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Ilan R. Kirsch
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Journal Articles

Challenges to Using Big Data in Cancer

Shawn M. Sweeney, Hisham K. Hamadeh, Natalie Abrams, Stacey J. Adam, Sara Brenner, Dana E. Connors, Gerard J. Davis, Louis Fiore, Susan H. Gawel, Robert L. Grossman, Sean E. Hanlon, Karl Hsu, Gary J. Kelloff, Ilan R. Kirsch, Bill Louv, Deven McGraw, Frank Meng, Daniel Milgram, Robert S. Miller, Emily Morgan, Lata Mukundan, Thomas O'Brien, Paul Robbins, Eric H. Rubin, Wendy S. Rubinstein, Liz Salmi, Teilo Schaller, George Shi, Caroline C. Sigman, Sudhir Srivastava
Journal: Cancer Research
Cancer Res (2023) 83 (8): 1175–1182.
https://doi.org/10.1158/0008-5472.CAN-22-1274
Published: 14 April 2023
View article titled, Challenges to Using Big Data in Cancer
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Journal Articles

Case Studies for Overcoming Challenges in Using Big Data in Cancer

Shawn M. Sweeney, Hisham K. Hamadeh, Natalie Abrams, Stacey J. Adam, Sara Brenner, Dana E. Connors, Gerard J. Davis, Louis D. Fiore, Susan H. Gawel, Robert L. Grossman, Sean E. Hanlon, Karl Hsu, Gary J. Kelloff, Ilan R. Kirsch, Bill Louv, Deven McGraw, Frank Meng, Daniel Milgram, Robert S. Miller, Emily Morgan, Lata Mukundan, Thomas O'Brien, Paul Robbins, Eric H. Rubin, Wendy S. Rubinstein, Liz Salmi, Teilo H. Schaller, George Shi, Caroline C. Sigman, Sudhir Srivastava
Journal: Cancer Research
Cancer Res (2023) 83 (8): 1183–1190.
https://doi.org/10.1158/0008-5472.CAN-22-1277
Published: 14 April 2023
View article titled, Case Studies for Overcoming Challenges in Using Big Data in Cancer
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Journal Articles

Abstract 4208: Integrated oligo aCGH and SKY analysis of genomic alterations in malignant mesothelioma cell lines.

Ester Rozenblum, Geula Klorin, Oleg Glebov, Robert L. Walker, Yoonsoo Park, Paul S. Meltzer, Ilan R. Kirsch, Frederic J. Kaye, Anna V. Roschke
Journal: Cancer Research
Cancer Res (2013) 73 (8_Supplement): 4208.
https://doi.org/10.1158/1538-7445.AM2013-4208
Published: 15 April 2013
View article titled, Abstract 4208: Integrated oligo aCGH and SKY analysis of genomic alterations in malignant mesothelioma cell lines.
Journal Articles

Gene Expression Differences in Normal Esophageal Mucosa Associated with Regression and Progression of Mild and Moderate Squamous Dysplasia in a High-Risk Chinese Population

Nina Joshi, Laura Lee Johnson, Wen-Qiang Wei, Christian C. Abnet, Zhi-Wei Dong, Philip R. Taylor, Paul J. Limburg, Sanford M. Dawsey, Ernest T. Hawk, You-Lin Qiao, Ilan R. Kirsch
Journal: Cancer Research
Cancer Res (2006) 66 (13): 6851–6860.
https://doi.org/10.1158/0008-5472.CAN-06-0662
Published: 03 July 2006
View article titled, Gene Expression Differences in Normal Esophageal Mucosa Associated with Regression and Progression of Mild and Moderate Squamous Dysplasia in a High-Risk Chinese Population
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Journal Articles

Gene expression patterns distinguish human aberrant crypt foci from normal colonic mucosa

Oleg K. Glebov, Luz M. Rodriguez, Peter Soballe, John Denobile, Janet Cliatt, Kenneth Nakahara, Ilan R. Kirsch
Journal: Cancer Research
Cancer Res (2006) 66 (8_Supplement): 81.
Published: 15 April 2006
View article titled, Gene expression patterns distinguish human aberrant crypt foci from normal colonic mucosa
Journal Articles

Mect1-Maml2 Fusion Oncogene Linked to the Aberrant Activation of Cyclic AMP/CREB Regulated Genes

Amy Coxon, Ester Rozenblum, Yoon-Soo Park, Nina Joshi, Junji Tsurutani, Phillip A. Dennis, Ilan R. Kirsch, Frederic J. Kaye
Journal: Cancer Research
Cancer Res (2005) 65 (16): 7137–7144.
https://doi.org/10.1158/0008-5472.CAN-05-1125
Published: 15 August 2005
View article titled, Mect1-Maml2 Fusion Oncogene Linked to the Aberrant Activation of Cyclic AMP/CREB Regulated Genes
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Journal Articles

Karyotypic complexity and heterogeneity as potential determinants for cancer therapy.

