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Elizabeth J. Perlman
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Journal Articles

Integrative Genomic Analyses Identify LncRNA Regulatory Networks across Pediatric Leukemias and Solid Tumors

Apexa Modi, Gonzalo Lopez, Karina L. Conkrite, Chun Su, Tsz Ching Leung, Sathvik Ramanan, Elisabetta Manduchi, Matthew E. Johnson, Daphne Cheung, Samantha Gadd, Jinghui Zhang, Malcolm A. Smith, Jaime M. Guidry Auvil, Soheil Meshinchi, Elizabeth J. Perlman, Stephen P. Hunger, John M. Maris, Andrew D. Wells, Struan F.A. Grant, Sharon J. Diskin
Journal: Cancer Research
Cancer Res (2023) 83 (20): 3462–3477.
https://doi.org/10.1158/0008-5472.CAN-22-3186
Published: 13 October 2023
View articletitled, Integrative Genomic Analyses Identify LncRNA Regulatory Networks across Pediatric Leukemias and Solid Tumors
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Includes: Supplementary data
Journal Articles

Abstract 3028: Integrative genomics reveals lncRNAs associated with pediatric cancer

Apexa Modi, Gonzalo Lopez, Karina L. Conkrite, Tsz Ching Leung, Sathvik Ramanan, Daphne Cheung, Chun Su, Matthew E. Johnson, Elisabetta Manduchi, Samantha Gadd, Jinghui Zhang, Malcolm A. Smith, Jaime M. Guidry Auvil, Daniela S. Gerhard, Soheil Meshinchi, Elizabeth J. Perlman, Stephen P. Hunger, John M. Maris, Andrew D. Wells, Struan F. Grant, Sharon J. Diskin
Journal: Cancer Research
Cancer Res (2021) 81 (13_Supplement): 3028.
https://doi.org/10.1158/1538-7445.AM2021-3028
Published: 01 July 2021
View articletitled, Abstract 3028: Integrative genomics reveals lncRNAs associated with pediatric cancer
Journal Articles

Abstract LB-180: The genetic landscape of Wilms tumor

Samantha L. Gadd, Amy L. Walz, Ariadne HAG Ooms, Vicki Huff, Daniela S. Gerhard, Malcolm A. Smith, Jaime M. Guidry Auvil, Leandro Hermida, Tanja Davidsen, Patee Gesuwan, Daoud Meerzaman, Yussanne Ma, Marco A. Marra, Jeffrey S. Dome, Charles G. Mullighan, David A. Wheeler, Oliver A. Hampton, Julie M. Gastier-Foster, Nicole Ross, Elizabeth J. Perlman
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): LB-180.
https://doi.org/10.1158/1538-7445.AM2016-LB-180
Published: 15 July 2016
View articletitled, Abstract LB-180: The genetic landscape of Wilms tumor
Journal Articles

Abstract 3087: Whole genome sequencing of rhabdoid tumors of the kidney

Hye-Jung E. Chun, Kelsey Zhu, Jenny Q. Qian, Karen L. Mungall, Yussanne Ma, Yong-Jun Zhao, Andrew J. Mungall, Richard A. Moore, Jacquie E. Schein, Daniela S. Gerhard, Elizabeth J. Perlman, Marco A. Marra
Journal: Cancer Research
Cancer Res (2014) 74 (19_Supplement): 3087.
https://doi.org/10.1158/1538-7445.AM2014-3087
Published: 01 October 2014
View articletitled, Abstract 3087: Whole genome sequencing of rhabdoid tumors of the kidney
Journal Articles

Abstract 1439: Loss of expression of SWI/SNF subunits in high risk Wilms tumor is accompanied by global gene expression changes

Samantha L. Gadd, Daniela S. Gerhard, Malcom A. Smith, Jaime Guidry Auvil, Vicki Huff, James I. Geller, Jeffrey Dome, Chiang-Ching Huang, Elizabeth J. Perlman
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 1439.
https://doi.org/10.1158/1538-7445.AM2012-1439
Published: 15 April 2012
View articletitled, Abstract 1439: Loss of expression of SWI/SNF subunits in high risk Wilms tumor is accompanied by global gene expression changes
Journal Articles

Abstract 68: Increased H3K27 trimethylation is associated with decreased expression of miRNAs and bivalently modified genes in rhabdoid tumors

Samantha L. Gadd, Elizabeth J. Perlman
Journal: Cancer Research
Cancer Res (2011) 71 (8_Supplement): 68.
https://doi.org/10.1158/1538-7445.AM2011-68
Published: 15 April 2011
View articletitled, Abstract 68: Increased H3K27 trimethylation is associated with decreased expression of miRNAs and bivalently modified genes in rhabdoid tumors
Journal Articles

Abstract 5353: Comprehensive Ggnomic analysis of diffuse hyperplastic perilobar nephroblastomatosis (DHPLN)

Samantha L. Gadd, Chiang-Ching Huang, Yiling Lu, Vicki Huff, Elizabeth J. Perlman
Journal: Cancer Research
Cancer Res (2011) 71 (8_Supplement): 5353.
https://doi.org/10.1158/1538-7445.AM2011-5353
Published: 15 April 2011
View articletitled, Abstract 5353: Comprehensive Ggnomic analysis of diffuse hyperplastic perilobar nephroblastomatosis (DHPLN)
Journal Articles

