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Volume 79, Issue 7
1 April 2019
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  • Cover Image

    Cover Image

    issue cover
    The image is a photograph of strands of DNA from primary mouse B cells isolated from Zranb3- or Smarcal1-deficient Eμ-myc transgenic mice pulse-labeled with IdU (red) and CldU (green) detected by immunofluorescence and microscopy. The technique is called DNA fiber labeling. For details, see article by Puccetti and colleagues on page 1612.
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ISSN 0008-5472
EISSN 1538-7445

Cancer Research

Table of Contents


Breaking Insights

Highlights from Recent Cancer Literature
View articletitled, Highlights from Recent Cancer Literature
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Reviews

Author Choice
An Interactive Resource to Probe Genetic Diversity and Estimated Ancestry in Cancer Cell Lines
Julie Dutil; Zhihua Chen; Alvaro N. Monteiro; Jamie K. Teer; Steven A. Eschrich
View articletitled, An Interactive Resource to Probe Genetic Diversity and Estimated Ancestry in Cancer Cell Lines
Supplementary data
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Citrullination in Cancer
Arseniy E. Yuzhalin
View articletitled, Citrullination in Cancer
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The Critical Role of RNA m6A Methylation in Cancer
Qing Lan; Pei Y. Liu; Jacob Haase; Jessica L. Bell; Stefan Hüttelmaier; Tao Liu
View articletitled, The Critical Role of RNA m<sup>6</sup>A Methylation in Cancer
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Cancer Research Highlights

Exosomal miRNA Cargo as Mediator of Immune Escape Mechanisms in Neuroblastoma
Thomas D. Schmittgen
View articletitled, Exosomal miRNA Cargo as Mediator of Immune Escape Mechanisms in Neuroblastoma
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Homeostatic Roles of STING in Cell Proliferation and Chromosomal Instability
David Gius; Yueming Zhu
View articletitled, Homeostatic Roles of STING in Cell Proliferation and Chromosomal Instability
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Remodeling Collapsed DNA Replication Forks for Cancer Development
Sotirios K. Sotiriou; Thanos D. Halazonetis
View articletitled, Remodeling Collapsed DNA Replication Forks for Cancer Development
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Going Beyond the Sequences: TCR Binding Patterns at the Service of Cancer Detection
Vincent Zoete; George Coukos
View articletitled, Going Beyond the Sequences: TCR Binding Patterns at the Service of Cancer Detection
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Several Faces of Glutaminase Regulation in Cells
Ana C.P. Mafra; Sandra M.G. Dias
View articletitled, Several Faces of Glutaminase Regulation in Cells
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Genome and Epigenome

Genome-Wide Screening and Functional Analysis Identifies Tumor Suppressor Long Noncoding RNAs Epigenetically Silenced in Hepatocellular Carcinoma
Feiyue Xu; Chi Han Li; Chi Hin Wong; George G. Chen; Paul Bo San Lai; Shengwen Shao; Stephen L. Chan; Yangchao Chen
View articletitled, Genome-Wide Screening and Functional Analysis Identifies Tumor Suppressor Long Noncoding RNAs Epigenetically Silenced in Hepatocellular Carcinoma
Supplementary data
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Landscape of Germline and Somatic Mitochondrial DNA Mutations in Pediatric Malignancies
Petr Triska; Kristiyana Kaneva; Daria Merkurjev; Noor Sohail; Marni J. Falk; Timothy J. Triche, Jr; Jaclyn A. Biegel; Xiaowu Gai
View articletitled, Landscape of Germline and Somatic Mitochondrial DNA Mutations in Pediatric Malignancies
Supplementary data
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Metabolism and Chemical Biology

