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Journal Articles

Abstract 5447: Artificial intelligence (AI)-based classification of stromal subtypes reveals associations between stromal composition and prognosis in NSCLC

Fedaa Najdawi, Sandhya Srinivasan, Neel Patel, Michael G. Drage, Christian Kirkup, Chintan Parmar, Jacqueline Brosnan-Cashman, Michael Montalto, Andrew H. Beck, Archit Khosla, Ilan Wapinski, Ben Glass, Murray Resnick, Matthew Bronnimann

Cancer Res (2023) 83 (7_Supplement): 5447.

https://doi.org/10.1158/1538-7445.AM2023-5447

Published: 04 April 2023

View article titled, Abstract 5447: Artificial intelligence (AI)-based classification of stromal subtypes reveals associations between stromal composition and prognosis in NSCLC

Journal Articles

Abstract P6-04-08: Machine learning-based characterization of the breast cancer tumor microenvironment for assessment of neoadjuvant-treatment response

Christian Kirkup, Sanjana Vasudevan, Filip Kos, Benjamin Trotter, Murray Resnick, Andrew H. Beck, Michael Montalto, Ilan Wapinski, Ben Glass, Mary Lin, Stephanie Hennek, Archit Khosla, Michael G. Drage, Laura Chambre

Cancer Res (2023) 83 (5_Supplement): P6-04-08.

https://doi.org/10.1158/1538-7445.SABCS22-P6-04-08

Published: 01 March 2023

View article titled, Abstract P6-04-08: Machine learning-based characterization of the breast cancer tumor microenvironment for assessment of neoadjuvant-treatment response

Journal Articles

Abstract P4-09-08: AI-based quantitation of cancer cell and fibroblast nuclear morphology reflects transcriptomic heterogeneity and predicts survival in breast cancer

Cancer Res (2023) 83 (5_Supplement): P4-09-08.

https://doi.org/10.1158/1538-7445.SABCS22-P4-09-08

Published: 01 March 2023

View article titled, Abstract P4-09-08: AI-based quantitation of cancer cell and fibroblast nuclear morphology reflects transcriptomic heterogeneity and predicts survival in breast cancer

Journal Articles

Abstract P5-02-09: Quantitative analysis of fiber-level collagen features in H&E whole-slide images predicts neoadjuvant therapy response in patients with HER2+ breast cancer

Cancer Res (2023) 83 (5_Supplement): P5-02-09.

https://doi.org/10.1158/1538-7445.SABCS22-P5-02-09

Published: 01 March 2023

View article titled, Abstract P5-02-09: Quantitative analysis of fiber-level collagen features in H&E whole-slide images predicts neoadjuvant therapy response in patients with HER2+ breast cancer

Journal Articles

Abstract CT112: AI-powered and manual assessment of PD-L1 are comparable in predicting response to neoadjuvant atezolizumab in patients (pts) with resectable non-squamous, non-small cell lung cancer (NSCLC)

Cancer Res (2022) 82 (12_Supplement): CT112.

https://doi.org/10.1158/1538-7445.AM2022-CT112

Published: 15 June 2022

View article titled, Abstract CT112: AI-powered and manual assessment of PD-L1 are comparable in predicting response to neoadjuvant atezolizumab in patients (pts) with resectable non-squamous, non-small cell lung cancer (NSCLC)

Journal Articles

Abstract PD6-04: Deep-learning based prediction of homologous recombination deficiency (hrd) status from histological features in breast cancer; a research study

Amaro Taylor-Weiner, Aryan Pedawi, Wan Fung Chui, James Diao, Jason Wang, Victoria Mountain, Benjamin Glass, Hunter Elliott, Ilan Wapinski, Michael Montalto, Aditya Khosla, Andrew H. Beck

Cancer Res (2021) 81 (4_Supplement): PD6-04.

https://doi.org/10.1158/1538-7445.SABCS20-PD6-04

Published: 15 February 2021

View article titled, Abstract PD6-04: Deep-learning based prediction of homologous recombination deficiency (hrd) status from histological features in breast cancer; a research study

Journal Articles

Abstract 2017: Association of digital and manual quantification of tumor PD-L1 expression with outcomes in nivolumab-treated patients

Chunzhe Duan, Michael Montalto, George Lee, Dimple Pandya, Daniel Cohen, Han Chang, Hao Tang, Nishant Agrawal, Hunter Elliott, Benjamin Glass, Ilan Wapinski, Robin Edwards, Andrew H. Beck, Vipul Baxi

Cancer Res (2020) 80 (16_Supplement): 2017.

https://doi.org/10.1158/1538-7445.AM2020-2017

Published: 15 August 2020

View article titled, Abstract 2017: Association of digital and manual quantification of tumor PD-L1 expression with outcomes in nivolumab-treated patients

Journal Articles

Abstract P5-02-02: Artificial intelligence powered predictive analysis of atypical ductal hyperplasia from digitized pathology images

Jennifer K. Kerner, Allison Cleary, Suyog Jain, Harsha Pokkalla, Benjamin Glass, Sam Grossmith, Maya Harary, Elizabeth Mittendorf, Andrew H. Beck, Aditya Khosla, Stuart J. Schnitt, Ilan Wapinski, Tari King

