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Junya Fujimoto
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Journal Articles

Abstract 1202: A repository of PDX histology images for exploring spatial heterogeneity and cancer dynamics

Brian S. White, Xingyi Woo, Soner Koc, Todd Sheridan, Steven B. Neuhauser, Akshat M. Savaliya, Lacey E. Dobrolecki, John D. Landua, Matthew H. Bailey, Maihi Fujita, Kurt W. Evans, Bingliang Fang, Junya Fujimoto, Maria Gabriela Raso, Shidan Wang, Guanghua Xiao, Yang Xie, Sherri R. Davies, Ryan C. Fields, R Jay Mashl, Jacqueline L. Mudd, Yeqing Chen, Min Xiao, Xiaowei Xu, Melinda G. Hollingshead, Shahanawaz Jiwani, PDXNet Consortium, Yvonne A. Evrard, Tiffany A. Wallace, Jeffrey A. Moscow, James H. Doroshow, Nicholas Mitsiades, Salma Kaochar, Chong-xian Pan, Moon S. Chen, Luis G. Carvajal-Carmona, Alana L. Welm, Bryan E. Welm, Michael T. Lewis, Ramaswamy Govindan, Li Ding, Shunqiang Li, Meenhard Herlyn, Michael A. Davies, Jack A. Roth, Funda Meric-Bernstam, Carol J. Bult, Brandi Davis-Dusenbery, Dennis A. Dean, Jeffrey H. Chuang
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 1202.
DOI: https://doi.org/10.1158/1538-7445.AM2022-1202
Published: 15 June 2022
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Journal Articles

Abstract 5305: Delta-like ligand 3 immunohistochemical expression landscape in high-grade lung neuroendocrine tumors

Cibelle F. Lima, Pedro S. Rocha, Junya Fujimoto, Allison Stewart, Robert Cardnell, Wei Lu, Khaja Khan, Beate Sable, Aaron R. Ellison, Ignacio I. Wistuba, Carl M. Gay, Neda Kalhor, Lauren A. Byers, Luisa M. Solis-Soto
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 5305.
DOI: https://doi.org/10.1158/1538-7445.AM2022-5305
Published: 15 June 2022
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Journal Articles

Abstract 2126: Single-cell sequencing of early-stage lung adenocarcinomas reveals prominent intratumoral heterogeneity and epithelial plasticity programs

Guangchun Han, Ansam Sinjab, Warapen Treekitkarnmongkol, Dapeng Hao, Enyu Dai, Luisa M. Solis, Edwin R. Parra, Stephen Swisher, Tina Cascone, Boris Sepesi, Jichao Chen, Steven Dubinett, Junya Fujimoto, Ignacio I. Wistuba, Christopher S. Stevenson, Avrum E. Spira, Linghua Wang, Humam Kadara
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 2126.
DOI: https://doi.org/10.1158/1538-7445.AM2022-2126
Published: 15 June 2022
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Journal Articles

Abstract 223: Chronic exposure to waterpipe smoke elicits immunomodulatory and carcinogenic effects in the lung

Zahraa Rahal, Maya Hassane, Nareg Karaoghlanian, Jiexin Zhang, Ansam Sinjab, J. Jack Lee, Maria Gabriela Raso, Junya Fujimoto, Hassan Chami, Alan Shihadeh, Humam Kadara
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 223.
DOI: https://doi.org/10.1158/1538-7445.AM2022-223
Published: 15 June 2022
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Journal Articles

Abstract 4077: Immune suppressive phenotypes and pre-existing bystander T cell repertoire in early-stage lung adenocarcinoma revealed by integrative single-cell profiling

Guangchun Han, Ansam Sinjab, Dapeng Hao, Lorena Gomez Bolanos, Enyu Dai, Luisa Maren Solis, Edwin Parra, Stephen Swisher, Tina Cascone, Boris Sepesi, Junya Fujimoto, Steven Dubinett, Ignacio Wistuba, Christopher Stevenson, Avrum Spira, Humam Kadara, Linghua Wang
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 4077.
DOI: https://doi.org/10.1158/1538-7445.AM2022-4077
Published: 15 June 2022
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Journal Articles

