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Levi Garraway
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Journal Articles

Abstract 5524: Persistent patient barriers to genomic testing in ambulatory oncology

Ellana K. Haakenstad, Jane Roberts, Anna C. Revette, Wendy Loeser, Joseph Grider, Andrea Kruse, Alissa Gentile, Rachel Freedman, Neal I. Lindeman, Olga Kozyreva, Pedro Sanz-Altamira, Christopher S. Lathan, Michael Hassett, Ethan Cerami, Annette S. Kim, Danielle K. Manning, Jonathan Nowak, Marios Giannakis, R Coleman Lindsley, William C. Hahn, Barrett J. Rollins, Levi Garraway, Bruce E. Johnson, Nadine Jackson McCleary
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 5524.
https://doi.org/10.1158/1538-7445.AM2023-5524
Published: 04 April 2023
View article titled, Abstract 5524: Persistent patient barriers to genomic testing in ambulatory oncology
Journal Articles

Abstract LB-113: MAPK pathway suppression unmasks latent DNA repair defects and confers a chemical synthetic vulnerability inBRAF,NRASandNF1-mutant melanomas

Ophélia Maertens, Ryan Kuzmickas, Haley Manchester, Chloe Emerson, Alessandra Gavin, Caroline Guild, Terence Wong, Thomas De Raedt, Christian Bowman-Colin, Elodie Hatchi, Levi Garraway, Keith Flaherty, Shailja Pathania, Stephen Elledge, Karen Cichowski
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): LB-113.
https://doi.org/10.1158/1538-7445.AM2019-LB-113
Published: 01 July 2019
View article titled, Abstract LB-113: MAPK pathway suppression unmasks latent DNA repair defects and confers a chemical synthetic vulnerability in<em>BRAF</em>,<em>NRAS</em>and<em>NF1-</em>mutant melanomas
Journal Articles

Abstract 1224: Deep targeted tumor sequencing of colorectal cancer cases to study associations of molecular subtypes with clinical, genetic, and lifestyle risk factors

Syed Zaidi, Amanda Phipps, Tabitha Harrison, Catherine Grasso, Robert Steinfelder, Quang Trinh, Charles Connolly, Barbara Banbury, Adilya Rafikova, Philipp Hofer, Stefanie Brezina, Marios Giannakis, Xinmeng Jasmine Mu, Michael Quist, Charles Fuchs, Levi Garraway, Li Hsu, Lincoln Stein, Andrea Gsur, Shuji Ogino, Steven Gallinger, Polly Newcomb, Peter Campbell, Wei Sun, Thomas Hudson, Ulrike Peters
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 1224.
https://doi.org/10.1158/1538-7445.AM2018-1224
Published: 01 July 2018
View article titled, Abstract 1224: Deep targeted tumor sequencing of colorectal cancer cases to study associations of molecular subtypes with clinical, genetic, and lifestyle risk factors
Journal Articles

Abstract 1286: Targeted deep sequencing of colorectal tumor tissues to study associations of tumor subtypes with germline genetic, lifestyle, and environmental risk factors

Syed H. Zaidi, Wei Sun, Jeroen Huyghe, Catherine S. Grasso, Quang Trinh, Charles Connolly, Amy French, Jasmine Mu, Marios Giannakis, Eve Shinbrot, Ivan Borozan, Michael J. Quist, Hermann Brenner, Daniel Buchanan, Peter Campbell, Andrew Chan, Jenny Chang-Claude, Vincent Ferretti, Charles Fuchs, Andrea Gsur, Marc Gunter, Tabitha Harrison, Michael Hoffmeister, Wen-Yi Huang, Paul Krzyzanowski, Stephen Lee, Mathieu Lemire, Jessica Miller, Danielle Pasternack, Cherie Teney, Elaine Mardis, Polly Newcomb, Lincoln Stein, Lee Timms, David Wheeler, Christina Yung, Niha Zubair, Levi Garraway, Shuji Ogino, Li Hsu, Steven Gallinger, Stephen Thibodeau, Thomas Hudson, Ulrike Peters
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 1286.
https://doi.org/10.1158/1538-7445.AM2017-1286
Published: 01 July 2017
View article titled, Abstract 1286: Targeted deep sequencing of colorectal tumor tissues to study associations of tumor subtypes with germline genetic, lifestyle, and environmental risk factors
Journal Articles

