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Jeffrey Marks
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Journal Articles

Abstract 3353: Predicting the prognosis of ductal carcinoma in situ through chemical analysis of breast microcalcifications and soft tissue using infrared and Raman spectroscopy

Free
Jayakrupakar Nallala, Doriana Calabrese, Sarah Gosling, Esther Lips, Ihssane Bouybayoune, Rachel Factor, Sarah Pinder, Lorraine King, Jeffrey Marks, Thomas Lynch, Donna Pinto, Alastair Thompson, Elinor Sawyer, Jelle Wesseling, Shelley Hwang, Keith Rogers, Nick Stone, Grand Challenge PRECISION consortium
Journal: Cancer Research
Cancer Res (2025) 85 (8_Supplement_1): 3353.
https://doi.org/10.1158/1538-7445.AM2025-3353
Published: 21 April 2025
View articletitled, Abstract 3353: Predicting the prognosis of ductal carcinoma in situ through chemical analysis of breast microcalcifications and soft tissue using infrared and Raman spectroscopy
Journal Articles

Abstract PO4-13-04: Added Value from Patient Advocates in a Translational Working Group: the COMET Study

Free
Deborah Collyar, Desiree Basila, Thomas Lynch, Stuart Schnitt, Jeffrey Marks, Siri Strand, Terry Hyslop, Sunil Badve, Mark Watson, H. T. Carisa Le-Petross, Lars Grimm, Robert West, Anna Weiss, Anna Rapperport, Lorraine King, Rachel Factor, Marc Ryser, Ann Partridge, E Shelley Hwang, Alastair Thompson
Journal: Cancer Research
Cancer Res (2024) 84 (9_Supplement): PO4-13-04.
https://doi.org/10.1158/1538-7445.SABCS23-PO4-13-04
Published: 02 May 2024
View articletitled, Abstract PO4-13-04: Added Value from Patient Advocates in a Translational Working Group: the COMET Study
Journal Articles

Abstract 6929: Inter- and intratumoral PIK3CA subclonal diversity in breast cancer contextualized by single-cell multiomics

Free
Jon Zawistowski, Isai Salas-Gonzalez, Tia Tate, Tatiana Morozova, Katherine Kennedy, Durga Arvapalli, Jamie Remington, Jeffrey Marks, E. Shelley Hwang, Gary Harton, Victor Weigman, Jay A. West
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 6929.
https://doi.org/10.1158/1538-7445.AM2024-6929
Published: 22 March 2024
View articletitled, Abstract 6929: Inter- and intratumoral PIK3CA subclonal diversity in breast cancer contextualized by single-cell multiomics
Journal Articles

Abstract 3506: High-grade serous ovarian cancer somatic mutational signatures in Black and White individuals

Free
Katherine A. Lawson-Michod, David Nix, Lindsay Collin, Natalie Davidson, Ariel Hippen, Chad Huff, Aaron Atkinson, Lucas A. Salas, Lauren Peres, Casey Greene, Joellen Schildkraut, Jeffrey Marks, Jennifer A. Doherty
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 3506.
https://doi.org/10.1158/1538-7445.AM2023-3506
Published: 04 April 2023
View articletitled, Abstract 3506: High-grade serous ovarian cancer somatic mutational signatures in Black and White individuals
Journal Articles

Abstract 5561: Molecular imaging of calcification and soft tissue defines prognosis of DCIS to invasive breast cancer

Free
Jayakrupakar Nallala, Doriana Calabrese, Sarah Gosling, Esther Lips, Rachel Factor, Allison Hall, Sarah Pinder, Ihssane Bouybayoune, Elinor Sawyer, Lorraine King, Jeffrey Marks, Thomas Lynch, Donna Pinto, Jelle Wesseling, Shelley Hwang, Keith Rogers, Nick Stone, Grand Challenge PRECISION consortium
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 5561.
https://doi.org/10.1158/1538-7445.AM2023-5561
Published: 04 April 2023
View articletitled, Abstract 5561: Molecular imaging of calcification and soft tissue defines prognosis of DCIS to invasive breast cancer
Journal Articles

