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Abbas Shirinifard
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Journal Articles

Abstract 3163: Ontology guided navigation of somatic variants, mutational signatures, gene expression and histology images for pediatric cancer

Alexander M. Gout, Stephanie Sandor, Delaram Rahbarinia, Jobin Sunny, James Madson, Lucian Vacaroiu, Wentao Yang, Ben Lansdell, Michael Macias, Samuel W. Brady, David Finkelstein, Victor Pastor, Kevin Benton, Andrew Frantz, Mark R. Wilkinson, Cynthia Cline, Brent A. Orr, Abbas Shirinifard, Elizabeth Stewart, Michael Rusch, Xin Zhou, Michael Dyer, David A. Wheeler, Clay McLeod, Jinghui Zhang
Journal: Cancer Research
Cancer Res (2023) 83 (7_Supplement): 3163.
https://doi.org/10.1158/1538-7445.AM2023-3163
Published: 04 April 2023
View article titled, Abstract 3163: Ontology guided navigation of somatic variants, mutational signatures, gene expression and histology images for pediatric cancer
Journal Articles

Matricellular Protein WISP2 Is an Endogenous Inhibitor of Collagen Linearization and Cancer Metastasis

Jagadeesh Janjanam, Glendin Pano, Ruishan Wang, Benjamin A. Minden-Birkenmaier, Hannah Breeze-Jones, Eleanor Baker, Cecile Garcin, Georgia Clayton, Abbas Shirinifard, Ana Maria Zaske, David Finkelstein, Myriam Labelle
Journal: Cancer Research
Cancer Res (2021) 81 (22): 5666–5677.
https://doi.org/10.1158/0008-5472.CAN-20-3982
Published: 15 November 2021
View article titled, Matricellular Protein WISP2 Is an Endogenous Inhibitor of Collagen Linearization and Cancer Metastasis
Open the PDF for Matricellular Protein WISP2 Is an Endogenous Inhibitor of Collagen Linearization and Cancer Metastasis in another window
Includes: Supplementary data
Journal Articles

Abstract A33: An individualized predictive 3D model of tumor response to topotecan for a patient-derived orthotopic xenograft model of pediatric neuroblastoma

Abbas Shirinifard, Suresh Thiagarajan, Yogesh T. Patel, Abigail D. Davis, Megan O. Jacus, Jessica Roberts, Clinton F. Stewart, András Sablauer
Journal: Cancer Research
Cancer Res (2017) 77 (2_Supplement): A33.
https://doi.org/10.1158/1538-7445.EPSO16-A33
Published: 16 January 2017
View article titled, Abstract A33: An individualized predictive 3D model of tumor response to topotecan for a patient-derived orthotopic xenograft model of pediatric neuroblastoma
Journal Articles

Abstract 2708: Development of an individualized 3D transport model of topotecan for a patient-derived orthotopic xenograft model of pediatric neuroblastoma

Abbas Shirinifard, Suresh Thiagarajan, Yogesh T. Patel, Abigail D. Davis, Megan O. Jacus, Stacy L. Throm, Jessica Roberts, Vinay Daryani, Clinton F. Stewart, András Sablauer.
Journal: Cancer Research
Cancer Res (2016) 76 (14_Supplement): 2708.
https://doi.org/10.1158/1538-7445.AM2016-2708
Published: 15 July 2016
View article titled, Abstract 2708: Development of an individualized 3D transport model of topotecan for a patient-derived orthotopic xenograft model of pediatric neuroblastoma
Journal Articles

Abstract 4519: Development of a whole body physiologically-based pharmacokinetic (PBPK) model with individualized tumor compartment for topotecan (TPT) in mice bearing neuroblastoma (NB)

Yogesh T. Patel, Megan O. Jacus, Abbas Shirinifard, Abigail D. Davis, Suresh Thiagarajan, Stacy L. Throm, Vinay M. Daryani, Andras Sablauer, Clinton F. Stewart
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 4519.
https://doi.org/10.1158/1538-7445.AM2015-4519
Published: 01 August 2015
View article titled, Abstract 4519: Development of a whole body physiologically-based pharmacokinetic (PBPK) model with individualized tumor compartment for topotecan (TPT) in mice bearing neuroblastoma (NB)
Journal Articles

Abstract 1495: Quantification of blood perfusion in rhabdomyosarcoma xenograft in 3D using contrast-enhanced ultrasound imaging

Abbas Shirinifard, Suresh Thiagarajan, András Sablauer
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 1495.
https://doi.org/10.1158/1538-7445.AM2015-1495
Published: 01 August 2015
View article titled, Abstract 1495: Quantification of blood perfusion in rhabdomyosarcoma xenograft in 3D using contrast-enhanced ultrasound imaging
Journal Articles

Abstract 1496: Quantification of tumor blood perfusion of an orthotopic mouse model of neuroblastoma using nonlinear contrast-enhanced ultrasound imaging

Suresh Thiagarajan, Abbas Shirinifard, Megan O. Jacus, Abigail D. Davis, Yogesh T. Patel, Stacy L. Throm, Vinay Daryani, Clinton F. Stewart, András Sablauer
Journal: Cancer Research
Cancer Res (2015) 75 (15_Supplement): 1496.
https://doi.org/10.1158/1538-7445.AM2015-1496
Published: 01 August 2015
View article titled, Abstract 1496: Quantification of tumor blood perfusion of an orthotopic mouse model of neuroblastoma using nonlinear contrast-enhanced ultrasound imaging