Abstract 1010: Genomic analysis of recurrent ovarian cancer in patient-derived xenografts treated with platinum and taxane chemotherapy

Elizabeth Stover, Ali Amin-Mansour, Sangeetha Palakurthi, Sanam Dharma, Qing Zeng, Shan Zhou, Palak Desai, Levi Garraway, Ursula Matulonis, Joyce Liu
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 1010.
https://doi.org/10.1158/1538-7445.AM2017-1010
Published: 01 July 2017
View article titled, Abstract 1010: Genomic analysis of recurrent ovarian cancer in patient-derived xenografts treated with platinum and taxane chemotherapy
Journal Articles

Abstract 1953: Accelerating prediction of pediatric and rare cancer vulnerabilities using next-generation cancer models

Yuen-Yi Tseng, Andrew Hong, Paula Keskula, Shubhroz Gill, Jaime Cheah, Grigoriy Kryukov, Aviad Tsherniak, Francisca Vazquez, Glenn Cowley, Sahar Alkhairy, Coyin Oh, Anson Peng, Rebecca Deasy, Abeer Sayeed, Peter Ronning, Samuel Ng, Steven Corsello, Corrie Painter, David Sandak, Levi Garraway, Mark Rubin, Calvin Kuo, Sidharth Puram, David Weinstock, Adam Bass, Nikhil Wagle, Keith Ligon, Katherine Janeway, David Root, Stuart Schreiber, Paul Clemons, Aly Shamji, Aly Shamji, William Hahn, Todd Golub, Jesse Boehm
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 1953.
https://doi.org/10.1158/1538-7445.AM2017-1953
Published: 01 July 2017
View article titled, Abstract 1953: Accelerating prediction of pediatric and rare cancer vulnerabilities using next-generation cancer models
Journal Articles

Abstract 3037: Dissecting treatment resistance in patients with ovarian cancer and PDX-models using single-cell RNA-sequencing

Benjamin Izar, Itay Tirosh, Elizabeth Stover, Asaf Rotem, Parin Shah, Mike Cuoco, Chris Rodman, Joyce Liu, Ursula Matulonis, Orit Rozenblatt-Rosen, Levi Garraway, Aviv Regev
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 3037.
https://doi.org/10.1158/1538-7445.AM2017-3037
Published: 01 July 2017
View article titled, Abstract 3037: Dissecting treatment resistance in patients with ovarian cancer and PDX-models using single-cell RNA-sequencing
Journal Articles

Abstract 1564: A computational framework for removing mouse contamination in tumors sequenced from patient-derived xenografts

Ali Amin-Mansour, Judit Jané-Valbuena, Xinmeng Jasmine Mu, Levi Garraway
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 1564.
https://doi.org/10.1158/1538-7445.AM2017-1564
Published: 01 July 2017
View article titled, Abstract 1564: A computational framework for removing mouse contamination in tumors sequenced from patient-derived xenografts
Journal Articles

Abstract 571: Meta-analysis of genomic predictors of response to immune checkpoint therapy in metastatic melanoma

Diana Miao, David Liu, Daniel Keliher, Sachet Shukla, Bastian Schilling, Claire Margolis, Alicia Smart, Levi Garraway, Stephen Hodi, Dirk Schadendorf, Eliezer M. Van Allen
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 571.
https://doi.org/10.1158/1538-7445.AM2017-571
Published: 01 July 2017
View article titled, Abstract 571: Meta-analysis of genomic predictors of response to immune checkpoint therapy in metastatic melanoma
Journal Articles

Abstract 136: Refining the molecular profile of colorectal tumors to expand prevention and treatment opportunities

Catherine S. Grasso, Eve Shinbrot, Ming Yu, Max Liesersen, Mark Chaisson, Andrew Chan, Charles Connolly, James Dai, Margaret Du, Charles Fuchs, Levi Garraway, Marios Giannakis, Tabitha Harrison, Li Hsu, Jeroen Huyghe, Jasmine Mu, Shuji Ogino, Colin Pritchard, Stephen Salipante, Wei Sun, Syed H. Zaidi, Ni Zhao, William Grady, Ben Raphael, Thomas Hudson, David Wheeler, Ulrike Peters
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 136.
https://doi.org/10.1158/1538-7445.AM2016-136
Published: 15 July 2016
View article titled, Abstract 136: Refining the molecular profile of colorectal tumors to expand prevention and treatment opportunities
Journal Articles

