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Amy J. French
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Journal Articles

Abstract 4924: Assessing microsatellite instability dominance in colorectal cancer phenotype: A multi-study initiative using multi-target transformers for genomic biomarker prediction

Marco Gustav, Marko van Treeck, Zunamys I. Carrero, Chiara M. Loeffler, Nic G. Reitsam, Bruno Märkl, Asier Rabasco Meneghetti, Lisa A. Boardman, Amy J. French, Ellen L. Goode, Andrea Gsur, Stefanie Brezina, Marc J. Gunter, Neil Murphy, Paul Limburg, Stephen Thibodeau, Sebastian Foersch, Robert Steinfelder, Tabitha Harrison, Ulrike Peters, Amanda Phipps, Jakob N. Kather
Journal: Cancer Research
Cancer Res (2024) 84 (6_Supplement): 4924.
https://doi.org/10.1158/1538-7445.AM2024-4924
Published: 22 March 2024
View article titled, Abstract 4924: Assessing microsatellite instability dominance in colorectal cancer phenotype: A multi-study initiative using multi-target transformers for genomic biomarker prediction
Journal Articles

Abstract 3039: Evaluation of intra-tumoral pks+ E. coli, enterotoxigenic B. fragilis and Fusobacterium nucleatum, overall and in early onset disease, in colorectal cancer cases

Meredith A. Hullar, Keith R. Curtis, Tabitha Harrison, Yi Lin, Robert Steinfelder, Sonja I. Berndt, Daniel D. Buchanan, Andrew T. Chan, David A. Drew, Jane Figueiredo, Amy J. French, Tabitha A. Harrison, Mark A. Jenkins, Johannes Melaku, Victor Moreno, Tomotaka Ugai, Shuji Ogino, Conghui Qu, Chenxu Qu, Steven Thibodeau, Syed Zaidi, Amanda I. Phipps, Ulrike Peters, on behalf of GECCO and CCFR investigators
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 3039.
https://doi.org/10.1158/1538-7445.AM2023-3039
Published: 04 April 2023
View article titled, Abstract 3039: Evaluation of intra-tumoral pks+ <em>E. coli</em>, enterotoxigenic <em>B. fragilis</em> and <em>Fusobacterium nucleatum,</em> overall and in early onset disease, in colorectal cancer cases
Journal Articles

Abstract PR008: Evaluation of intra-tumoral pathogenic bacteria pks+ E. coli, enterotoxigenic B. fragilis and fusobacterium nucleatum in 3695 colorectal cancer cases

Meredith A. J. Hullar, Keith R. Curtis, Tabitha A. Harrison, Yi Lin, Robert S. Steinfelder, Sonja I. Berndt, Daniel D. Buchanan, Andrew T. Chan, David Drew, Jane C. Figueiredo, Amy J. French, Ellen L. Goode, Mark A. Jenkins, Yohannes A. Melaku, Victor Moreno, Shuji Ogino, Stephen N. Thibideau, Amanda I. Phipps, Ulrike Peters
Journal: Cancer Research
Cancer Res (2022) 82 (23_Supplement_1): PR008.
https://doi.org/10.1158/1538-7445.CRC22-PR008
Published: 01 December 2022
View article titled, Abstract PR008: Evaluation of intra-tumoral pathogenic bacteria pks+ E. coli, enterotoxigenic B. fragilis and fusobacterium nucleatum in 3695 colorectal cancer cases
Journal Articles

Abstract 3652: Hormone therapy and incident colorectal cancer risk by ER beta protein expression level in a population-based cohort of older women.

Lori S. Tillmans, Robert A. Vierkant, Alice H. Wang, Charles F. Lynch, Kristin E. Anderson, Amy J. French, Robert W. Haile, John D. Potter, Susan L. Slager, Thomas C. Smyrk, Stephen N. Thibodeau, James R. Cerhan, Paul J. Limburg
Journal: Cancer Research
Cancer Res (2013) 73 (8_Supplement): 3652.
https://doi.org/10.1158/1538-7445.AM2013-3652
Published: 15 April 2013
View article titled, Abstract 3652: Hormone therapy and incident colorectal cancer risk by ER beta protein expression level in a population-based cohort of older women.
Journal Articles

Abstract 1151: cMYC amplification in colon cancer: A novel association with BRAF V600E and proficient DNA mismatch repair