p300 Mediates Muscle Wasting in Lewis Lung Carcinoma
Thomas K. Sin; James Z. Zhu; Guohua Zhang; Yi-Ping Li
View articletitled, p300 Mediates Muscle Wasting in Lewis Lung Carcinoma
Supplementary data
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Author Choice
Tumor pH and Protein Concentration Contribute to the Signal of Amide Proton Transfer Magnetic Resonance Imaging
Kevin J. Ray; Manon A. Simard; James R. Larkin; James Coates; Paul Kinchesh; Sean C. Smart; Geoff S. Higgins; Michael A. Chappell; Nicola R. Sibson
View articletitled, Tumor pH and Protein Concentration Contribute to the Signal of Amide Proton Transfer Magnetic Resonance Imaging
Supplementary data
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Cytochrome c Deficiency Confers Apoptosome and Mitochondrial Dysfunction in African-American Men with Prostate Cancer
Rahul Kumar; Tariq A. Bhat; Elise M. Walsh; Ajay K. Chaudhary; Jordan O'Malley; Johng S. Rhim; Jianmin Wang; Carl D. Morrison; Kristopher Attwood; Wiam Bshara; James L. Mohler; Neelu Yadav; Dhyan Chandra
View articletitled, Cytochrome <em>c</em> Deficiency Confers Apoptosome and Mitochondrial Dysfunction in African-American Men with Prostate Cancer
Supplementary data
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Interplay between TRAP1 and Sirtuin-3 Modulates Mitochondrial Respiration and Oxidative Stress to Maintain Stemness of Glioma Stem Cells
Hye-Kyung Park; Jun-Hee Hong; Young Taek Oh; Sung Soo Kim; Jinlong Yin; An-Jung Lee; Young Chan Chae; Jong Heon Kim; Sung-Hye Park; Chul-Kee Park; Myung-Jin Park; Jong Bae Park; Byoung Heon Kang
View articletitled, Interplay between TRAP1 and Sirtuin-3 Modulates Mitochondrial Respiration and Oxidative Stress to Maintain Stemness of Glioma Stem Cells
Supplementary data
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Author Choice
PAK4 Phosphorylates Fumarase and Blocks TGFβ-Induced Cell Growth Arrest in Lung Cancer Cells
Tao Chen; Ting Wang; Wenhua Liang; Qin Zhao; Qiujing Yu; Chun-Min Ma; Lingang Zhuo; Dong Guo; Ke Zheng; Chengzhi Zhou; Shupei Wei; Wenhua Huang; Juhong Jiang; Jing Liu; Shiyue Li; Jianxing He; Yuhui Jiang; Nanshan Zhong
View articletitled, PAK4 Phosphorylates Fumarase and Blocks TGFβ-Induced Cell Growth Arrest in Lung Cancer Cells
Supplementary data
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Molecular Cell Biology

Nutrient Stress–Dysregulated Antisense lncRNA GLS-AS Impairs GLS-Mediated Metabolism and Represses Pancreatic Cancer Progression
Shi-Jiang Deng; Heng-Yu Chen; Zhu Zeng; Shichang Deng; Shuai Zhu; Zeng Ye; Chi He; Ming-Liang Liu; Kang Huang; Jian-Xin Zhong; Feng-Yu Xu; Qiang Li; Yang Liu; Chunyou Wang; Gang Zhao
View articletitled, Nutrient Stress–Dysregulated Antisense lncRNA GLS-AS Impairs GLS-Mediated Metabolism and Represses Pancreatic Cancer Progression
Supplementary data
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Loss of FOXP3 and TSC1 Accelerates Prostate Cancer Progression through Synergistic Transcriptional and Posttranslational Regulation of c-MYC
Lianpin Wu; Baozhu Yi; Shi Wei; Dapeng Rao; Youhua He; Gurudatta Naik; Sejong Bae; Xiaoguang M. Liu; Wei-Hsiung Yang; Guru Sonpavde; Runhua Liu; Lizhong Wang
View articletitled, Loss of FOXP3 and TSC1 Accelerates Prostate Cancer Progression through Synergistic Transcriptional and Posttranslational Regulation of c-MYC
Supplementary data
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Author Choice
Disruption of Endolysosomal RAB5/7 Efficiently Eliminates Colorectal Cancer Stem Cells
Mitsunobu Takeda; Jun Koseki; Hidekazu Takahashi; Norikatsu Miyoshi; Naohiro Nishida; Junichi Nishimura; Taishi Hata; Chu Matsuda; Tsunekazu Mizushima; Hirofumi Yamamoto; Hideshi Ishii; Yuichiro Doki; Masaki Mori; Naotsugu Haraguchi
View articletitled, Disruption of Endolysosomal RAB5/7 Efficiently Eliminates Colorectal Cancer Stem Cells
Supplementary data
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Author Choice
4E-BP1 Is a Tumor Suppressor Protein Reactivated by mTOR Inhibition in Head and Neck Cancer
Zhiyong Wang; Xiaodong Feng; Alfredo A. Molinolo; Daniel Martin; Lynn Vitale-Cross; Nijiro Nohata; Mizuo Ando; Amy Wahba; Panomwat Amornphimoltham; Xingyu Wu; Mara Gilardi; Michael Allevato; Victoria Wu; Dana J. Steffen; Philip Tofilon; Nahum Sonenberg; Joseph Califano; Qianming Chen; Scott M. Lippman; J. Silvio Gutkind
View articletitled, 4E-BP1 Is a Tumor Suppressor Protein Reactivated by mTOR Inhibition in Head and Neck Cancer
Supplementary data
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Author Choice
YY1 Complex Promotes Quaking Expression via Super-Enhancer Binding during EMT of Hepatocellular Carcinoma
Jingxia Han; Jing Meng; Shuang Chen; Xiaorui Wang; Shan Yin; Qiang Zhang; Huijuan Liu; Rong Qin; Zhongwei Li; Weilong Zhong; Chao Zhang; Heng Zhang; Yuanhao Tang; Tingting Lin; Wanfeng Gao; Xiaoyun Zhang; Lan Yang; Yanrong Liu; Hong-gang Zhou; Tao Sun; Cheng Yang