Abstract 125: Archival single cell sequencing reveals persistent subclones over years to decades of DCIS progression

Free
Kaile Wang, Tapsi Kumar, Junke wang, Darlan Minussi, Emi Sei, Jianzhuo li, Tuan Tran, Aatish Thennavan, Min Hu, Anna Casasent, Zhenna Xiao, Shanshan Bai, Yuehui Zhao, Amado Zurita, Ana Aparicio, Brian Chapin, Jie ye, Jianjun Zhang, Don Gibbons, Andrew Futreal, Lorraine King, Jeffrey Marks, E. Shelley Hwang, Vandna Shah, Ellinor Sawyer, Petra Kristel, Jelle Wesseling, Esther H. Lips, Nicholas Navin
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 125.
https://doi.org/10.1158/1538-7445.AM2023-125
Published: 04 April 2023
View articletitled, Abstract 125: Archival single cell sequencing reveals persistent subclones over years to decades of DCIS progression
Journal Articles

Abstract P2-21-03: Unique Collagen Peptide Signatures between Ductal Carcinoma in Situ and Invasive Breast Cancer by Mass Spectrometry Tissue Imaging

Free
Taylor S. Hulahan, Elizabeth N. Wallace, Siri H. Strand, Graham A. Colditz, E Shelley Hwang, Robert West, Laura Spruill, Jeffrey Marks, Richard R. Drake, Peggi M. Angel
Journal: Cancer Research
Cancer Res (2023) 83 (5_Supplement): P2-21-03.
https://doi.org/10.1158/1538-7445.SABCS22-P2-21-03
Published: 01 March 2023
View articletitled, Abstract P2-21-03: Unique Collagen Peptide Signatures between Ductal Carcinoma in Situ and Invasive Breast Cancer by Mass Spectrometry Tissue Imaging
Journal Articles

Abstract P1-07-02: Using clinical characteristics and molecular markers to predict the risk of subsequent ipsilateral breast events after excision of DCIS

Free
Ying Liu, Siri H. Strand, Lorraine King, Bryan Harmon, Fergus J. Couch, Kristalyn Gallagher, Mark Kilgore, Shi Wei, Angela DeMichele, Tari King, Priscilla F. McAuliffe, Jeffrey Marks, Carlo Maley, Robert West, E Shelley Hwang, Graham A. Colditz
Journal: Cancer Research
Cancer Res (2023) 83 (5_Supplement): P1-07-02.
https://doi.org/10.1158/1538-7445.SABCS22-P1-07-02
Published: 01 March 2023
View articletitled, Abstract P1-07-02: Using clinical characteristics and molecular markers to predict the risk of subsequent ipsilateral breast events after excision of DCIS
Journal Articles

Abstract P6-04-13: Centralized adequacy assessment of ductal carcinoma in situ samples for the COMET study (AFT-25)

Free
Rachel Factor, Stuart Schnitt, Robert West, Terry Hyslop, Thomas Lynch, Deborah Collyar, Desiree Basila, Lars Grimm, Lorraine King, Jeffrey Marks, Sunil Badve, Mark Watson, Marc Ryser, Anna Weiss, Anna Rapperport, Linda McCall, H. T. Carisa Le-Petross, Ann Partridge, E Shelley Hwang, Alastair M. Thompson
Journal: Cancer Research
Cancer Res (2023) 83 (5_Supplement): P6-04-13.
https://doi.org/10.1158/1538-7445.SABCS22-P6-04-13
Published: 01 March 2023
View articletitled, Abstract P6-04-13: Centralized adequacy assessment of ductal carcinoma in situ samples for the COMET study (AFT-25)
Journal Articles

