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Journal Articles

The Epigenetic Evolution of Glioma Is Determined by the IDH1 Mutation Status and Treatment Regimen

Tathiane M. Malta, Thais S. Sabedot, Natalia S. Morosini, Indrani Datta, Luciano Garofano, Wies Vallentgoed, Frederick S. Varn, Kenneth Aldape, Fulvio D'Angelo, Spyridon Bakas, Jill S. Barnholtz-Sloan, Hui K. Gan, Mohammad Hasanain, Ann-Christin Hau, Kevin C. Johnson, Simona Cazacu, Ana C. deCarvalho, Mustafa Khasraw, Emre Kocakavuk, Mathilde C.M. Kouwenhoven, Simona Migliozzi, Simone P. Niclou, Johanna M. Niers, D. Ryan Ormond, Sun Ha Paek, Guido Reifenberger, Peter A. Sillevis Smitt, Marion Smits, Lucy F. Stead, Martin J. van den Bent, Erwin G. Van Meir, Annemiek Walenkamp, Tobias Weiss, Michael Weller, Bart A. Westerman, Bauke Ylstra, Pieter Wesseling, Anna Lasorella, Pim J. French, Laila M. Poisson, Consortium The GLASS, Adelheid Woehrer, Allison K Lowman, Ana C deCarvalho, Ana Valeria Castro, Andrea Transou, Andrew R Brodbelt, Ann-Christin Hau, Anna Lasorella, Anna Golebiewska, Annemiek Walenkamp, Annette M Molinaro, Antonio Iavarone, Azzam Ismail, Bart A Westerman, Bauke Ylstra, Christoph Bock, D. Ryan Ormond, Daniel J Brat, Emre Kocakavuk, Erwin G Van Meir, Floris P Barthel, Frederick S Varn, Fulvio D'Angelo, Gaetano Finocchiaro, Ganesh Rao, Gelareh Zadeh, Guido Reifenberger, Ho Keu ngNg, Hoon Kim, Houtan Noushmehr, Hrvoje Miletic, Hui K Gan, Indrani Datta, Jack Rock, James M Snyder, Jason T Huse, Jennifer M Connelly, Jill S Barnholtz-Sloan, Johanna M Niers, John F deGroot, Kadir C Akdemir, Kasthuri S Kannan, Keith L Ligon, Kenneth Aldape, Ketan R Bulsara, Kevin C Johnson, Kristin D Alfaro, Laila M Poisson, Luciano Garofano, Lucy F Stead, MacLean P Nasrallah, Marion Smits, Martin J van den Bent, Mathilde CM Kouwenhoven, Michael Weller, Mohammad Hasanain, Mustafa Khasraw, Peter V Gould, Peter A Sillevis Smitt, Peter S LaViolette, Philip D Tatman, Pieter Wesseling, Pim J French, Rameen Beroukhim, Roel G.W. Verhaak, Simona Migliozzi, Simone P Niclou, Spyridon Bakas, Steven Kalkanis, Sun Ha Paek, Susan C Short, Tabatabai Ghazaleh, Tathiane M Malta, Thais S Sabedot, Tobias Weiss, Tobias Walbert, Ujjwal Baid, Wies Vallentgoed, W. K. Alfred Yung, Roel G.W. Verhaak, Antonio Iavarone, Houtan Noushmehr

Cancer Res (2024) 84 (5): 741–756.

https://doi.org/10.1158/0008-5472.CAN-23-2093

Published: 04 March 2024

View articletitled, The Epigenetic Evolution of Glioma Is Determined by the IDH1 Mutation Status and Treatment Regimen

Includes: Supplementary data

Journal Articles

Abstract 2168: Longitudinal analysis of diffuse glioma reveals cell state dynamics at recurrence associated with changes in genetics and the microenvironment

Cancer Res (2022) 82 (12_Supplement): 2168.

https://doi.org/10.1158/1538-7445.AM2022-2168

Published: 15 June 2022

View articletitled, Abstract 2168: Longitudinal analysis of diffuse glioma reveals cell state dynamics at recurrence associated with changes in genetics and the microenvironment

Journal Articles

Abstract 2717: Glioma immune microenvironment change during tumor recurrence

Tathiane Maistro Malta, Indrani Datta, Thais Sabedot, Ruicong She, AnaValeria Castro, GLASS Consortium GLASS Consortium, Antonio Iavarone, Laila M. Poisson, Houtan Noushmehr