These findings identify the YY1/p65/p300 complex as a regulator of QKI expression, identifying several potential therapeutic targets for the treatment of HCC.

View articletitled, YY1 Complex Promotes Quaking Expression via Super-Enhancer Binding during EMT of Hepatocellular Carcinoma
Supplementary data
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STING Promotes Homeostasis via Regulation of Cell Proliferation and Chromosomal Stability
Diana Rose E. Ranoa; Ryan C. Widau; Stephen Mallon; Akash D. Parekh; Claudia M. Nicolae; Xiaona Huang; Michael J. Bolt; Ainhoa Arina; Renate Parry; Stephen J. Kron; George-Lucian Moldovan; Nikolai N. Khodarev; Ralph R. Weichselbaum
View articletitled, STING Promotes Homeostasis via Regulation of Cell Proliferation and Chromosomal Stability
Supplementary data
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Tumor Biology and Immunology

Author Choice
An Orally Active Galectin-3 Antagonist Inhibits Lung Adenocarcinoma Growth and Augments Response to PD-L1 Blockade
Lynda Vuong; Eleni Kouverianou; Claire M. Rooney; Brian J. McHugh; Sarah E.M. Howie; Christopher D. Gregory; Stuart J. Forbes; Neil C. Henderson; Fredrik R. Zetterberg; Ulf J. Nilsson; Hakon Leffler; Paul Ford; Anders Pedersen; Lise Gravelle; Susan Tantawi; Hans Schambye; Tariq Sethi; Alison C. MacKinnon
View articletitled, An Orally Active Galectin-3 Antagonist Inhibits Lung Adenocarcinoma Growth and Augments Response to PD-L1 Blockade
Supplementary data
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Anti–PD-L1 Treatment Results in Functional Remodeling of the Macrophage Compartment
Huizhong Xiong; Stephanie Mittman; Ryan Rodriguez; Marina Moskalenko; Patricia Pacheco-Sanchez; Yagai Yang; Dorothee Nickles; Rafael Cubas
View articletitled, Anti–PD-L1 Treatment Results in Functional Remodeling of the Macrophage Compartment
Supplementary data
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Cognate Nonlytic Interactions between CD8+ T Cells and Breast Cancer Cells Induce Cancer Stem Cell–like Properties
Roland G. Stein; Stefan Ebert; Laura Schlahsa; Claus J. Scholz; Matthias Braun; Petra Hauck; Evi Horn; Camelia-Maria Monoranu; Vincent J. Thiemann; Michael P. Wustrow; Sebastian F. Häusler; Itsaso Montalbán del Barrio; Tanja N. Stüber; Matthias Wölfl; Johannes Dietl; Andreas Rosenwald; Joachim E. Diessner; Achim Wöckel; Jörg Wischhusen
View articletitled, Cognate Nonlytic Interactions between CD8<sup>+</sup> T Cells and Breast Cancer Cells Induce Cancer Stem Cell–like Properties
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Tumor Suppressor miRNA-204-5p Regulates Growth, Metastasis, and Immune Microenvironment Remodeling in Breast Cancer
Bok Sil Hong; Han Suk Ryu; Namshin Kim; Jisun Kim; Eunshin Lee; Hyunhye Moon; Kyoung Hyoun Kim; Min-Sun Jin; Nam Hoon Kwon; Sunghoon Kim; Donghyun Kim; Doo Hyun Chung; Kyeonghun Jeong; Kwangsoo Kim; Ki Yoon Kim; Han-Byoel Lee; Wonshik Han; Jihui Yun; Jong-Il Kim; Dong-Young Noh; Hyeong-Gon Moon
View articletitled, Tumor Suppressor miRNA-204-5p Regulates Growth, Metastasis, and Immune Microenvironment Remodeling in Breast Cancer
Supplementary data
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Author Choice
Pomalidomide Alters Pancreatic Macrophage Populations to Generate an Immune-Responsive Environment at Precancerous and Cancerous Lesions
Ligia I. Bastea; Geou-Yarh Liou; Veethika Pandey; Alicia K. Fleming; Christina A. von Roemeling; Heike Doeppler; Zhimin Li; Yushi Qiu; Brandy Edenfield; John A. Copland; Han W. Tun; Peter Storz
View articletitled, Pomalidomide Alters Pancreatic Macrophage Populations to Generate an Immune-Responsive Environment at Precancerous and Cancerous Lesions
Supplementary data
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Author Choice