Abstract P4-02-22: Breast microcalcification chemistry predicts DCIS prognosis

Free
Jayakrupakar Nallala, Doriana Calabrese, Sarah Gosling, Esther Lips, Rachel Factor, Allison Hall, Sarah E. Pinder, Ihssane Bouybayoune, Lorraine King, Jeffrey Marks, Thomas Lynch, Donna Pinto, Jelle Wesseling, E Shelley Hwang, Keith Rogers, Nick Stone
Journal: Cancer Research
Cancer Res (2023) 83 (5_Supplement): P4-02-22.
https://doi.org/10.1158/1538-7445.SABCS22-P4-02-22
Published: 01 March 2023
View articletitled, Abstract P4-02-22: Breast microcalcification chemistry predicts DCIS prognosis
Journal Articles

Abstract 3380: Seven autoantibody panel, validated in two independent patient serum collections, can detect women with DCIS and invasive breast cancer

Free
Sasha Elizabeth Stanton, Jason Schlumbohm, Erik Ramos, Charles Drescher, Jeffrey Marks, Mary L. Disis
Journal: Cancer Research
Cancer Res (2022) 82 (12_Supplement): 3380.
https://doi.org/10.1158/1538-7445.AM2022-3380
Published: 15 June 2022
View articletitled, Abstract 3380: Seven autoantibody panel, validated in two independent patient serum collections, can detect women with DCIS and invasive breast cancer
Journal Articles

Abstract P2-08-07: Predicting DCIS prognosis using infrared and raman spectroscopy of breast calcifications and soft-tissue microstructure

Free
Jayakrupakar Nallala, Doriana Calabrese, Sarah Gosling, Allison Hall, Sarah Pinder, Ihssane Bouybayoune, Lorraine King, Jeffrey Marks, Esther Lips, Thomas Lynch, Donna Pinto, Jelle Wesseling, Shelley Hwang, Keith Rogers, Nick Stone, on behalf of the Grand Challenge PRECISION consortium
Journal: Cancer Research
Cancer Res (2022) 82 (4_Supplement): P2-08-07.
https://doi.org/10.1158/1538-7445.SABCS21-P2-08-07
Published: 15 February 2022
View articletitled, Abstract P2-08-07: Predicting DCIS prognosis using infrared and raman spectroscopy of breast calcifications and soft-tissue microstructure
Journal Articles

Abstract P1-06-02: Characterization of gene- and sample-level APOBEC mutagenesis enrichment with respect to intrinsic subtypes, tumor mutational burden, and immune composition in breast cancer

Free
Jeremy Force, Xiaodi Qin, Dadong Zhang, P. Kelly Marcom, Jeffrey Marks, Mary Love Taylor, Carey Anders, Kouros Owzar, Jichun Xie
Journal: Cancer Research
Cancer Res (2020) 80 (4_Supplement): P1-06-02.
https://doi.org/10.1158/1538-7445.SABCS19-P1-06-02
Published: 15 February 2020
View articletitled, Abstract P1-06-02: Characterization of gene- and sample-level APOBEC mutagenesis enrichment with respect to intrinsic subtypes, tumor mutational burden, and immune composition in breast cancer
Journal Articles

Abstract P3-06-09: Incidence of ROS1 genomic alterations in breast cancer

Free
Jeremy Force, Ethan S Sokol, Mary Love Taylor, Dale Huang, Paul K Marcom, Monika Davare, Jeffrey Marks
Journal: Cancer Research
Cancer Res (2020) 80 (4_Supplement): P3-06-09.
https://doi.org/10.1158/1538-7445.SABCS19-P3-06-09
Published: 15 February 2020
View articletitled, Abstract P3-06-09: Incidence of ROS1 genomic alterations in breast cancer
Journal Articles

Abstract 1570: Early Detection Research Network (EDRN) validation of circulating ovarian cancer biomarkers

