adam Mumy, Alan Schned, Liliana Guedez, Michael A. Jones, Masatoshi Kida, GM Monawar Hosain, Nuria Malats, Manolis Kogevinas, Adonina Tardon, Consol Serra, Alfredo Carrato, Reina Garcia-Closas, Josep Lloreta, Xifeng Wu, Mark Purdue, Gerald L. Andriole, Jr, Robert L. Grubb, III, Amanda Black, Maria T. Landi, Neil E. Caporaso, Paolo Vineis, Afshan Siddiq, H. Bas Bueno-de-Mesquita, Dimitrios Trichopoulos, Börje Ljungberg, Gianluca Severi, Elisabete Weiderpass, Vittorio Krogh, Miren Dorronsoro, Ruth C. Travis, Anne Tjønneland, Paul Brennan, Jenny Chang-Claude, Elio Riboli, Jennifer Prescott, Constance Chen, Immaculata De Vivo, Edward Govannucci, David Hunter, Peter Kraft, Sara Lindstrom, Susan M. Gapstur, Eric J. Jacobs, W. Ryan Diver, Demetrius Albanes, Stephanie J. Weinstein, Jarmo Virtamo, Charles Kooperberg, Chancellor Hohensee, Rebecca J. Rodabough, Victoria K. Cortessis, David V. Conti, Manuela Gago-Dominguez, Mariana C. Stern, Malcolm C. Pike, David Van Den Berg, Jian-Min Yuan, Christopher A. Haiman, Olivier Cussenot, Geraldine Cancel-Tassin, Morgan Roupret, Eva Comperat, Stefano Porru, Angela Carta, Sofia Pavanello, Cecilia Arici, Giuseppe Mastrangelo, H. Barton Grossman, Zhaoming Wang, Xiang Deng, Charles C. Chung, Amy Hutchinson, Laurie Burdette, William Wheeler, Joseph Fraumeni, Jr, Stephen J. Chanock, Stephen M. Hewitt, Debra T. Silverman, Nathaniel Rothman, Ludmila Prokunina-Olsson
Journal: Cancer Research
Series: Author Choice
Cancer Res (2014) 74 (20): 5808–5818.
https://doi.org/10.1158/0008-5472.CAN-14-1531
Published: 14 October 2014
View articletitled, The 19q12 Bladder Cancer GWAS Signal: Association with Cyclin E Function and Aggressive Disease
Open the PDF for The 19q12 Bladder Cancer GWAS Signal: Association with Cyclin E Function and Aggressive Disease in another window
Includes: Supplementary data
Journal Articles

Abstract 944: Translational implications of the 19q12 bladder cancer GWAS signal for aggressive bladder cancer

Yi-Ping Fu, Indu Kohaar, Lee Moore, Petra Lenz, Jonine D. Figueroa, Wei Tang, Patricia Porter-Gill, Stephen Chanock, Stephen M. Hewitt, Debra T. Silverman, Nathaniel Rothman, NCI-GWAS Bladder Cancer Consortium, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2014) 74 (19_Supplement): 944.
https://doi.org/10.1158/1538-7445.AM2014-944
Published: 01 October 2014
View articletitled, Abstract 944: Translational implications of the 19q12 bladder cancer GWAS signal for aggressive bladder cancer
Journal Articles

Common Genetic Polymorphisms Modify the Effect of Smoking on Absolute Risk of Bladder Cancer

Montserrat Garcia-Closas, Nathaniel Rothman, Jonine D. Figueroa, Ludmila Prokunina-Olsson, Summer S. Han, Dalsu Baris, Eric J. Jacobs, Nuria Malats, Immaculata De Vivo, Demetrius Albanes, Mark P. Purdue, Sapna Sharma, Yi-Ping Fu, Manolis Kogevinas, Zhaoming Wang, Wei Tang, Adonina Tardón, Consol Serra, Alfredo Carrato, Reina García-Closas, Josep Lloreta, Alison Johnson, Molly Schwenn, Margaret R. Karagas, Alan Schned, Gerald Andriole, Jr, Robert Grubb, III, Amanda Black, Susan M. Gapstur, Michael Thun, William Ryan Diver, Stephanie J. Weinstein, Jarmo Virtamo, David J. Hunter, Neil Caporaso, Maria Teresa Landi, Amy Hutchinson, Laurie Burdett, Kevin B. Jacobs, Meredith Yeager, Joseph F. Fraumeni, Jr, Stephen J. Chanock, Debra T. Silverman, Nilanjan Chatterjee
Journal: Cancer Research
Cancer Res (2013) 73 (7): 2211–2220.
https://doi.org/10.1158/0008-5472.CAN-12-2388
Published: 02 April 2013
View articletitled, Common Genetic Polymorphisms Modify the Effect of Smoking on Absolute Risk of Bladder Cancer
Open the PDF for Common Genetic Polymorphisms Modify the Effect of Smoking on Absolute Risk of Bladder Cancer in another window
Journal Articles

Abstract 1658: Post-GWAS genetic and functional studies for bladder cancer: An uncommon protective synonymous coding variant within the UGT1A6 gene explains the GWAS signal and affects cellular detoxification

Wei Tang, Yi-Ping Fu, Jonine D. Figueroa, Nuria Malats, Montserrat Garcia-Closas, Nilanjan Chatterjee, Manolis Kogevinas, Stephen J. Chanock, Debra T. Silverman, Nathaniel Rothman, Ludmila Prokunina-Olsson
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 1658.
https://doi.org/10.1158/1538-7445.AM2012-1658
Published: 15 April 2012
View articletitled, Abstract 1658: Post-GWAS genetic and functional studies for bladder cancer: An uncommon protective synonymous coding variant within the UGT1A6 gene explains the GWAS signal and affects cellular detoxification