Abstract LB-227: Truncal activating MAPK and PI3K pathway alterations and exceptional response to dual pathway inhibition in anaplastic thyroid cancer

William J. Gibson, Daniel T. Ruan, Vera A. Paulson, Justine A. Barletta, Glenn J. Hanna, Stefan Kraft, Antonio Calles, Matthew Nehs, Francis Moore, Amaro Taylor-Weiner, Jeremiah Wala, Travis Zack, Thomas Lee, Fiona Fennessy, Erik Alexander, Tom Thomas, Pasi Jäne, Levi Garraway, Scott Carter, Rameen Beroukhim, Jochen Lorch, Eliezer Van Allen
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): LB-227.
https://doi.org/10.1158/1538-7445.AM2016-LB-227
Published: 15 July 2016
View article titled, Abstract LB-227: Truncal activating MAPK and PI3K pathway alterations and exceptional response to dual pathway inhibition in anaplastic thyroid cancer
Journal Articles

Abstract 5221: Linking the molecular profile of colorectal tumors to germline genetic and environmental risk factors

Syed H. Zaidi, Catie Grasso, Jasmine Mu, Eve Shinbrot, Marios Giannakis, Charles Connolly, Ivan Borozan, Hermann Brenner, Peter Campbell, Andrew Chan, Jenny Chang-Claude, Mengmeng Du, Vincent Ferretti, Amy French, Charles Fuchs, Steven Gallinger, Levi Garraway, Andrea Gsur, Marc Gunter, Tabitha Harrison, Michael Hoffmeister, Li Hsu, Wen-Yi Huang, Jeroen Huyghe, Mathieu Lemire, Elaine Mardis, John McPherson, Polly Newcomb, Lincoln Stein, Wei Sun, Lee Timms, Quang Trinh, David Wheeler, Christina Yung, Niha Zubair, Shuji Ogino, Stephen Thibodeau, Ulrike Peters, Thomas Hudson
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 5221.
https://doi.org/10.1158/1538-7445.AM2016-5221
Published: 15 July 2016
View article titled, Abstract 5221: Linking the molecular profile of colorectal tumors to germline genetic and environmental risk factors
Journal Articles

Abstract 237: Enrichment of AXL-high/ MITF-low melanoma cells in the presence of MAPK inhibitors in vitro

Ken Dutton-Regester, Levi Garraway
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 237.
https://doi.org/10.1158/1538-7445.AM2016-237
Published: 15 July 2016
View article titled, Abstract 237: Enrichment of AXL-high/ MITF-low melanoma cells in the presence of MAPK inhibitors <em>in vitro</em>
Journal Articles

Abstract 2150: Alternative treatment strategies to overcome MAPK inhibitor resistance in melanoma

Eva Goetz, Bokang Rabasha, Levi Garraway
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 2150.
https://doi.org/10.1158/1538-7445.AM2016-2150
Published: 15 July 2016
View article titled, Abstract 2150: Alternative treatment strategies to overcome MAPK inhibitor resistance in melanoma
Journal Articles

Abstract 4380: Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-sequencing

Benjamin Izar, Itay Tirsh, Sanjay Prakadan, Marc Wadsworth, Daniel Treacy, John Trombetta, Asaf Rotem, Christine Lian, George Murphy, Mohammad Fallahi-Sichani, Ken Dutton-Regester, Jia-Ren Lin, Judit Jane-Valbuena, Orit Rozenblatt-Rosen, Charles Yoon, Alex Shalek, Aviv Regev, Levi Garraway
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 4380.
https://doi.org/10.1158/1538-7445.AM2016-4380
Published: 15 July 2016
View article titled, Abstract 4380: Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-sequencing
Journal Articles

Abstract 4367: Accelerating prediction of tumor vulnerabilities using next-generation cancer models

