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1 November 2021
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Cover Image
Cover Image
Multiplex immunofluorescence (mIF) is a powerful technology that enables visualization of the spatial relationships between cells in the tumor microenvironment (TME). Using tumor tissue from 93 patients with metastatic melanoma, Giraldo et al. developed and validated a mIF data-analysis pipeline and spatial uniform manifold approximation and projection (UMAP) algorithm to cluster and visualize the data. This approach revealed that PD-L1 and PD-1 expression intensity was spatially encoded in the TME. For example, PD-L1 expression intensity was highest on CD163+ cells in neighborhoods with a high density of CD8+ cells. The differences in spatial clustering correlated with distinct clinical outcomes, highlighting the potential for using this approach to identify prognostic and predictive immuno-oncology biomarkers. Read more in this issue on page 1262. Original image from Fig. 1B. Artwork by Lewis Long. - PDF Icon PDF LinkTable of Contents
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ISSN 2326-6066
EISSN 2326-6074
Issue Sections
Journal Archive
Cancer Immunology Research (2013-Present)
(ISSN 2326-6066) Published monthly since 2013.Cancer Immunity (2001-2013; volumes 1-13)
(EISSN 1424-9634) Published periodically from 2001-2013.Table of Contents
What We’re Reading
Obituary
Commentary
Supporting the Next Generation of Scientists to Lead Cancer Immunology Research
Elise Alspach; Ryan D. Chow; Shadmehr Demehri; Jennifer L. Guerriero; Shashi Gujar; Felix J. Hartmann; Beth A. Helmink; William H. Hudson; Won Jin Ho; Leyuan Ma; Barbara B. Maier; Vivien I. Maltez; Brian C. Miller; Amy E. Moran; Erin M. Parry; Padmini S. Pillai; Sarwish Rafiq; Miguel Reina-Campos; Pamela C. Rosato; Nils-Petter Rudqvist; Megan K. Ruhland; Idit Sagiv-Barfi; Avinash Das Sahu; Robert M. Samstein; Christian M. Schürch; Debattama R. Sen; Daniela S. Thommen; Yochai Wolf; Roberta Zappasodi
Review
Priority Brief
Spatial UMAP and Image Cytometry for Topographic Immuno-oncology Biomarker Discovery
Nicolas A. Giraldo; Sneha Berry; Etienne Becht; Deniz Ates; Kara M. Schenk; Elizabeth L. Engle; Benjamin Green; Peter Nguyen; Abha Soni; Julie E. Stein; Farah Succaria; Aleksandra Ogurtsova; Haiying Xu; Raphael Gottardo; Robert A. Anders; Evan J. Lipson; Ludmila Danilova; Alexander S. Baras; Janis M. Taube
Research Articles
The Fibronectin–ILT3 Interaction Functions as a Stromal Checkpoint that Suppresses Myeloid Cells
Kevin J. Paavola; Julie M. Roda; Vicky Y. Lin; Peirong Chen; Kyle P. O'Hollaren; Richard Ventura; Suzanne C. Crawley; Betty Li; Hung-I H. Chen; Seth Malmersjö; Nikolai A. Sharkov; Geoffrey Horner; Wei Guo; Alan K. Kutach; Kalyani Mondal; Zhen Zhang; Joshua S. Lichtman; Christina Song; Lee B. Rivera; Wenhui Liu; Jian Luo; Yan Wang; Mark J. Solloway; Bernard B. Allan; Avantika Kekatpure; Shelley R. Starck; Raj Haldankar; Bin Fan; Chun Chu; Jie Tang; Martina Molgora; Marco Colonna; Daniel D. Kaplan; Jer-Yuan Hsu
In this study, the fibronectin–ILT3 interaction is shown to represent a “stromal checkpoint” through which the extracellular matrix actively suppresses tumor-associated myeloid cells. Therapeutics targeting this interaction can potentially reprogram suppressive myeloid cells, increasing antitumor immune responses.
Targeting the Atf7ip–Setdb1 Complex Augments Antitumor Immunity by Boosting Tumor Immunogenicity
Hai Hu; Alireza Khodadadi-Jamayran; Igor Dolgalev; Hyunwoo Cho; Sana Badri; Luis A. Chiriboga; Briana Zeck; Miguel Lopez De Rodas Gregorio; Catríona M. Dowling; Kristen Labbe; Jiehui Deng; Ting Chen; Hua Zhang; Paul Zappile; Ze Chen; Beatrix Ueberheide; Angeliki Karatza; Han Han; Michela Ranieri; Sittinon Tang; George Jour; Iman Osman; Antje Sucker; Dirk Schadendorf; Aristotelis Tsirigos; Kurt A. Schalper; Vamsidhar Velcheti; Hsin-yi Huang; Yujuan Jin; Hongbin Ji; John T. Poirier; Fei Li; Kwok-Kin Wong
Arginase 1–Based Immune Modulatory Vaccines Induce Anticancer Immunity and Synergize with Anti–PD-1 Checkpoint Blockade
Mia Aaboe Jørgensen; Stefano Ugel; Mie Linder Hübbe; Marco Carretta; Maria Perez-Penco; Stine Emilie Weis-Banke; Evelina Martinenaite; Katharina Kopp; Marion Chapellier; Annalisa Adamo; Francesco De Sanctis; Cristina Frusteri; Manuela Iezzi; Mai-Britt Zocca; Daniel Hargbøll Madsen; Ayako Wakatsuki Pedersen; Vincenzo Bronte; Mads Hald Andersen
Characteristics of Immune Memory and Effector Activity to Cancer-Expressed MHC Class I Phosphopeptides Differ in Healthy Donors and Ovarian Cancer Patients
Amanda M. Lulu; Kara L. Cummings; Erin D. Jeffery; Paisley T. Myers; Dennis Underwood; Rachel M. Lacy; Kimberly A. Chianese-Bullock; Craig L. Slingluff, Jr; Susan C. Modesitt; Victor H. Engelhard
CD8+ T–cell Immune Surveillance against a Tumor Antigen Encoded by the Oncogenic Long Noncoding RNA PVT1
Yasuhiro Kikuchi; Serina Tokita; Tomomi Hirama; Vitaly Kochin; Munehide Nakatsugawa; Tomoyo Shinkawa; Yoshihiko Hirohashi; Tomohide Tsukahara; Fumitake Hata; Ichiro Takemasa; Noriyuki Sato; Takayuki Kanaseki; Toshihiko Torigoe
β2-Integrin Adhesion Regulates Dendritic Cell Epigenetic and Transcriptional Landscapes to Restrict Dendritic Cell Maturation and Tumor Rejection
Carla Guenther; Imrul Faisal; Manlio Fusciello; Maria Sokolova; Heidi Harjunpää; Mette Ilander; Robert Tallberg; Maria Kristina Vartiainen; Ronen Alon; Jose-Maria Gonzalez-Granado; Vincenzo Cerullo; Susanna Carola Fagerholm
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