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Dylan Z. Kelley
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Journal Articles

Abstract 5206: Role of super-enhancers in HPV+ head and neck squamous cell carcinoma

Free
Fernando T. Zamuner, Ilya Vorontsov, Emily Flam, Vera Mukhina, Ludmila Danilova, Tingting Ou, Elena Stavrovskaya, Theresa Guo, Eric Windsor, Dylan Z. Kelley, Michael Parfenov, Michael Considine, Elana J. Fertig, Alexander Favorov, Daria A. Gaykalova
Journal: Cancer Research
Cancer Res (2019) 79 (13_Supplement): 5206.
https://doi.org/10.1158/1538-7445.AM2019-5206
Published: 01 July 2019
View articletitled, Abstract 5206: Role of super-enhancers in HPV+ head and neck squamous cell carcinoma
Journal Articles

Abstract 364: Differentially methylated super-enhancers regulate gene expression in human papillomavirus-related head and neck squamous cell carcinoma

Free
Emily L. Flam, Dylan Z. Kelley, Elena Stavrovskaya, Ludmila Danilova, Theresa Guo, Michael Considine, Jiang Qian, Joseph A. Califano, Alexander V. Favorov, Elana J. Fertig, Daria A. Gaykalova
Journal: Cancer Research
Cancer Res (2018) 78 (13_Supplement): 364.
https://doi.org/10.1158/1538-7445.AM2018-364
Published: 01 July 2018
View articletitled, Abstract 364: Differentially methylated super-enhancers regulate gene expression in human papillomavirus-related head and neck squamous cell carcinoma
Journal Articles

Integrated Analysis of Whole-Genome ChIP-Seq and RNA-Seq Data of Primary Head and Neck Tumor Samples Associates HPV Integration Sites with Open Chromatin Marks

Available to Purchase
Dylan Z. Kelley, Emily L. Flam, Evgeny Izumchenko, Ludmila V. Danilova, Hildegard A. Wulf, Theresa Guo, Dzov A. Singman, Bahman Afsari, Alyza M. Skaist, Michael Considine, Jane A. Welch, Elena Stavrovskaya, Justin A. Bishop, William H. Westra, Zubair Khan, Wayne M. Koch, David Sidransky, Sarah J. Wheelan, Joseph A. Califano, Alexander V. Favorov, Elana J. Fertig, Daria A. Gaykalova
Journal: Cancer Research
Cancer Res (2017) 77 (23): 6538–6550.
https://doi.org/10.1158/0008-5472.CAN-17-0833
Published: 30 November 2017
View articletitled, Integrated Analysis of Whole-Genome ChIP-Seq and RNA-Seq Data of Primary Head and Neck Tumor Samples Associates HPV Integration Sites with Open Chromatin Marks
Open the PDF for Integrated Analysis of Whole-Genome ChIP-Seq and RNA-Seq Data of Primary Head and Neck Tumor Samples Associates HPV Integration Sites with Open Chromatin Marks in another window
Includes: Supplementary data
Journal Articles

A Novel Functional Splice Variant of AKT3 Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Cancers

Available to Purchase
Theresa Guo, Akihiro Sakai, Bahman Afsari, Michael Considine, Ludmila Danilova, Alexander V. Favorov, Srinivasan Yegnasubramanian, Dylan Z. Kelley, Emily Flam, Patrick K. Ha, Zubair Khan, Sarah J. Wheelan, J. Silvio Gutkind, Elana J. Fertig, Daria A. Gaykalova, Joseph Califano
Journal: Cancer Research
Cancer Res (2017) 77 (19): 5248–5258.
https://doi.org/10.1158/0008-5472.CAN-16-3106
Published: 01 October 2017
View articletitled, A Novel Functional Splice Variant of AKT3 Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Cancers
Open the PDF for A Novel Functional Splice Variant of AKT3 Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Cancers in another window
Includes: Supplementary data
Journal Articles

Abstract 4474: Functional characterization of alternatively spliced GSN in head and neck cancer

Free
Dylan Z. Kelley, Emily L. Flam, Theresa Guo, Craig Bohrson, Michael Considine, Ludmila V. Danilova, Justin A. Bishop, Chi Zhang, Wayne M. Koch, David Sidransky, William Westra, Sarah Wheelan, Liliana Florea, Elana J. Fertig, Joseph A. Califano, Daria A. Gaykalova
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 4474.
https://doi.org/10.1158/1538-7445.AM2017-4474
Published: 01 July 2017
View articletitled, Abstract 4474: Functional characterization of alternatively spliced GSN in head and neck cancer
Journal Articles

Abstract 2424: The in-parallel whole-genome ChIP-Seq analysis of primary tissues, patient derived xenografts, and cancer cell lines from HPV-relative HNSCC samples

Free
Dylan Z. Kelley, Emily L. Flam, Hildegard A. Wulf, Theresa Guo, Evgeny Izumchenko, Dzov A. Singman, Ludmila V. Danilova, Elena D. Stavrovskaya, Michael Considine, Justin A. Bishop, William H. Westra, Zubair Khan, Wayne M. Koch, David Sidransky, Sarah Wheelan, Joseph A. Califano, Alexander V. Favorov, Elana J. Fertig, Daria A. Gaykalova
Journal: Cancer Research
Cancer Res (2017) 77 (13_Supplement): 2424.
https://doi.org/10.1158/1538-7445.AM2017-2424
Published: 01 July 2017
View articletitled, Abstract 2424: The in-parallel whole-genome ChIP-Seq analysis of primary tissues, patient derived xenografts, and cancer cell lines from HPV-relative HNSCC samples