Whole Genome–Derived Tiled Peptide Arrays Detect Prediagnostic Autoantibody Signatures in Non–Small-Cell Lung Cancer
Yuanqing Yan; Nan Sun; Hong Wang; Makoto Kobayashi; Jon J. Ladd; James P. Long; Ken C. Lo; Jigar Patel; Eric Sullivan; Thomas Albert; Gary E. Goodman; Kim-Anh Do; Samir M. Hanash
View articletitled, Whole Genome–Derived Tiled Peptide Arrays Detect Prediagnostic Autoantibody Signatures in Non–Small-Cell Lung Cancer
Supplementary data
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CCL27/CCL28–CCR10 Chemokine Signaling Mediates Migration of Lymphatic Endothelial Cells
Tara Karnezis; Rae H. Farnsworth; Nicole C. Harris; Steven P. Williams; Carol Caesar; David J. Byrne; Prad Herle; Maria L. Macheda; Ramin Shayan; You-Fang Zhang; Sezer Yazar; Simon J. Takouridis; Craig Gerard; Stephen B. Fox; Marc G. Achen; Steven A. Stacker
View articletitled, CCL27/CCL28–CCR10 Chemokine Signaling Mediates Migration of Lymphatic Endothelial Cells
Supplementary data
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Cervical Cancer–Instructed Stromal Fibroblasts Enhance IL23 Expression in Dendritic Cells to Support Expansion of Th17 Cells
Barbara Walch-Rückheim; Russalina Ströder; Laura Theobald; Jennifer Pahne-Zeppenfeld; Subramanya Hegde; Yoo-Jin Kim; Rainer Maria Bohle; Ingolf Juhasz-Böss; Erich-Franz Solomayer; Sigrun Smola
View articletitled, Cervical Cancer–Instructed Stromal Fibroblasts Enhance IL23 Expression in Dendritic Cells to Support Expansion of Th17 Cells
Supplementary data
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RIPK3-Induced Inflammation by I-MDSCs Promotes Intestinal Tumors
Asha Jayakumar; Alfred L.M. Bothwell
View articletitled, RIPK3-Induced Inflammation by I-MDSCs Promotes Intestinal Tumors
Supplementary data
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Nod1 Imprints Inflammatory and Carcinogenic Responses toward the Gastric Pathogen Helicobacter pylori
Giovanni Suarez; Judith Romero-Gallo; Maria B. Piazuelo; Johanna C. Sierra; Alberto G. Delgado; M. Kay Washington; Shailja C. Shah; Keith T. Wilson; Richard M. Peek, Jr
View articletitled, Nod1 Imprints Inflammatory and Carcinogenic Responses toward the Gastric Pathogen <em>Helicobacter pylori</em>
Supplementary data
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Smarcal1 and Zranb3 Protect Replication Forks from Myc-Induced DNA Replication Stress
Matthew V. Puccetti; Clare M. Adams; Saul Kushinsky; Christine M. Eischen
View articletitled, Smarcal1 and Zranb3 Protect Replication Forks from Myc-Induced DNA Replication Stress
Supplementary data
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Local Delivery of Ox40l, Cd80, and Cd86 mRNA Kindles Global Anticancer Immunity
Ole Audun Werner Haabeth; Timothy R. Blake; Colin J. McKinlay; Anders A. Tveita; Adrienne Sallets; Robert M. Waymouth; Paul A. Wender; Ronald Levy
View articletitled, Local Delivery of <em>Ox40l</em>, <em>Cd80</em>, and <em>Cd86</em> mRNA Kindles Global Anticancer Immunity
Supplementary data
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Eomes+T-betlow CD8+ T Cells Are Functionally Impaired and Are Associated with Poor Clinical Outcome in Patients with Acute Myeloid Leukemia
Bei Jia; Chenchen Zhao; Kevin L. Rakszawski; David F. Claxton; W. Christopher Ehmann; Witold B. Rybka; Shin Mineishi; Ming Wang; Hiroko Shike; Michael G. Bayerl; Jeffrey M. Sivik; Todd D. Schell; Joseph J. Drabick; Raymond J. Hohl; Hong Zheng
View articletitled, Eomes<sup>+</sup>T-bet<sup>low</sup> CD8<sup>+</sup> T Cells Are Functionally Impaired and Are Associated with Poor Clinical Outcome in Patients with Acute Myeloid Leukemia
Supplementary data
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Translational Science