Yuen-Yi Tseng, Andrew Hong, Paula Keskula, Shubhroz Gill, Jaime Cheah, Grigoriy Kryukov, Aviad Tsherniak, Francisca Vazquez, Glenn Cowley, Coyin Oh, Anson Peng, Abeer Sayeed, Rebecca Deasy, Peter Ronning, Philip Kantoff, Levi Garraway, Mark Rubin, Calvin Kuo, Sidharth Puram, Adi Gazdar, Filemon Dela Cruz, Adam Bass, Nikhil Wagle, Keith Ligon, Katherine Janeway, David Root, Stuart Schreiber, Paul Clemons, Aly Shamji, William Hahn, Todd Golub, Jesse S. Boehm
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 4367.
https://doi.org/10.1158/1538-7445.AM2016-4367
Published: 15 July 2016
View article titled, Abstract 4367: Accelerating prediction of tumor vulnerabilities using next-generation cancer models
Journal Articles

Abstract PR04: Genomic characterization of brain metastases reveals branched evolution and metastasis-specific mutations

Priscilla K. Brastianos, Scott L. Carter, Sandro Santagata, Daniel Cahill, Amaro Taylor-Weiner, Robert T. Jones, Eliezer Van Allen, Peleg Horowitz, Keith L. Ligon, William T. Curry, Ian F. Dunn, Paul Van Hummelen, Matthew Meyerson, Levi Garraway, Josep Tabernero, Joan Seoane, Stacey Gabriel, Eric S. Lander, Rameen Beroukhim, Tracy T. Batchelor, Jose Baselga, David N. Louis, William C. Hahn, Gad Getz
Journal: Cancer Research
Cancer Res (2015) 75 (23_Supplement): PR04.
https://doi.org/10.1158/1538-7445.BRAIN15-PR04
Published: 09 December 2015
View article titled, Abstract PR04: Genomic characterization of brain metastases reveals branched evolution and metastasis-specific mutations
Journal Articles

Abstract 4727: Genomic characterization of brain metastases reveals divergent evolution and metastasis specific mutations

Priscilla K. Brastianos, Scott L. Carter, Sandro Santagata, Amaro Taylor-Weiner, Robert T. Jones, Eli Van Allen, Keith L. Ligon, Josep Tabernero, Joan Seoane, Elena Martinez-Saez, Daniel Cahill, William T. Curry, Ian F. Dunn, Sun Ha Paek, Paul Van Hummelen, Aaron R. Thorner, Bruce E. Johnson, Nancy U. Lin, Toni K. Choueiri, Michael S. Rabin, Rameen Beroukhim, Anat Stemmer-Rachamimov, Matthew Meyerson, Levi Garraway, Tracy Batchelor, Jose Baselga, David N. Louis, William C. Hahn, Gad Getz
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 4727.
https://doi.org/10.1158/1538-7445.AM2015-4727
Published: 01 August 2015
View article titled, Abstract 4727: Genomic characterization of brain metastases reveals divergent evolution and metastasis specific mutations
Journal Articles

Abstract LB-018: Defining a molecular subclass of treatment-resistant prostate cancer

Himisha Beltran, Davide Prandi, Juan Miguel Mosquera, Eugenia Giannopoulou, Loredana Puca, Clarisse Marotz, David M. Nanus, Scott T. Tagawa, Olivier Elemento, Eliezer Van Allen, Andrea Sboner, Levi Garraway, Mark A. Rubin, Francesca Demichelis
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): LB-018.
https://doi.org/10.1158/1538-7445.AM2015-LB-018
Published: 01 August 2015
View article titled, Abstract LB-018: Defining a molecular subclass of treatment-resistant prostate cancer
Journal Articles

Abstract 957: Towards precision functional genomics via next-generation functional mapping of cancer variants

Alice Berger, Eejung Kim, Angela Brooks, Yashaswi Shrestha, Yuen-Yi Tseng, Xiaoyun Wu, Nina Ilic, Lihua Zou, Atanas Kamburov, Xiaoping Yang, Cong Zhu, Paula Keskula, Sara Seepo, Andrew Hong, John Doench, Aravind Subramanian, Keith Ligon, Philip Kantoff, Katherine Janeway, Levi Garraway, David Root, Todd Golub, Matthew Meyerson, William Hahn, Gad Getz, Jesse Boehm
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 957.
https://doi.org/10.1158/1538-7445.AM2015-957
Published: 01 August 2015
View article titled, Abstract 957: Towards precision functional genomics via next-generation functional mapping of cancer variants