Cancer Res (2021) 81 (13_Supplement): 2717.

https://doi.org/10.1158/1538-7445.AM2021-2717

Published: 01 July 2021

View articletitled, Abstract 2717: Glioma immune microenvironment change during tumor recurrence

Journal Articles

Abstract 2169: Tumor-myeloid cell interactions are dynamic and influence the evolutionary trajectory of adult diffuse glioma

Frederick S. Varn, Kevin C. Johnson, Floris P. Barthel, Hoon Kim, Taylor Wade, Disha Lodha, Shoaib Ajaib, Nazia Ahmed, Luciano Garofano, Fulvio D'Angelo, Lucy Stead, Houtan Noushmehr, Antonio Iavarone, Roel Verhaak, The GLASS Consortium

Cancer Res (2021) 81 (13_Supplement): 2169.

https://doi.org/10.1158/1538-7445.AM2021-2169

Published: 01 July 2021

View articletitled, Abstract 2169: Tumor-myeloid cell interactions are dynamic and influence the evolutionary trajectory of adult diffuse glioma

Journal Articles

Abstract 2085: The evolutionary trajectory of epigenomics in adult glioma

Indrani Datta, Tathi Malta, Thais Sabedot, Ruicong She, The GLASS Consortium, Antonio Iavarone, Houtan Noushmehr, Laila M. Poisson

Cancer Res (2021) 81 (13_Supplement): 2085.

https://doi.org/10.1158/1538-7445.AM2021-2085

Published: 01 July 2021

View articletitled, Abstract 2085: The evolutionary trajectory of epigenomics in adult glioma

Journal Articles

Abstract 781: Methylation-based liquid biopsy of meningioma primary and recurrent samples

Thais S. Sabedot, Tathiane M. Malta, Ruicong She, James Snyder, Tobias Walbert, Ian Lee, Steven Kalkanis, James Ewing, AnaValeria Castro, Houtan Noushmehr

Cancer Res (2020) 80 (16_Supplement): 781.

https://doi.org/10.1158/1538-7445.AM2020-781

Published: 15 August 2020

View articletitled, Abstract 781: Methylation-based liquid biopsy of meningioma primary and recurrent samples

Journal Articles

Targeting the E3 Ubiquitin Ligase PJA1 Enhances Tumor-Suppressing TGFβ Signaling

Cancer Res (2020) 80 (9): 1819–1832.

https://doi.org/10.1158/0008-5472.CAN-19-3116

Published: 04 May 2020

View articletitled, Targeting the E3 Ubiquitin Ligase PJA1 Enhances Tumor-Suppressing TGFβ Signaling

Includes: Supplementary data

Journal Articles

Abstract 841: Meningioma subgroups associated with functional genomic elements defined by DNA methylation

Tathiane M. Malta, James Snyder, Michael Wells, Ana deCarvalho, Laila Poisson, Camila Souza, Gelareh Zadeh, Kenneth Aldape, Daniela Tirapelli, Carlos Carlotti, Yan Lee, Steven Kalkanis, Tobias Walbert, Houtan Noushmehr

Cancer Res (2019) 79 (13_Supplement): 841.

https://doi.org/10.1158/1538-7445.AM2019-841

Published: 01 July 2019

View articletitled, Abstract 841: Meningioma subgroups associated with functional genomic elements defined by DNA methylation

Journal Articles

Abstract 907: Bioinformatic method to define epigenetically regulated enhancer elements associated with cancer

Thais S. Sabedot, Seth H. Cassel, Galen F. Gao, Caleb A. Lareau, Andrew Cherniack, Alexander Lazar, Cigall Kadoch, Houtan Noushmehr

Cancer Res (2019) 79 (13_Supplement): 907.

https://doi.org/10.1158/1538-7445.AM2019-907

Published: 01 July 2019

View articletitled, Abstract 907: Bioinformatic method to define epigenetically regulated enhancer elements associated with cancer

Journal Articles

Abstract LB-234: Pre-surgical identification of diagnostic, prognostic and predictive DNA methylation-based markers in serum (liquid biopsy) of patients harboring gliomas

Houtan Noushmehr, Thais S. Sabedot, Tathiane M. Malta, Kevin K. Nelson, James Snyder, Michael Wells, Maritza S. Mosella, Ana C. deCarvalho, Karam Asmaro, Lisa Scarpace, Adam M. Robin, Mark L. Rosenblum, Tom Mikkelsen, Jack Rock, Tobias Walbert, Ian Lee, Laila M. Poisson, Steven N. Kalkanis, Ana V. Castro