Free
Steven J. Skates, Karen S. Anderson, Tao Liu, Vathany Kulasingam, Dustin Rabideau, Chaochao Wu, Michael Gillette, Andrew K. Godwin, Nicole Urban, Anna Lokshin, Jeffrey Marks, Eleftherios Diamandis, Zhen Zhang, Sudhir Srivastava, Jacob Kagan, Christos Patriotis, Karin Rodland
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 1570.
https://doi.org/10.1158/1538-7445.AM2015-1570
Published: 01 August 2015
View articletitled, Abstract 1570: Early Detection Research Network (EDRN) validation of circulating ovarian cancer biomarkers
Journal Articles

Abstract P4-02-05: A blinded multicenter phase II study of a panel of plasma biomarkers for the detection of triple negative breast cancer

Free
Karen S Anderson, Margaret Pepe, Jeffrey Marks, Paul Engstrom, Christos Patriotis, Richard Zangar, Steven Skates, Paul Lampe, Joshua LaBaer, Christopher I Li
Journal: Cancer Research
Cancer Res (2015) 75 (9_Supplement): P4-02-05.
https://doi.org/10.1158/1538-7445.SABCS14-P4-02-05
Published: 01 May 2015
View articletitled, Abstract P4-02-05: A blinded multicenter phase II study of a panel of plasma biomarkers for the detection of triple negative breast cancer
Journal Articles

Abstract 4570: Role of ERRalpha in ovarian cancer

Free
Ellen V. Stevens, Regina Whitaker, Audrey Guinet, Ching-Yi Chang, Carole Grenier, Jeffrey Marks, Donald P. McDonnell, Susan K. Murphy, Andrew Berchuck, Stephanie Gaillard
Journal: Cancer Research
Cancer Res (2014) 74 (19_Supplement): 4570.
https://doi.org/10.1158/1538-7445.AM2014-4570
Published: 01 October 2014
View articletitled, Abstract 4570: Role of ERRalpha in ovarian cancer
Journal Articles

Genome-wide Methylation Analysis Identifies Genes Specific to Breast Cancer Hormone Receptor Status and Risk of Recurrence

Free
Mary Jo Fackler, Christopher B. Umbricht, Danielle Williams, Pedram Argani, Leigh-Ann Cruz, Vanessa F. Merino, Wei Wen Teo, Zhe Zhang, Peng Huang, Kala Visvananthan, Jeffrey Marks, Stephen Ethier, Joe W. Gray, Antonio C. Wolff, Leslie M. Cope, Saraswati Sukumar
Journal: Cancer Research
Cancer Res (2011) 71 (19): 6195–6207.
https://doi.org/10.1158/0008-5472.CAN-11-1630
Published: 29 September 2011
View articletitled, Genome-wide Methylation Analysis Identifies Genes Specific to Breast Cancer Hormone Receptor Status and Risk of Recurrence
Open the PDF for Genome-wide Methylation Analysis Identifies Genes Specific to Breast Cancer Hormone Receptor Status and Risk of Recurrence in another window
Includes: Supplementary data
Journal Articles

Abstract #4399: Role of eotaxin-1 signaling in ovarian cancer

Free
Vera Levina, Brian Nolan, Adele Marrangoni, Jeffrey Marks, Elieser Gorelik, Anna Lokshin
Journal: Cancer Research
Cancer Res (2009) 69 (9_Supplement): 4399.
Published: 01 May 2009
View articletitled, Abstract #4399: Role of eotaxin-1 signaling in ovarian cancer
Journal Articles

Abstract #1021: Association between serous invasive ovarian cancer and variants in candidate DNA damage response genes

Free
Joellen Schildkraut, Edwin Iversen, Jeffrey Marks, Melanie Wilson, Merlise Clyde, Rachel Palmieri, Patricia Moorman, Andrew Berchuck
Journal: Cancer Research
Cancer Res (2009) 69 (9_Supplement): 1021.
Published: 01 May 2009
View articletitled, Abstract #1021: Association between serous invasive ovarian cancer and variants in candidate DNA damage response genes