Author Choice
MNK1/NODAL Signaling Promotes Invasive Progression of Breast Ductal Carcinoma In Situ
Qianyu Guo; Vivian Z. Li; Jessica N. Nichol; Fan Huang; William Yang; Samuel E.J. Preston; Zahra Talat; Hanne Lefrère; Henry Yu; Guihua Zhang; Mark Basik; Christophe Gonçalves; Yao Zhan; Dany Plourde; Jie Su; Jose Torres; Maud Marques; Sara Al Habyan; Krikor Bijian; Frédéric Amant; Michael Witcher; Fariba Behbod; Luke McCaffrey; Moulay Alaoui-Jamali; Nadia V. Giannakopoulos; Muriel Brackstone; Lynne-Marie Postovit; Sonia V. del Rincón; Wilson H. Miller, Jr
View articletitled, MNK1/NODAL Signaling Promotes Invasive Progression of Breast Ductal Carcinoma <em>In Situ</em>
Supplementary data
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Epithelial-to-Mesenchymal Transition Is a Mechanism of ALK Inhibitor Resistance in Lung Cancer Independent of ALK Mutation Status
Koji Fukuda; Shinji Takeuchi; Sachiko Arai; Ryohei Katayama; Shigeki Nanjo; Azusa Tanimoto; Akihiro Nishiyama; Takayuki Nakagawa; Hirokazu Taniguchi; Takeshi Suzuki; Tadaaki Yamada; Hiroshi Nishihara; Hironori Ninomiya; Yuichi Ishikawa; Satoko Baba; Kengo Takeuchi; Atsushi Horiike; Noriko Yanagitani; Makoto Nishio; Seiji Yano
View articletitled, Epithelial-to-Mesenchymal Transition Is a Mechanism of ALK Inhibitor Resistance in Lung Cancer Independent of <em>ALK</em> Mutation Status
Supplementary data
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Author Choice
Biophysicochemical Motifs in T-cell Receptor Sequences Distinguish Repertoires from Tumor-Infiltrating Lymphocyte and Adjacent Healthy Tissue
Jared Ostmeyer; Scott Christley; Inimary T. Toby; Lindsay G. Cowell
View articletitled, Biophysicochemical Motifs in T-cell Receptor Sequences Distinguish Repertoires from Tumor-Infiltrating Lymphocyte and Adjacent Healthy Tissue
Supplementary data
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Metastatic Tumor-in-a-Dish, a Novel Multicellular Organoid to Study Lung Colonization and Predict Therapeutic Response
Prabhu Ramamoorthy; Sufi Mary Thomas; Gaurav Kaushik; Dharmalingam Subramaniam; Katherine M. Chastain; Animesh Dhar; Ossama Tawfik; Anup Kasi; Weijing Sun; Satish Ramalingam; Sumedha Gunewardena; Shahid Umar; Joshua M. Mammen; Subhash B. Padhye; Scott J. Weir; Roy A. Jensen; G. Sitta Sittampalam; Shrikant Anant
View articletitled, Metastatic Tumor-in-a-Dish, a Novel Multicellular Organoid to Study Lung Colonization and Predict Therapeutic Response
Supplementary data
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Convergence and Technologies