Cancer Res (2019) 79 (13_Supplement): LB-234.

https://doi.org/10.1158/1538-7445.AM2019-LB-234

Published: 01 July 2019

View articletitled, Abstract LB-234: Pre-surgical identification of diagnostic, prognostic and predictive DNA methylation-based markers in serum (liquid biopsy) of patients harboring gliomas

Journal Articles

Abstract 2615: Systematic approaches to predict oncogenic transcriptional regulatory circuitries identify important nodes in high-grade serous ovarian cancer

Brian J. Abraham, Jessica Reddy, Marcos A. Fonseca, Isaac A. Klein, Lena K. Afeyan, Rosario I. Corona, Paloma Cejas, Felipe Segato, Beth Y. Karlan, Simon A. Gayther, Matthew L. Freedman, Houtan Noushmehr, Myles Brown, Ursula A. Matulonis, Kate Lawrenson, Richard A. Young

Cancer Res (2019) 79 (13_Supplement): 2615.

https://doi.org/10.1158/1538-7445.AM2019-2615

Published: 01 July 2019

View articletitled, Abstract 2615: Systematic approaches to predict oncogenic transcriptional regulatory circuitries identify important nodes in high-grade serous ovarian cancer

Journal Articles

Abstract 1640: Deep learning classification of neuro-oncology medical documents

Michael Wells, Thais Sabedot, Tathiane Malta, James Snyder, Laila Poisson, Houtan Noushmehr

Cancer Res (2019) 79 (13_Supplement): 1640.

https://doi.org/10.1158/1538-7445.AM2019-1640

Published: 01 July 2019

View articletitled, Abstract 1640: Deep learning classification of neuro-oncology medical documents

Journal Articles

Abstract 1939: Non-invasive prediction of glioma tumor stemness using multimodal MRI

Esmaeil Davoodi-Bojd, Tathiane Malta, Brent Griffith, James Snyder, Tobias Walbert, Houtan Noushmehr, Hamid Soltanian-Zadeh

Cancer Res (2019) 79 (13_Supplement): 1939.

https://doi.org/10.1158/1538-7445.AM2019-1939

Published: 01 July 2019

View articletitled, Abstract 1939: Non-invasive prediction of glioma tumor stemness using multimodal MRI

Journal Articles

Functional Analysis and Fine Mapping of the 9p22.2 Ovarian Cancer Susceptibility Locus

Cancer Res (2019) 79 (3): 467–481.

https://doi.org/10.1158/0008-5472.CAN-17-3864

Published: 01 February 2019

View articletitled, Functional Analysis and Fine Mapping of the 9p22.2 Ovarian Cancer Susceptibility Locus

Includes: Supplementary data

Journal Articles

Abstract 1494: SOX18: A novel master regulator of high-grade serous ovarian tumorigenesis

Annie Y. Liu, Kevin C. Vavra, Rosario I. Corona, Forough Abassi, Marcos Fonseca, Felipe Segato, Matthew L. Freedman, Simon A. Gayther, Houtan Noushmehr, Kate Lawrenson

Cancer Res (2018) 78 (13_Supplement): 1494.

https://doi.org/10.1158/1538-7445.AM2018-1494

Published: 01 July 2018

View articletitled, Abstract 1494: SOX18: A novel master regulator of high-grade serous ovarian tumorigenesis

Journal Articles

Abstract LB-373: Comprehensive analysis of cancer stemness

Cancer Res (2018) 78 (13_Supplement): LB-373.

https://doi.org/10.1158/1538-7445.AM2018-LB-373

Published: 01 July 2018

View articletitled, Abstract LB-373: Comprehensive analysis of cancer stemness

Journal Articles

Abstract 2417: Large scale integrated transcriptomic and epigenetic profiling defines the molecular hallmarks of HGSOC and disease origins

Kate Lawrenson, Marcos Abraao, Felipe Segato, Janet M. Lee, Simon Coetzee, Ji-Heui Seo, Matthew L. Freedman, Dennis Hazelett, Simon Gayther, Houtan Noushmehr

Cancer Res (2017) 77 (13_Supplement): 2417.