Abstract 6148: Immunogenomic landscape of tumor-infiltrating B and plasma cells in early-stage lung adenocarcinoma

Dapeng Hao, Guangchun Han, Ansam Sinjab, Lorena Gomez Bolanos, Rossana Lazcano Segura, Enyu Dai, Luisa Maren Solis Soto, Edwin Parra, Jennifer Wargo, Stephen Swisher, Tina Cascone, Boris Sepesi, Junya Fujimoto, Steven Dubinett, Ignacio Wistuba, Christopher Stevenson, Avrum Spira, Humam Kadara, Linghua Wang
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 6148.
DOI: https://doi.org/10.1158/1538-7445.AM2022-6148
Published: 15 June 2022
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Journal Articles

Abstract 6152: Distinct immune gene programs associated with host tumor immunity, neoadjuvant chemotherapy and chemoimmunotherapy in resectable NSCLC

Pedro Rocha, Jiexin Zhang, Raquel Laza-Briviesca, Alberto Cruz-Bermúdez, Katsuhiro Yoshimura, Carmen Behrens, Apar Pataer, Edwin Parra-Cuentas, Cara Haymaker, Junya Fujimoto, Stephen Swisher, John Heymach, Don L. Gibbons, J Jack Lee, Boris Sepesi, Tina Cascone, Luisa M. Solis, Mariano Provencio, Ignacio I. Wistuba, Humam Kadara
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 6152.
DOI: https://doi.org/10.1158/1538-7445.AM2022-6152
Published: 15 June 2022
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Journal Articles

Abstract 1586: An emerging role for inflammation-associated alveolar intermediate cells in early phenotypic development of KRAS-mutant lung adenocarcinoma

Ansam Sinjab, Guangchun Han, Warapen Treekitkarnmongkol, Dapeng Hao, Enyu Dai, Luisa M. Solis, Seyed Javad Moghaddam, Junya Fujimoto, Jichao Chen, Matthew Edwards, Christopher S. Stevenson, Avrum E. Spira, Linghua Wang, Humam Kadara
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 1586.
DOI: https://doi.org/10.1158/1538-7445.AM2022-1586
Published: 15 June 2022
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Journal Articles

Abstract PR006: An emerging role for inflammation-associated alveolar intermediate cells in early phenotypic development of KRAS-mutant lung adenocarcinoma

Ansam Sinjab, Guangchun Han, Warapen Treekitkarnmongkol, Dapeng Hao, Enyu Dai, Luisa M Solis, Seyed Javad Moghaddam, Junya Fujimoto, Jichao Chen, Matthew Edwards, Christopher S. Stevenson, Avrum E. Spira, Linghua Wang, Humam Kadara
Journal: Cancer Research
Cancer Res (2022) 82 (10_Supplement): PR006.
DOI: https://doi.org/10.1158/1538-7445.EVODYN22-PR006
Published: 15 May 2022
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Journal Articles

Abstract 619: Integrated multi-platform profiling of early-stage non-small cell lung cancer identifies relationship between disease recurrence and decreased native immune response in treatment-naïve resected NSCLC

Neal Akhave, Stephanie Schmidt, Alexandre Reuben, Tina Cascone, Jianhua Zhang, Jun Li, Junya Fujimoto, Lauren A. Byers, Beatriz Sanchez-Espiridion, Lixia Diao, Jing Wang, Lorenzo Federico, Marie-Andree Forget, Daniel J. McGrail, Annikka Weissferdt, Shiaw-Yih Lin, Younghee Lee, Carmen Behrens, Ignacio I. Wistuba, Andrew Futreal, Ara Vaporciyan, Boris Sepesi, John V. Heymach, Chantale Bernatchez, Cara Haymaker, Jianjun Zhang, Christopher A. Bristow, Marcelo V. Negrao, Don L. Gibbons
Journal: Cancer Research
Cancer Res (2021) 81 (13_Supplement): 619.
DOI: https://doi.org/10.1158/1538-7445.AM2021-619
Published: 01 July 2021
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Journal Articles

Abstract 702: Single-cell expression landscape of SARS-CoV-2 receptor ACE2 and host proteases in human lung adenocarcinoma