Amy J. French, Daniel Sargent, Nathan Foster, Brian Kabat, Hilary Blair, Paul Limburg, Robert Vierkant, Alice Wang, Lori Tillmans, Stephen Thibodeau
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 1151.
https://doi.org/10.1158/1538-7445.AM2012-1151
Published: 15 April 2012
View article titled, Abstract 1151: <em>cMYC</em> amplification in colon cancer: A novel association with <em>BRAF</em> V600E and proficient DNA mismatch repair
Journal Articles

Abstract 4492: Colorectal cancer survival by molecular subtypes in a population-based cohort of older women

Robert Alan Vierkant, Lori S. Tillmans, Alice H. Wang, Niloy Jewel Samadder, Daniel J. Weisenberger, Peter W. Laird, Charles F. Lynch, Kristin E. Anderson, Amy J. French, Robert W. Haile, Lisa J. Harnack, John D. Potter, Susan L. Slager, Thomas C. Smyrk, Stephen N. Thibodeau, James R. Cerhan, Paul J. Limburg
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 4492.
https://doi.org/10.1158/1538-7445.AM2012-4492
Published: 15 April 2012
View article titled, Abstract 4492: Colorectal cancer survival by molecular subtypes in a population-based cohort of older women
Journal Articles

Abstract 5518: Clinicopathologic associations with colorectal cancer molecular pathways in a cohort study of older women

N Jewel Sammader, Robert A. Vierkant, Lori S. Tillmans, Alice H. Wang, Daniel J. Weisenberger, Peter W. Laird, Charles F. Lynch, Kristin E. Anderson, Amy J. French, Robert W. Haile, Lisa J. Harnack, John D. Potter, Susan L. Slager, Thomas C. Smyrk, Stephen N. Thibodeau, James R. Cerhan, Paul J. Limburg
Journal: Cancer Research
Cancer Res (2012) 72 (8_Supplement): 5518.
https://doi.org/10.1158/1538-7445.AM2012-5518
Published: 15 April 2012
View article titled, Abstract 5518: Clinicopathologic associations with colorectal cancer molecular pathways in a cohort study of older women
Journal Articles

Frequent Truncating Mutation of TFAM Induces Mitochondrial DNA Depletion and Apoptotic Resistance in Microsatellite-Unstable Colorectal Cancer

Jianhui Guo, Li Zheng, Wenyong Liu, Xianshu Wang, Zemin Wang, Zehua Wang, Amy J. French, Dongchon Kang, Lin Chen, Stephen N. Thibodeau, Wanguo Liu
Journal: Cancer Research
Cancer Res (2011) 71 (8): 2978–2987.
https://doi.org/10.1158/0008-5472.CAN-10-3482
Published: 13 April 2011
View article titled, Frequent Truncating Mutation of <em>TFAM</em> Induces Mitochondrial DNA Depletion and Apoptotic Resistance in Microsatellite-Unstable Colorectal Cancer
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Includes: Supplementary data
Journal Articles

Frequency of defective DNA mismatch repair in colon cancer among the Alaska Native population

Amy J. French, Lisa A. Boardman, Anne P. Lanier, Kathy Koller, Lawrence J. Burgart, Shannon K. McDonnell, Daniel J. Schaid, Stephen N. Thibodeau
Journal: Cancer Research
Cancer Res (2006) 66 (8_Supplement): 872.
Published: 15 April 2006
View article titled, Frequency of defective DNA mismatch repair in colon cancer among the Alaska Native population
Journal Articles

Survival differences in patients with defective mismatch repair by BRAF mutational status

Amy J. French, Michelle R. Mahoney, Daniel J. Sargent, Lawrence J. Burgart, Richard Goldberg, Stephen N. Thibodeau
Journal: Cancer Research
Cancer Res (2006) 66 (8_Supplement): 91.
Published: 15 April 2006
View article titled, Survival differences in patients with defective mismatch repair by BRAF mutational status
Journal Articles

Array based comparative genomic hybridization analysis of microsatellite unstable sporadic colon cancers

Karolin Trautmann-Grill, Jonathan P. Terdiman, Ritu Roydasgupta, Sanjay Karkar, Amy J. French, Erich Jaeger, Jane Fridlyand, Stephan N. Thibodeau, Frederic M. Waldman
Journal: Cancer Research
Cancer Res (2006) 66 (8_Supplement): 615.
Published: 15 April 2006
View article titled, Array based comparative genomic hybridization analysis of microsatellite unstable sporadic colon cancers
Journal Articles