Methylation-Associated Silencing of the Heat Shock Protein 47 Gene in Human Neuroblastoma

Qiwei Yang, Shuqing Liu, Yufeng Tian, Chiler Hasan, Donna Kersey, Helen R. Salwen, Alexandre Chlenski, Elizabeth J. Perlman, Susan L. Cohn
Journal: Cancer Research
Cancer Res (2004) 64 (13): 4531–4538.
https://doi.org/10.1158/0008-5472.CAN-04-0956
Published: 01 July 2004
View articletitled, Methylation-Associated Silencing of the Heat Shock Protein 47 Gene in Human Neuroblastoma
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Journal Articles

POU5F1 (OCT3/4) Identifies Cells with Pluripotent Potential in Human Germ Cell Tumors

Leendert H. J. Looijenga, Hans Stoop, Hubert P. J. C. de Leeuw, Carlos A. de Gouveia Brazao, Ad J. M. Gillis, Kees E. P. van Roozendaal, Everardus J. J. van Zoelen, Rob F. A. Weber, Katja P. Wolffenbuttel, Herman van Dekken, Friedemann Honecker, Carsten Bokemeyer, Elizabeth J. Perlman, Dominik T. Schneider, Juha Kononen, Guido Sauter, J. Wolter Oosterhuis
Journal: Cancer Research
Cancer Res (2003) 63 (9): 2244–2250.
Published: 01 May 2003
View articletitled, POU5F1 (OCT3/4) Identifies Cells with Pluripotent Potential in Human Germ Cell Tumors
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Journal Articles

Functional Genomic Comparison of Lineage-related Human Bladder Cancer Cell Lines with Differing Tumorigenic and Metastatic Potentials by Spectral Karyotyping, Comparative Genomic Hybridization, and a Novel Method of Positional Expression Profiling

Michael A. Harding, Karen C. Arden, James W. Gildea, John J. Gildea, Elizabeth J. Perlman, Carrie Viars, Dan Theodorescu
Journal: Cancer Research
Cancer Res (2002) 62 (23): 6981–6989.
Published: 01 December 2002
View articletitled, Functional Genomic Comparison of Lineage-related Human Bladder Cancer Cell Lines with Differing Tumorigenic and Metastatic Potentials by Spectral Karyotyping, Comparative Genomic Hybridization, and a Novel Method of Positional Expression Profiling
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Journal Articles

Multipoint Imprinting Analysis Indicates a Common Precursor Cell for Gonadal and Nongonadal Pediatric Germ Cell Tumors

Dominik T. Schneider, Amy E. Schuster, Michael K. Fritsch, Jie Hu, Thomas Olson, Stephen Lauer, Ulrich Göbel, Elizabeth J. Perlman, the Pediatric Oncology Group, German Pediatric Germ Cell Tumor Study Group
Journal: Cancer Research
Cancer Res (2001) 61 (19): 7268–7276.
Published: 01 October 2001
View articletitled, Multipoint Imprinting Analysis Indicates a Common Precursor Cell for Gonadal and Nongonadal Pediatric Germ Cell Tumors
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Journal Articles

High Telomerase Reverse Transcriptase (hTERT) Messenger RNA Level Correlates with Tumor Recurrence in Patients with Favorable Histology Wilms’ Tumor

Jeffrey S. Dome, Seung Chung, Tracy Bergemann, Christopher B. Umbricht, Motoyasu Saji, Lisa A. Carey, Paul E. Grundy, Elizabeth J. Perlman, Norman E. Breslow, Saraswati Sukumar
Journal: Cancer Research
Cancer Res (1999) 59 (17): 4301–4307.
Published: 01 September 1999
View articletitled, High Telomerase Reverse Transcriptase (hTERT) Messenger RNA Level Correlates with Tumor Recurrence in Patients with Favorable Histology Wilms’ Tumor
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Journal Articles

Recurrent Involvement of 2p23 in Inflammatory Myofibroblastic Tumors

Constance A. Griffin, Anita L. Hawkins, Cecily Dvorak, Carol Henkle, Tara Ellingham, Elizabeth J. Perlman
Journal: Cancer Research
Cancer Res (1999) 59 (12): 2776–2780.
Published: 15 June 1999
View articletitled, Recurrent Involvement of 2p23 in Inflammatory Myofibroblastic Tumors
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Journal Articles

Genetic Analysis of Ovarian Germ Cell Tumors by Comparative Genomic Hybridization

Maureen A. Riopel, Amy Spellerberg, Constance A. Griffin, Elizabeth J. Perlman
Journal: Cancer Research
Cancer Res (1998) 58 (14): 3105–3110.
Published: 01 July 1998
View articletitled, Genetic Analysis of Ovarian Germ Cell Tumors by Comparative Genomic Hybridization
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Journal Articles

Reduced Expression of the Cyclin-dependent Kinase Inhibitor Gene p57KIP2 in Wilms' Tumor

Jeffrey S. Thompson, Kimberly J. Reese, Michael R. DeBaun, Elizabeth J. Perlman, Andrew P. Feinberg
Journal: Cancer Research
Cancer Res (1996) 56 (24): 5723–5727.
Published: 01 December 1996
View articletitled, Reduced Expression of the Cyclin-dependent Kinase Inhibitor Gene p57KIP2 in Wilms' Tumor
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