Guangchun Han, Ansam Sinjab, Kieko Hara, Warapen Treekitkarnmongkol, Patrick Brennan, Kyle Chang, Elena Bokatenkova, Beatriz Sanchez-Espiridion, Carmen Behrens, Luisa M. Solis, Boning Gao, Luc Girard, Jianjun Zhang, Boris Sepesi, Tina Cascone, Lauren A. Byers, Don L. Gibbons, Jichao Chen, Seyed Javad Moghaddam, Edwin J. Ostrin, Paul Scheet, Junya Fujimoto, Jerry Shay, John V. Heymach, John D. Minna, Steven Dubinett, Ignacio I. Wistuba, Christopher S. Stevenson, Avrum E. Spira, Linghua Wang, Humam Kadara
Journal: Cancer Research
Cancer Res (2021) 81 (13_Supplement): 702.
DOI: https://doi.org/10.1158/1538-7445.AM2021-702
Published: 01 July 2021
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Journal Articles

Abstract 384: Detection of DNA replication blocker SLFN11 in tumor tissue and circulating tumor cells to predict platinum response in small cell lung cancer

Bingnan Zhang, C. Allison Stewart, Carl M. Gay, Qi Wang, Robert Cardnell, Junya Fujimoto, Luisa Fernandez, Adam Jendrisak, Cole Gilbertson, Joseph Schonhoft, Joshua Jones, Amanda K. Anderson, Ignacio I. Wistuba, Jing Wang, Rick Wenstrup, Lauren A. Byers
Journal: Cancer Research
Cancer Res (2021) 81 (13_Supplement): 384.
DOI: https://doi.org/10.1158/1538-7445.AM2021-384
Published: 01 July 2021
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Journal Articles

Abstract 22: A novel, inflamed small cell lung cancer transcriptional subtype, SCLC-I, defines a subset of patients with distinct immunotherapy vulnerability

Carl M. Gay, C. Allison Stewart, Lixia Diao, Barzin Y. Nabet, Junya Fujimoto, Luisa M. Solis, Wei Lu, Yuanxin Xi, Robert J. Cardnell, Natalie I. Vokes, Kavya Ramkumar, Stephen G. Swisher, Jack A. Roth, Bonnie S. Glisson, David S. Shames, Ignacio I. Wistuba, Jing Wang, John Minna, John V. Heymach, Lauren A. Byers
Journal: Cancer Research
Cancer Res (2021) 81 (13_Supplement): 22.
DOI: https://doi.org/10.1158/1538-7445.AM2021-22
Published: 01 July 2021
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Journal Articles

Abstract 130: Resolving the spatial and cellular architecture of lung adenocarcinoma by multi-region single-cell sequencing

Ansam Sinjab, Guangchun Han, Warapen Treekitkarnmongkol, Kieko Hara, Patrick Brennan, Minghao Dang, Dapeng Hao, Ruiping Wang, Enyu Dai, Hitoshi Dejima, Jiexin Zhang, Elena Bogatenkova, Beatriz Sanchez-Espiridion, Kyle Chang, Danielle R. Little, Samer Bazzi, Linh Tran, Kostyantyn Krysan, Carmen Behrens, Dzifa Duose, Edwin R. Parra, Maria Gabriela Raso, Luisa M. Solis, Junya Fukuoka, Jianjun Zhang, Boris Sepesi, Tina Cascone, Lauren A. Byers, Don L. Gibbons, Jichao Chen, Seyed Javad Moghaddam, Edwin J. Ostrin, Daniel G. Rosen, John V. Heymach, Paul Scheet, Steven Dubinett, Ignacio I. Wistuba, Junya Fujimoto, Christopher S. Stevenson, Avrum E. Spira, Linghua Wang, Humam Kadara
Journal: Cancer Research
Cancer Res (2021) 81 (13_Supplement): 130.
DOI: https://doi.org/10.1158/1538-7445.AM2021-130
Published: 01 July 2021
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Journal Articles

Abstract 1906: Relationship between neuroendocrine and immune gene expression in small cell lung cancer

Ling Cai, Hongyu Liu, Fang Huang, Junya Fujimoto, Luc Girard, Yang Xie, John Minna, Adi Gazdar
Journal: Cancer Research
Cancer Res (2021) 81 (13_Supplement): 1906.
DOI: https://doi.org/10.1158/1538-7445.AM2021-1906
Published: 01 July 2021
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Journal Articles