Loss of expression of zymogen granule protein 16 in colorectal cancer

Liang Wang, Dieter Hahnloser, Lisa A. Boardman, Lawrence J. Burgart, Amy J. French, Stephen N. Thibodeau
Journal: Cancer Research
Cancer Res (2005) 65 (9_Supplement): 452.
Published: 01 May 2005
View article titled, Loss of expression of zymogen granule protein 16 in colorectal cancer
Journal Articles

Biallelic germline mutations in MYH occur in young onset colorectal cancer patients without polyps as well as in individuals with attenuated and classical colonic polyposis.

Liang Wang, Linnea M. Baudhuin, Lisa A. Boardman, Kelle J. Steenblock, Gloria M. Peterson, Kevin C. Halling, Amy J. French, Ruth A. Johnson, Lawrence J. Burgart, Kari Rabe, Noralane M. Lindor, Stephen N. Thibodeau
Journal: Cancer Research
Cancer Res (2004) 64 (7_Supplement): 523–524.
Published: 01 April 2004
View article titled, Biallelic germline mutations in MYH occur in young onset colorectal cancer patients without polyps as well as in individuals with attenuated and classical colonic polyposis.
Journal Articles

BRAF Mutations in Colon Cancer Are Not Likely Attributable to Defective DNA Mismatch Repair

Liang Wang, Julie M. Cunningham, Jennifer L. Winters, Jennifer C. Guenther, Amy J. French, Lisa A. Boardman, Lawrence J. Burgart, Shannon K. McDonnell, Daniel J. Schaid, Stephen N. Thibodeau
Journal: Cancer Research
Cancer Res (2003) 63 (17): 5209–5212.
Published: 18 September 2003
View article titled, <em>BRAF</em> Mutations in Colon Cancer Are Not Likely Attributable to Defective DNA Mismatch Repair
Open the PDF for <em>BRAF</em> Mutations in Colon Cancer Are Not Likely Attributable to Defective DNA Mismatch Repair in another window
Journal Articles

hMSH6 Alterations in Patients with Microsatellite Instability-Low Colorectal Cancer

Yann R. Parc, Kevin C. Halling, Liang Wang, Eric R. Christensen, Julie M. Cunningham, Amy J. French, Lawrence J. Burgart, Tammy L. Price-Troska, Patrick C. Roche, Stephen N. Thibodeau
Journal: Cancer Research
Cancer Res (2000) 60 (8): 2225–2231.
Published: 01 April 2000
View article titled, <em>hMSH6</em> Alterations in Patients with Microsatellite Instability-Low Colorectal Cancer
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Journal Articles

Microsatellite Instability in Colorectal Cancer: Different Mutator Phenotypes and the Principal Involvement of hMLH1

Stephen N. Thibodeau, Amy J. French, Julie M. Cunningham, David Tester, Lawrence J. Burgart, Patrick C. Roche, Shannon K. McDonnell, Daniel J. Schaid, Catherine Walsh Vockley, Virginia V. Michels, Gist H. Farr, Jr., Michael J. O'Connell
Journal: Cancer Research
Cancer Res (1998) 58 (8): 1713–1718.
Published: 01 April 1998
View article titled, Microsatellite Instability in Colorectal Cancer: Different Mutator Phenotypes and the Principal Involvement of <em>hMLH1</em>
Open the PDF for Microsatellite Instability in Colorectal Cancer: Different Mutator Phenotypes and the Principal Involvement of <em>hMLH1</em> in another window
Journal Articles

Altered Expression of hMSH2 and hMLH1 in Tumors with Microsatellite Instability and Genetic Alterations in Mismatch Repair Genes

Stephen N. Thibodeau, Amy J. French, Patrick C. Roche, Julie M. Cunningham, David J. Tester, Noralane M. Lindor, Gabriela Moslein, Sean M. Baker, R. Michael Liskay, Lawrence J. Burgart, Ronald Honchel, Kevin C. Halling
Journal: Cancer Research
Cancer Res (1996) 56 (21): 4836–4840.
Published: 01 November 1996
View article titled, Altered Expression of hMSH2 and hMLH1 in Tumors with Microsatellite Instability and Genetic Alterations in Mismatch Repair Genes
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