Ilan R. Kirsch, Anna V. Roschke, Samir Lababidi, Kristen Gehlhaus, Giovanni Tonon, Anders Wallqvist, David Covell, John N. Weinstein
Journal: Cancer Research
Cancer Res (2005) 65 (9_Supplement): 30.
Published: 01 May 2005
View article titled, Karyotypic complexity and heterogeneity as potential determinants for cancer therapy.
Journal Articles

Identification of fusion genes resulting from chromosomal translocation by analyzing cancer expressed sequences tags

Yoonsoo Hahn, Tapan K. Bera, Kristen Gehlhaus, Ilan R. Kirsch, Ira H. Pastan, Byungkook Lee
Journal: Cancer Research
Cancer Res (2005) 65 (9_Supplement): 383.
Published: 01 May 2005
View article titled, Identification of fusion genes resulting from chromosomal translocation by analyzing cancer expressed sequences tags
Journal Articles

Celecoxib treatment alters the gene expression profile of normal colonic mucosa

Oleg K. Glebov, Luz M. Rodriguez, Patrick Lynch, Sherri Patterson, Henry Lynch, Peter Soballe, John Denobile, Janet Cliatt, Kenneth Nakahara, Jean Jenkins, Casey-Jo Humbyrd, Steven Gallinger, Aby Buchbinder, Gary Gordon, Ernest Hawk, Ilan R. Kirsch
Journal: Cancer Research
Cancer Res (2005) 65 (9_Supplement): 174–175.
Published: 01 May 2005
View article titled, Celecoxib treatment alters the gene expression profile of normal colonic mucosa
Journal Articles

Genetics and Cytogenetics of Multiple Myeloma: A Workshop Report

Rafael Fonseca, Bart Barlogie, Regis Bataille, Christian Bastard, P. Leif Bergsagel, Marta Chesi, Faith E. Davies, Johannes Drach, Philip R. Greipp, Ilan R. Kirsch, W. Michael Kuehl, Jesus M. Hernandez, Stephane Minvielle, Linda M. Pilarski, John D. Shaughnessy, Jr., A. Keith Stewart, Herve Avet-Loiseau
Journal: Cancer Research
Cancer Res (2004) 64 (4): 1546–1558.
https://doi.org/10.1158/0008-5472.CAN-03-2876
Published: 18 February 2004
View article titled, Genetics and Cytogenetics of Multiple Myeloma: <subtitle>A Workshop Report</subtitle>
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Journal Articles

Karyotypic Complexity of the NCI-60 Drug-Screening Panel

Anna V. Roschke, Giovanni Tonon, Kristen S. Gehlhaus, Nicolas McTyre, Kimberly J. Bussey, Samir Lababidi, Dominic A. Scudiero, John N. Weinstein, Ilan R. Kirsch
Journal: Cancer Research
Cancer Res (2003) 63 (24): 8634–8647.
Published: 24 December 2003
View article titled, Karyotypic Complexity of the NCI-60 Drug-Screening Panel
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Includes: Supplementary data
Journal Articles

Apoptotic Susceptibility of Cancer Cells Selected for Camptothecin Resistance: Gene Expression Profiling, Functional Analysis, and Molecular Interaction Mapping

William C. Reinhold, Hosein Kouros-Mehr, Kurt W. Kohn, Alika K. Maunakea, Samir Lababidi, Anna Roschke, Kristen Stover, Jes Alexander, Panayotis Pantazis, Lance Miller, Edison Liu, Ilan R. Kirsch, Yoshimasa Urasaki, Yves Pommier, John N. Weinstein
Journal: Cancer Research
Cancer Res (2003) 63 (5): 1000–1011.
Published: 01 March 2003
View article titled, Apoptotic Susceptibility of Cancer Cells Selected for Camptothecin Resistance: <subtitle>Gene Expression Profiling, Functional Analysis, and Molecular Interaction Mapping</subtitle>
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Includes: Supplementary data
Journal Articles

Mutations in β-Catenin Are Uncommon in Colorectal Cancer Occurring in Occasional Replication Error-positive Tumors

Maria N. Kitaeva, Liam Grogan, John P. Williams, Eileen Dimond, Kenneth Nakahara, Petr Hausner, John W. DeNobile, Peter W. Soballe, Ilan R. Kirsch
Journal: Cancer Research
Cancer Res (1997) 57 (20): 4478–4481.
Published: 01 October 1997
View article titled, Mutations in β-Catenin Are Uncommon in Colorectal Cancer Occurring in Occasional Replication Error-positive Tumors
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Journal Articles

The Absolute Number of Trans-Rearrangements between the TCRG and TCRB Loci Is Predictive of Lymphoma Risk: A Severe Combined Immune Deficiency (SCID) Murine Model

Florigio Lista, Virginia Bertness, Cynthia J. Guidos, Jayne S. Danska, Ilan R. Kirsch
Journal: Cancer Research
Cancer Res (1997) 57 (19): 4408–4413.
Published: 01 October 1997
View article titled, The Absolute Number of Trans-Rearrangements between the <em>TCRG</em> and <em>TCRB</em> Loci Is Predictive of Lymphoma Risk: A Severe Combined Immune Deficiency (SCID) Murine Model
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Journal Articles

Cloning and Characterization of TCTA, a Gene Located at the Site of a t(1;3) Translocation

Peter D. Aplan, Bruce E. Johnson, Edward Russell, David S. Chervinsky, Ilan R. Kirsch
Journal: Cancer Research
Cancer Res (1995) 55 (9): 1917–1921.
Published: 01 May 1995
View article titled, Cloning and Characterization of <em>TCTA</em>, a Gene Located at the Site of a t(1;3) Translocation
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Journal Articles

A Measure of Genomic Instability and Its Relevance to Lymphomagenesis

Ilan R. Kirsch, Stanley Lipkowitz
Journal: Cancer Research
Cancer Res (1992) 52 (19_Supplement): 5545s–5546s.
Published: 01 October 1992
View article titled, A Measure of Genomic Instability and Its Relevance to Lymphomagenesis
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