Abstract 1518: A single-cell transcriptomic atlas of lung adenocarcinoma and adjacent normal-appearing tissue

Ansam Sinjab, Guangchun Han, Warapen Treekitkarnmongkol, Patrick Brennan, Kieko Hara, Kyle Chang, Elena Bogatenkova, Beatriz Sanchez-Espiridion, Carmen Behrens, Jianjun Zhang, Boris Sepesi, Tina Cascone, Don L. Gibbons, Jichao Chen, George Eapen, Edwin J. Ostrin, Junya Fujimoto, Avrum E. Spira, Paul A. Scheet, Ignacio I. Wistuba, Linghua Wang, Humam Kadara
Journal: Cancer Research
Cancer Res (2020) 80 (16_Supplement): 1518.
DOI: https://doi.org/10.1158/1538-7445.AM2020-1518
Published: 15 August 2020
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Journal Articles

Abstract 1496: Paired, single-cell profiling of circulating tumor cell-derived xenograft models of small cell lung cancer reveals intratumoral heterogeneity and emergence of new cell clusters following treatment relapse

C. Allison Stewart, Carl M. Gay, Yuanxin Xi, Santhosh Sivajothi, Junya Fujimoto, Patrice M. Hartsfield, Hai Tran, Stephen G. Swisher, Jack A. Roth, Jianjun Zhang, Bonnie Glisson, John V. Heymach, Ignacio Wistuba, Paul Robson, Jing Wang, Lauren A. Byers
Journal: Cancer Research
Cancer Res (2020) 80 (16_Supplement): 1496.
DOI: https://doi.org/10.1158/1538-7445.AM2020-1496
Published: 15 August 2020
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Journal Articles

Abstract 3349: Evolution of the gut Amicrobiome during the pathogenesis of smoking-associated Kras-mutant lung cancer

Warapen Treekitkarnmongkol, Casey Finnicum, Ansam Sinjab, Maya Hassane, Christel Davis, Gareth E. Davies, Kristi L. Hoffman, Junya Fujimoto, Florencia McAllister, Boris Sepesi, Tina Cascone, Robert R. Jenq, Joseph Petrosino, Erik Ehli, Seyed J. Moghaddam, Humam Kadara
Journal: Cancer Research
Cancer Res (2020) 80 (16_Supplement): 3349.
DOI: https://doi.org/10.1158/1538-7445.AM2020-3349
Published: 15 August 2020
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Journal Articles

Abstract 399: Tertiary lymphoid structures features associate with outcome in non-small cell lung carcinoma

Rossana Natalia Lazcano Segura, Andre Catao, Luisa M. Solis, Mei Jiang, Auriole Tamegnon, Junya Fujimoto, Jaime Rodriguez-Canales, Chi-Wan B. Chow, Carmen Behrens, Neda Kalhor, Annika Weissferdt, John Heymach, Stephen Swisher, Boris Sepesi, Jack Lee, Cesar Moran, Andrew Futreal, Jianjun Zhang, Edwin R. Parra, Ignacio I. Wistuba, Michael T. Tetzlaff, Alejandro Francisco-Cruz
Journal: Cancer Research
Cancer Res (2020) 80 (16_Supplement): 399.
DOI: https://doi.org/10.1158/1538-7445.AM2020-399
Published: 15 August 2020
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Journal Articles

Computational Staining of Pathology Images to Study the Tumor Microenvironment in Lung Cancer

Shidan Wang, Ruichen Rong, Donghan M. Yang, Junya Fujimoto, Shirley Yan, Ling Cai, Lin Yang, Danni Luo, Carmen Behrens, Edwin R. Parra, Bo Yao, Lin Xu, Tao Wang, Xiaowei Zhan, Ignacio I. Wistuba, John Minna, Yang Xie, Guanghua Xiao
Journal: Cancer Research
Cancer Res (2020) 80 (10): 2056–2066.
DOI: https://doi.org/10.1158/0008-5472.CAN-19-1629
Published: 15 May 2020
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Includes: Supplementary data