Cancer Res (2020) 80 (4_Supplement): P5-02-02.

https://doi.org/10.1158/1538-7445.SABCS19-P5-02-02

Published: 15 February 2020

View article titled, Abstract P5-02-02: Artificial intelligence powered predictive analysis of atypical ductal hyperplasia from digitized pathology images

Journal Articles

EN1 Is a Transcriptional Dependency in Triple-Negative Breast Cancer Associated with Brain Metastasis

Cancer Res (2019) 79 (16): 4173–4183.

https://doi.org/10.1158/0008-5472.CAN-18-3264

Published: 15 August 2019

View article titled, <em>EN1</em> Is a Transcriptional Dependency in Triple-Negative Breast Cancer Associated with Brain Metastasis

Includes: Supplementary data

Journal Articles

Abstract A05: Androgen receptor expression and breast cancer survival in the Nurses' Health Study cohorts

Kevin H. Kensler, Elizabeth M. Poole, Laura C. Collins, Andrew H. Beck, Bernard A. Rosner, A. Heather Eliassen, Susan E. Hankinson, Myles Brown, Rulla M. Tamimi

Cancer Res (2017) 77 (22_Supplement): A05.

https://doi.org/10.1158/1538-7445.NEWFRONT17-A05

Published: 14 November 2017

View article titled, Abstract A05: Androgen receptor expression and breast cancer survival in the Nurses' Health Study cohorts

Journal Articles

Morphoproteomic Characterization of Lung Squamous Cell Carcinoma Fragmentation, a Histological Marker of Increased Tumor Invasiveness

Ruben Casanova, Daniel Xia, Undine Rulle, Paolo Nanni, Jonas Grossmann, Bart Vrugt, Reto Wettstein, Rafael Ballester-Ripoll, Alberto Astolfo, Walter Weder, Holger Moch, Marco Stampanoni, Andrew H. Beck, Alex Soltermann

Cancer Res (2017) 77 (10): 2585–2593.

https://doi.org/10.1158/0008-5472.CAN-16-2363

Published: 14 May 2017

View article titled, Morphoproteomic Characterization of Lung Squamous Cell Carcinoma Fragmentation, a Histological Marker of Increased Tumor Invasiveness

Includes: Supplementary data

Journal Articles

Aspirin Suppresses Growth in PI3K-Mutant Breast Cancer by Activating AMPK and Inhibiting mTORC1 Signaling

Whitney S. Henry, Tyler Laszewski, Tiffany Tsang, Francisco Beca, Andrew H. Beck, Sandra S. McAllister, Alex Toker

Cancer Res (2017) 77 (3): 790–801.

https://doi.org/10.1158/0008-5472.CAN-16-2400

Published: 31 January 2017

View article titled, Aspirin Suppresses Growth in PI3K-Mutant Breast Cancer by Activating AMPK and Inhibiting mTORC1 Signaling

Includes: Supplementary data

Journal Articles

Plasma 25-Hydroxyvitamin D and Risk of Breast Cancer in Women Followed over 20 Years

A. Heather Eliassen, Erica T. Warner, Bernard Rosner, Laura C. Collins, Andrew H. Beck, Liza M. Quintana, Rulla M. Tamimi, Susan E. Hankinson

Cancer Res (2016) 76 (18): 5423–5430.

https://doi.org/10.1158/0008-5472.CAN-16-0353

Published: 15 September 2016

View article titled, Plasma 25-Hydroxyvitamin D and Risk of Breast Cancer in Women Followed over 20 Years

Journal Articles

Abstract PR07: Mechanisms of stromal reprogramming mediated by heat shock factor 1

Ruth Scherz-Shouval, Marc L. Mendillo, Giorgio Gaglia, Irit Ben-Aharon, Andrew H. Beck, Luke Whitesell, Susan Lindquist

Cancer Res (2016) 76 (15_Supplement): PR07.

https://doi.org/10.1158/1538-7445.TME16-PR07

Published: 28 July 2016

View article titled, Abstract PR07: Mechanisms of stromal reprogramming mediated by heat shock factor 1

Journal Articles

Abstract 4229: Physical expansion of tissue microarrays for high-resolution imaging of normal and cancer samples with conventional microscopy

Octavian Bucur, Yongxin Zhao, Edward Boyden, Andrew H. Beck

Cancer Res (2016) 76 (14_Supplement): 4229.

https://doi.org/10.1158/1538-7445.AM2016-4229

Published: 15 July 2016

View article titled, Abstract 4229: Physical expansion of tissue microarrays for high-resolution imaging of normal and cancer samples with conventional microscopy

Journal Articles

Abstract 2627: Molecular analyses of histopathologic morphologic features in breast cancer

Yu Jing Jan Heng, TCGA Breast Cancer Expert Pathology Committee, Jong Cheol Jeong, Deena M.A Gendoo, Benjamin Haibe-Kains, Giovanni Ciriello, Katherine A. Hoadley, Charles M. Perou, Andrew H. Beck

Cancer Res (2016) 76 (14_Supplement): 2627.