https://doi.org/10.1158/1538-7445.AM2017-2417

Published: 01 July 2017

View articletitled, Abstract 2417: Large scale integrated transcriptomic and epigenetic profiling defines the molecular hallmarks of HGSOC and disease origins

Journal Articles

Abstract LB-004: Molecular hallmarks of cancer: Stemness

Tathiane Malta, Artem Sokolov, Andrew J. Gentles, Tomasz Burzykowski, Olivier Gevaert, The Stemness Analysis Working Group TCGA PanCancerNetwork, Peter W. Laird, Houtan Noushmehr, Maciej Wiznerowicz

Cancer Res (2017) 77 (13_Supplement): LB-004.

https://doi.org/10.1158/1538-7445.AM2017-LB-004

Published: 01 July 2017

View articletitled, Abstract LB-004: Molecular hallmarks of cancer: Stemness

Journal Articles

Abstract 2413: SIRT1 regulates Mxd1 throughout melanoma progression

Fabiana M. Meliso, Danilo Micali, Camila T. Silva, Thais S. Sabedot, Simon G. Coetzee, Adrian Koch, Fabian B. Fahlbusch, Houtan Noushmehr, Regine Schneider-Stock, Miriam G. Jasiulionis

Cancer Res (2017) 77 (13_Supplement): 2413.

https://doi.org/10.1158/1538-7445.AM2017-2413

Published: 01 July 2017

View articletitled, Abstract 2413: SIRT1 regulates Mxd1 throughout melanoma progression

Journal Articles

Abstract 780: Multi-omic profiling of gliomas reveals distinct DNA methylation changes at tumor recurrence

Lindsay C. Stetson, Camila Ferreira de Souza, Tathiane Maistro Malta, Thais Sarraf Sabedot, Quinn Ostrom, Peter Liao, Daniela Pretti da Cunha Tirapelli, Luciano Neder, Carlos Gilberto Carlotti, Rehan Akbani, Sofie Salama, Laila Poisson, Daniel Brat, The Cancer Genome Atlas Network, Houtan Noushmehr, Jill Barnholtz-Sloan

Cancer Res (2016) 76 (14_Supplement): 780.

https://doi.org/10.1158/1538-7445.AM2016-780

Published: 15 July 2016

View articletitled, Abstract 780: Multi-omic profiling of gliomas reveals distinct DNA methylation changes at tumor recurrence

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The Epigenetic Evolution of Glioma Is Determined by the IDH1 Mutation Status and Treatment Regimen

Abstract 2168: Longitudinal analysis of diffuse glioma reveals cell state dynamics at recurrence associated with changes in genetics and the microenvironment

Abstract 2717: Glioma immune microenvironment change during tumor recurrence

Abstract 2169: Tumor-myeloid cell interactions are dynamic and influence the evolutionary trajectory of adult diffuse glioma

Abstract 2085: The evolutionary trajectory of epigenomics in adult glioma

Abstract 781: Methylation-based liquid biopsy of meningioma primary and recurrent samples

Targeting the E3 Ubiquitin Ligase PJA1 Enhances Tumor-Suppressing TGFβ Signaling

Abstract 841: Meningioma subgroups associated with functional genomic elements defined by DNA methylation

Abstract 907: Bioinformatic method to define epigenetically regulated enhancer elements associated with cancer

Abstract LB-234: Pre-surgical identification of diagnostic, prognostic and predictive DNA methylation-based markers in serum (liquid biopsy) of patients harboring gliomas

Abstract 2615: Systematic approaches to predict oncogenic transcriptional regulatory circuitries identify important nodes in high-grade serous ovarian cancer

Abstract 1640: Deep learning classification of neuro-oncology medical documents

Abstract 1939: Non-invasive prediction of glioma tumor stemness using multimodal MRI

Functional Analysis and Fine Mapping of the 9p22.2 Ovarian Cancer Susceptibility Locus

Abstract 1494: SOX18: A novel master regulator of high-grade serous ovarian tumorigenesis

Abstract LB-373: Comprehensive analysis of cancer stemness

Abstract 2417: Large scale integrated transcriptomic and epigenetic profiling defines the molecular hallmarks of HGSOC and disease origins

Abstract LB-004: Molecular hallmarks of cancer: Stemness

Abstract 2413: SIRT1 regulates Mxd1 throughout melanoma progression

Abstract 780: Multi-omic profiling of gliomas reveals distinct DNA methylation changes at tumor recurrence

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