Transcriptomics Associates Molecular Features with 18F-Fluorocholine PET/CT Imaging Phenotype and Its Potential Relationship to Survival in Hepatocellular Carcinoma
Sandi A. Kwee; Maarit Tiirikainen; Miles M. Sato; Jared D. Acoba; Runmin Wei; Wei Jia; Loic Le Marchand; Linda L. Wong
View articletitled, Transcriptomics Associates Molecular Features with <sup>18</sup>F-Fluorocholine PET/CT Imaging Phenotype and Its Potential Relationship to Survival in Hepatocellular Carcinoma
Supplementary data
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Population and Prevention Science

A miRNA Expression Signature in Breast Tumor Tissue Is Associated with Risk of Distant Metastasis
Thomas E. Rohan; Tao Wang; Sheila Weinmann; Yihong Wang; Juan Lin; Mindy Ginsberg; Olivier Loudig
View articletitled, A miRNA Expression Signature in Breast Tumor Tissue Is Associated with Risk of Distant Metastasis
Supplementary data
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Corrections

Correction: Reduced CD160 Expression Contributes to Impaired NK-cell Function and Poor Clinical Outcomes in Patients with HCC
Haoyu Sun; Jing Xu; Qiang Huang; Mei Huang; Kun Li; Kun Qu; Hao Wen; Renyong Lin; Meijuan Zheng; Haiming Wei; Weihua Xiao; Rui Sun; Zhigang Tian; Cheng Sun
View articletitled, Correction: Reduced CD160 Expression Contributes to Impaired NK-cell Function and Poor Clinical Outcomes in Patients with HCC
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Correction: SIX1 Promotes Tumor Lymphangiogenesis by Coordinating TGFβ Signals That Increase Expression of VEGF-C
Dan Liu; Li Li; Xiao-Xue Zhang; Dong-Yi Wan; Bi-Xin Xi; Zheng Hu; Wen-Cheng Ding; Da Zhu; Xiao-Li Wang; Wei Wang; Zuo-Hua Feng; Hui Wang; Ding Ma; Qing-Lei Gao
View articletitled, Correction: SIX1 Promotes Tumor Lymphangiogenesis by Coordinating TGFβ Signals That Increase Expression of VEGF-C
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Editor’s Note

Editor's Note: From the Cyclooxygenase-2 Inhibitor Celecoxib to a Novel Class of 3-Phosphoinositide-Dependent Protein Kinase-1 Inhibitors
Jiuxiang Zhu; Jui-Wen Huang; Ping-Hui Tseng; Ya-Ting Yang; Joseph Fowble; Chung-Wai Shiau; Yeng-Jeng Shaw; Samuel K. Kulp; Ching-Shih Chen
View articletitled, Editor's Note: From the Cyclooxygenase-2 Inhibitor Celecoxib to a Novel Class of 3-Phosphoinositide-Dependent Protein Kinase-1 Inhibitors
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Journal Archive


Cancer Research

(1941-Present; volumes 1-current)

Published twice monthly since 1987. From 1941-1986, published monthly.
(ISSN 0008-5472)

The American Journal of Cancer

(1931-1940; volumes 15-40)

Published quarterly in 1931, bimonthly in 1932, and monthly from 1933 to 1940. The journal changed title to Cancer Research in 1941.
(ISSN 0099-7374)

The Journal of Cancer Research

(1916-1930); volumes 1-14)

Published quarterly from 1916 through 1930 (publication was suspended from November 1922 to March 1924). The journal changed title to The American Journal of Cancer in 1931.
(ISSN 0099-7013)

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