https://doi.org/10.1158/1538-7445.AM2016-2627

Published: 15 July 2016

View article titled, Abstract 2627: Molecular analyses of histopathologic morphologic features in breast cancer

Journal Articles

Abstract 805: The molecular mechanisms of obesity driving breast cancer etiology and prognosis in post-menopausal women

Yu Jing Jan Heng, Jun Wang, Aditi Hazra, David J. Hunter, A. Heather Eliassen, Rulla M. Tamimi, Susan E. Hankinson, Andrew H. Beck

Cancer Res (2016) 76 (14_Supplement): 805.

https://doi.org/10.1158/1538-7445.AM2016-805

Published: 15 July 2016

View article titled, Abstract 805: The molecular mechanisms of obesity driving breast cancer etiology and prognosis in post-menopausal women

Journal Articles

Abstract 5477: MERIT40 is an Akt substrate that promotes resolution of DNA damage induced by chemotherapy

Kristin K. Brown, Laleh Montaser-Kouhsari, Andrew H. Beck, Alex Toker

Cancer Res (2015) 75 (15_Supplement): 5477.

https://doi.org/10.1158/1538-7445.AM2015-5477

Published: 01 August 2015

View article titled, Abstract 5477: MERIT40 is an Akt substrate that promotes resolution of DNA damage induced by chemotherapy

Journal Articles

Abstract 2985: Systematic identification of sex-linked molecular alterations and therapeutic strategies in cancer

Jonathan Ma, Sadhika Malladi, Andrew H. Beck

Cancer Res (2015) 75 (15_Supplement): 2985.

https://doi.org/10.1158/1538-7445.AM2015-2985

Published: 01 August 2015

View article titled, Abstract 2985: Systematic identification of sex-linked molecular alterations and therapeutic strategies in cancer

Journal Articles

Abstract 3477: 3D morphological hallmarks of breast carcinogenesis: Diagnosis of non-invasive and invasive breast cancer with Lightsheet microscopy

Octavian Bucur, Humayun Irshad, Laleh Montaser-Kouhsari, Nicholas W. Knoblauch, Eun-Yeong Oh, Jonathan Nowak, Andrew H. Beck

Cancer Res (2015) 75 (15_Supplement): 3477.

https://doi.org/10.1158/1538-7445.AM2015-3477

Published: 01 August 2015

View article titled, Abstract 3477: 3D morphological hallmarks of breast carcinogenesis: Diagnosis of non-invasive and invasive breast cancer with Lightsheet microscopy

NARROW

Abstract 5447: Artificial intelligence (AI)-based classification of stromal subtypes reveals associations between stromal composition and prognosis in NSCLC

Abstract P6-04-08: Machine learning-based characterization of the breast cancer tumor microenvironment for assessment of neoadjuvant-treatment response

Abstract P4-09-08: AI-based quantitation of cancer cell and fibroblast nuclear morphology reflects transcriptomic heterogeneity and predicts survival in breast cancer

Abstract P5-02-09: Quantitative analysis of fiber-level collagen features in H&E whole-slide images predicts neoadjuvant therapy response in patients with HER2+ breast cancer

Abstract CT112: AI-powered and manual assessment of PD-L1 are comparable in predicting response to neoadjuvant atezolizumab in patients (pts) with resectable non-squamous, non-small cell lung cancer (NSCLC)

Abstract PD6-04: Deep-learning based prediction of homologous recombination deficiency (hrd) status from histological features in breast cancer; a research study

Abstract 2017: Association of digital and manual quantification of tumor PD-L1 expression with outcomes in nivolumab-treated patients

Abstract P5-02-02: Artificial intelligence powered predictive analysis of atypical ductal hyperplasia from digitized pathology images

EN1 Is a Transcriptional Dependency in Triple-Negative Breast Cancer Associated with Brain Metastasis

Abstract A05: Androgen receptor expression and breast cancer survival in the Nurses' Health Study cohorts

Morphoproteomic Characterization of Lung Squamous Cell Carcinoma Fragmentation, a Histological Marker of Increased Tumor Invasiveness

Aspirin Suppresses Growth in PI3K-Mutant Breast Cancer by Activating AMPK and Inhibiting mTORC1 Signaling

Plasma 25-Hydroxyvitamin D and Risk of Breast Cancer in Women Followed over 20 Years

Abstract PR07: Mechanisms of stromal reprogramming mediated by heat shock factor 1

Abstract 4229: Physical expansion of tissue microarrays for high-resolution imaging of normal and cancer samples with conventional microscopy

Abstract 2627: Molecular analyses of histopathologic morphologic features in breast cancer

Abstract 805: The molecular mechanisms of obesity driving breast cancer etiology and prognosis in post-menopausal women

Abstract 5477: MERIT40 is an Akt substrate that promotes resolution of DNA damage induced by chemotherapy

Abstract 2985: Systematic identification of sex-linked molecular alterations and therapeutic strategies in cancer

Abstract 3477: 3D morphological hallmarks of breast carcinogenesis: Diagnosis of non-invasive and invasive breast cancer with Lightsheet microscopy

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